LOCUS       NM_001135782            3279 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus PRAME family member 8 (Pramef8), mRNA.
ACCESSION   NM_001135782 XM_039110670 XM_578504
VERSION     NM_001135782.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On or before Jul 26, 2021 this sequence version replaced
            XM_039110670.1, NM_001135782.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.21680.1,
                                           SRR26643296.16641.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-155               JAXUCZ010000005.1  161061444-161061598
            156-468             JAXUCZ010000005.1  161072846-161073158
            469-1056            JAXUCZ010000005.1  161073594-161074181
            1057-3279           JAXUCZ010000005.1  161075000-161077222
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..3279
                     /gene="Pramef8"
                     /gene_synonym="RGD1564061"
                     /note="PRAME family member 8"
                     /db_xref="GeneID:502994"
                     /db_xref="RGD:1564061"
     exon            1..155
                     /gene="Pramef8"
                     /gene_synonym="RGD1564061"
                     /inference="alignment:Splign:2.1.0"
     exon            156..468
                     /gene="Pramef8"
                     /gene_synonym="RGD1564061"
                     /inference="alignment:Splign:2.1.0"
     CDS             182..1624
                     /gene="Pramef8"
                     /gene_synonym="RGD1564061"
                     /codon_start=1
                     /product="PRAME family member 8"
                     /protein_id="NP_001129254.1"
                     /db_xref="GeneID:502994"
                     /db_xref="RGD:1564061"
                     /translation="MSAQDSPTLLKLAVLRLLKDEALAVSSLQYLPRALFPLLFKEAF
                     NHRQTNVLRAMVAVWPFPFLPLGTLMKTPHLEILQAVLDGVDMLWTQKVLPRRRKLQV
                     LDLRNVHHDFWDVWVGPEDGGRSAEAVCEEQTAKRLHRYVLRRRLKVVTDLCLRFHLN
                     EHQAYLLQWAQQRRSSIRLCCVKMQIWALPAYTVRKVLMVFQPDSIQELELNTGWSLS
                     TLVHFASYLDQMRNLQKLLITRIHKNTFKVLNTSSDIQKCITKFVSQFSKLNSLQHLS
                     MNGIYFSSEHMKQLFRYLKTPLETLSITMCKLSHLDLSSLSQSQSLHQLKHLNLRLVK
                     LIDLRPVPFHDLLRSVADTLQTLELEGCWMVDSQLIALLPALSQCSQLTRVNFYDNDI
                     SMAVLKDLLYHTANLSQLTQELYPAPLECYDDTGDVLMGRFVQLCPELMETLMTIRQP
                     KRVSFATYICHECCQRCVYDLETKLCRCRQ"
     exon            469..1056
                     /gene="Pramef8"
                     /gene_synonym="RGD1564061"
                     /inference="alignment:Splign:2.1.0"
     exon            1057..3279
                     /gene="Pramef8"
                     /gene_synonym="RGD1564061"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagacgggat acggataaaa acgcttcagg ccggaagttt gaagtgaaga tggataaaaa
       61 tgctccagag aagctcggga agatagtcac agccttggag tccgagcttg gagtgactgc
      121 ctgggcttgc tgggattctg agttctgtca tcagtgttcc ttcagactga agatttgaag
      181 gatgagtgcc caggactcac ccacactgct gaagctggca gtactgagac tactgaagga
      241 tgaggccctg gccgtctctt ctctgcagta cttgcccagg gctctcttcc cactattgtt
      301 caaggaagcc ttcaatcaca gacaaactaa tgtcctgagg gccatggtgg cagtgtggcc
      361 ctttcccttt ctccctctgg ggaccctgat gaagactccc cacctggaga tcttgcaggc
      421 tgtgctggat ggagtagaca tgctgtggac acagaaggtt cttcccagaa ggcggaagct
      481 tcaagtgctg gacctgagga atgtgcacca tgacttctgg gatgtttggg ttggaccaga
      541 ggatggaggc cgctcggcag aggctgtgtg tgaagagcag acagcgaagc gccttcacag
      601 atacgtactg aggcggcgtt tgaaggtggt cactgacctc tgcctcaggt tccacctgaa
      661 cgagcaccaa gcatacctgt tgcagtgggc ccagcagaga agaagttcca ttcggctgtg
      721 ctgtgtgaag atgcagattt gggctttgcc tgcgtacacc gtccggaagg tcttgatggt
      781 gttccagcca gacagcatcc aggagttgga actcaataca ggttggagtc tctccactct
      841 ggtgcatttt gcatcttacc tggaccagat gagaaaccta cagaagctcc ttataacacg
      901 gattcacaag aacaccttca aggtactaaa tacctcctcg gacatacaga agtgtatcac
      961 caagtttgtt tctcagttct ccaaactcaa ctctctccag catctctcca tgaacggcat
     1021 ctacttttcc agtgagcaca tgaaacagtt gttcaggtac ctgaagaccc ctttggagac
     1081 cctgtccatc acaatgtgca agctttcaca tttagacttg agttccttgt cccagagtca
     1141 gagcctccat caactcaaac acctgaatct gaggcttgtg aaattaattg acttacgtcc
     1201 tgtgcctttc catgatctcc taaggagtgt tgcagacact ctgcagaccc tagaattgga
     1261 gggctgttgg atggtagact cgcagctcat tgccctcctg cctgccctga gccagtgctc
     1321 ccagctcacc agggtcaatt tctatgacaa tgacatctcc atggctgttc tgaaggacct
     1381 tctgtatcat acagccaatc tgagccagct tacccaggag ctgtatcctg cccctttgga
     1441 gtgctatgat gacacaggtg atgtccttat gggaagattt gtccagcttt gtcctgagct
     1501 catggagaca cttatgacta taaggcagcc caagagagtc tcctttgcta cgtatatctg
     1561 ccatgaatgt tgtcagcgct gtgtctatga cctggagacc aaactttgtc gttgtcggca
     1621 atgaatggtt tgcttttgat actgagaaat gaaagcctag gaacaggtct ttcatcaaga
     1681 gaacccaaag catatggccg cacaatgctc actgtttggg aacccaaatg gtgtgcagta
     1741 gggctagact gcaaacacaa cttacgaaga gcaatgggac ccaggacaga tgtttatgga
     1801 atcaaaagac aatcctacat ttcttttctt tcattctttc ttcctttttt tcctttaaga
     1861 tttatttatt ttatacgtgg gtggtttacc tgcatatatg tgtccttggt gcctgtagaa
     1921 ttcagatgtg ggcatcgagt cccctggatc ttgagtttgg gatggttgtg aaccatcaca
     1981 agtcttctgc aagaacaagt attcttgatt ggtgagccat ctctccggcc ccagatctgc
     2041 actttctaaa taattgagtt ctgtgaggac atgataatga atgactttct ctttcctaca
     2101 tggtagttgt aaagtaaaat ggccaaattt tagatgttgt ggtgtccttc tcagccatta
     2161 acctggtttt ggtgttgcta ttttcctgtg gtttaagctg gaaagaccct gtgctgtctg
     2221 acctctcacc caagatctgt agacatctgt gacagcaaac ctggttgtca acttgactac
     2281 atctgtaaca actagaactc aagatgctgg atatccccat gaggtatgat caccttctct
     2341 gggcagcatt tgtaaagagg aagaaggaag ccgtgctgcc aagtttgtct gtcctccttc
     2401 tttgggcagt attcattttc ttcaggattt caacatagac tgaaaaacca gtagctctcc
     2461 aggagcctag gattatagca ctagattggg actgcagaga catccagctt tgtagatgaa
     2521 caactcccag atccttggcc ttttcattgt aagccagcca ttgtcagact gtgtagacct
     2581 cactcggtaa gccagtctaa tatacctcat gttctggata catacggagc catcagttct
     2641 gctcctttag cctttggaga accctgacta ctacagtttc aaagtaaacc gaaagcagtc
     2701 agatgtcttc cctcctttac ttttgcctgc gcatctgtta cagtgcactt gtgtgtctgc
     2761 ttatttcttt agtgtacaaa atttcaacct aaactgagca gtgcattctc ctgtgagggg
     2821 tttggggaat ggtagaggaa ttcagtctag aacacttaga ctaggaggta ctgtgggcat
     2881 accagagatg gccaaagcaa agtcagagat aacacagagc agaggcaatg gggtctaagc
     2941 cacattgctt attactcttt atatttctct ctttcatggt catatattgc ccagtctggc
     3001 cttgaaatcc tcctgtctcc accttcctga agtatggcac cttggagagc ctgtaggcac
     3061 atgtaagacc ctagttttca gggcttccag tctctggctg tcccttcaaa aataaaggtc
     3121 tccagtagat gtccctgtcc cccaaaggat tgacaggcct taagaactac attgtagatg
     3181 tccaggagta aactatttta ttttgttaat aagtattaag cctagccatt gcactcctgt
     3241 gtataatctg gttcaataaa gaattttgtt tcataccca
//
