LOCUS       XM_039087484             899 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus photoreceptor disc component (Prcd),
            transcript variant X5, mRNA.
ACCESSION   XM_039087484
VERSION     XM_039087484.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..899
                     /gene="Prcd"
                     /note="photoreceptor disc component; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 34 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100912216"
                     /db_xref="RGD:6488422"
     CDS             226..387
                     /gene="Prcd"
                     /codon_start=1
                     /product="photoreceptor disk component PRCD isoform X1"
                     /protein_id="XP_038943412.1"
                     /db_xref="GeneID:100912216"
                     /db_xref="RGD:6488422"
                     /translation="MCTTLFLLSVAMLWRRRFTNRVEPEPSRVDGTVVGSSSETDFQA
                     TSREKEPVT"
ORIGIN      
        1 attctggata ggcactcggg gtcaccttgc atgtcttgaa ggaggctggc ttactctgcc
       61 actaggaggg gagatcttgg gcctgcttga atctcctaat cccttcccag gaacttcagg
      121 aaacacagcg gtggcttggg agaggcggcc tggccattgt gggccccctg gcctgtggcc
      181 ttcttcagca gggttggtcg tcggtgggga tggggcagct gaaccatgtg caccaccctc
      241 ttcctgctca gcgtggccat gctgtggcgc cgtagattta ccaaccgagt cgaaccagag
      301 cctagcagag tggatgggac agtcgtgggc agcagctcgg aaacagactt tcaagctacc
      361 agcagggaga aagaacctgt gacataggcc ttcccttctt caggcagctc ggctttgggg
      421 actgcaaccc atcagctctg acagctcagt ccttgctggt tcacctccca tcccaggagg
      481 atgctgtgtg gctggaggca gcagcaggag ggaaagcagg agaagcagtc atggagaagt
      541 ccatcttcac agggatttgg ctcttgccct gaagggagcc tcacagattc cagacggctg
      601 cacaagtcaa agcatcacgc ctctacagtg tcccagagcc aggagagagg ctgttgtttt
      661 taaaggcaag aagaattccc caaacttggc cagaatcgga gacaagatgg agggagaacc
      721 actttccagg ccggccaccg acatgcccgc gtacagacac acttcctgtg aaaccacgga
      781 tgcagatgct ccaagcgtaa gcagccagcg tcttggaggt ttcaccagcc ctccttcctg
      841 atcttgttaa taaaatccaa ggttcccttt gcagtgaaga agggaacacc aatactgta
//
