LOCUS       XM_039111563            1774 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus PRAME like 18 (Pramel18), mRNA.
ACCESSION   XM_039111563
VERSION     XM_039111563.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1774
                     /gene="Pramel18"
                     /note="PRAME like 18; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:685946"
                     /db_xref="RGD:1587828"
     CDS             90..437
                     /gene="Pramel18"
                     /codon_start=1
                     /product="PRAME family member 14-like"
                     /protein_id="XP_038967491.1"
                     /db_xref="GeneID:685946"
                     /db_xref="RGD:1587828"
                     /translation="MSSYNAPTLMQLEVEALLKKDAIDISDLEDLPTMVFPPLFIEAF
                     NRRNTKLLQAMVVAWPFPYLTVGPLLKTASVEMMKTVLDCIDILLTQKDHSRRWKLQV
                     LDLRDEHQDFWDV"
ORIGIN      
        1 gaaccgtgga gtcactactt ggtcctgctg gagtggtttc ctgtagccag agtccatagc
       61 aggttcggtc tgactgaata tatatcagga tgagcagcta caatgctccc acactcatgc
      121 agctggaagt ggaggctctg ctgaagaagg atgccataga catctctgat ctggaagacc
      181 tgcccactat ggtcttccca ccactcttca tagaggcctt caaccgcaga aacacaaaac
      241 tcttacaggc aatggtggtg gcctggccct ttccctacct cactgtgggg ccactgctga
      301 aaaccgccag tgtggagatg atgaaaactg tgctggattg catagatata ctgctgacac
      361 agaaggatca ttccaggagg tggaagcttc aagtgttgga cttgagagat gagcaccagg
      421 atttctggga tgtatgaact ggaagagaat atggagactt cacagcagac tcttggagca
      481 cgaagcaagt tcctaagagc cttcctactt gtgtaccaag gcagcatttg caggtggtca
      541 ctaacctgag cctctgcttc tatctgaaca aacaccagaa atgcttgctg cagtgggccc
      601 agaaaagaat agacgttttg cagctatgct gtgtgaagat gtcgattttt gccttaccac
      661 aggagatcat caaggaggtc ttgaacattg tccagccaaa ctatattgag gaattggaaa
      721 tacacacaca ggaggtctgg tccttcctgg atttctttgc acatttcctt ggccagatga
      781 gaaatcttct caaatttgat ctaaatcaaa tagacttcaa acataatgtt gtggacacag
      841 tgacagatgt aaaaaagtat gctgacaaat tcttttctca gttctcccaa cttagacatc
      901 tccagcatct cttcatgaat ggtgcccact ttgccaatga caacatgaaa gagctcttag
      961 gtaagcaagg atgctgagct gtttatgctc tggtagcata actttccctt tatttggagc
     1021 attagtgtta acctggggtg tgccagtcac agaggatgtt acaatgacag acacattaca
     1081 ggagtaatac aactgagggt tgattgtttc ttaaccgacc tcacttggtt caattcccat
     1141 ttgaatagca cagtctgagc tggggtaggg gatattgaga gagctgccct gcaaacacgc
     1201 ccaatgtgtg cttcacttgg atcttctttg agatccatgt acagttacat gagggaaaaa
     1261 aaaaaagccg atggccataa gatgggaagt ctgcacacct gctctctaca aagatacatg
     1321 tgaacaggta ccagcttttc ctcttttgga gtcaatcaac ctctaattct ccctaaaagg
     1381 gagaacaaaa gtaaggacta agtggataga cactgggctc caggtcatca aattcaagag
     1441 tggaaaatta aatcaggaat acagattgtg gacataacag atatagataa actctgcagg
     1501 acattagcta agatgttgcc agaaactttc tgtgataatc ctttctagtt atgttctcct
     1561 aacatgatgg gcaagctcta gttctctgac agagtgtcga tggtgagttt cagatctctg
     1621 tgctgagccc atctcaccag atagtaatat gcatcagtag acaatacttt gagcagaaac
     1681 aaacatgcag cacactaaga tttgagcttc accgtaagca tagattgact ctacatgtct
     1741 ggcttctctg ggtcagtgtc aatcttacta atgt
//
