LOCUS       XM_039092911            1446 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus PRAME like 53 (Pramel53), transcript
            variant X1, mRNA.
ACCESSION   XM_039092911
VERSION     XM_039092911.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086032) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1446
                     /gene="Pramel53"
                     /note="PRAME like 53; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 Proteins"
                     /db_xref="GeneID:100910292"
                     /db_xref="RGD:6499239"
     CDS             1..1446
                     /gene="Pramel53"
                     /codon_start=1
                     /product="PRAME family member 8-like isoform X1"
                     /protein_id="XP_038948839.1"
                     /db_xref="GeneID:100910292"
                     /db_xref="RGD:6499239"
                     /translation="MSVQSPPTLEKLAIQSLLRNEDVAMSSLGELPAVLFPALFKEAF
                     TGKHINFVKEMVASWPFPCLPVGALMKTPNLEMLQAVLDGVDMRLTRKFHPRGTKLQV
                     LDLRNMHHYFWNIQAGEEDSSCSAENLKEKKVMKVFHRYALRKRVKVIVDLYICSCLK
                     EEQTCLLKWAQQRKGSLHFCCTKMKVWNLPVCVIREILKVFDPQHITELELHTEWTLL
                     ELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGIGDREAKCIKKFISQFSKFNCLQHL
                     CMFCVHFLGDHMNQVLGCLMTPLETLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGV
                     VLCDLDIMPLRGLLEKVADTLETLDLQWCRMTDSQLYALLPALRHCCHLTTVNFYSNN
                     FSVPILKDLMQHTANWSRIRVEQYPAPLECYDDLAQVSVERFAELSSELMYTLGVIRQ
                     TKNISFATDICHTCGQRCVYHNGCRLCCCWH"
ORIGIN      
        1 atgagtgttc agagcccacc cacactcgag aagctggcaa ttcagtctct gctaagaaat
       61 gaagatgtgg ccatgtcctc tctgggagag ctgcctgctg tgctcttccc agcactgttc
      121 aaggaggcct tcactggaaa acacatcaac ttcgtgaagg aaatggtggc atcttggcct
      181 tttccctgtc tccctgtggg tgcattgatg aagacaccta acctggaaat gttgcaggct
      241 gtgctggatg gagtagacat gcgactgaca agaaagtttc accccagggg aacaaaactg
      301 caggttctcg acctgagaaa tatgcaccat tatttctgga acatacaggc tggagaagaa
      361 gatagcagct gttcagcaga gaacttgaaa gaaaagaaag tcatgaaagt ctttcacaga
      421 tatgcactaa ggaaacgtgt gaaggtcata gttgatctgt acatctgttc ctgcctgaag
      481 gaagaacaaa catgcttgtt gaagtgggcc cagcagagaa agggctccct acatttctgc
      541 tgtacaaaga tgaaggtctg gaatctacca gtctgtgtta tcagagagat cctgaaggtt
      601 tttgatccac agcatatcac agaattagaa ctgcatactg agtggactct gttagagctg
      661 gcacattttg ctccctactt tggacagatg agaaatctcc agaaagcctt cctggcaccc
      721 ctgcacagga tcatgttctc taatagcaat ggaataggag acagagaagc caagtgtatc
      781 aagaagttta tatctcagtt ctccaaattc aattgtctcc agcatctctg catgttctgt
      841 gtccattttc ttggagatca catgaatcaa gtcctagggt gcctgatgac tcccttggag
      901 actctttcaa tcacatacta cctaatttca cagaaagact tggattccct atcccgcagt
      961 caaagccttt ttcagctcaa acatctggat ttgagaggag tggtcttatg tgatctggat
     1021 attatgcctc tgagaggtct cctagagaaa gtggcagaca ctcttgagac tctggatttg
     1081 cagtggtgta ggatgacaga ctcccagctt tatgccctcc tacctgccct cagacattgc
     1141 tgtcatctca ccacggtcaa cttctacagc aataacttct ccgtgcccat tctgaaggat
     1201 ctgatgcagc acacagccaa ctggagcagg atccgtgtgg aacagtaccc tgcccctctg
     1261 gagtgctatg atgacttggc tcaagtttct gtagaaagat ttgccgaact ttcttctgag
     1321 cttatgtata ctctcggggt aataaggcag accaagaaca tctcctttgc tacagatatc
     1381 tgccatacat gtggtcagcg ctgtgtctat cacaatgggt gcagactttg ttgttgctgg
     1441 cactaa
//
