LOCUS       XM_006239346            1475 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus PRAME family member 12 (Pramef12),
            mRNA.
ACCESSION   XM_006239346
VERSION     XM_006239346.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006239346.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006239346.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1475
                     /gene="Pramef12"
                     /note="PRAME family member 12; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 2 Proteins, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:691157"
                     /db_xref="RGD:1587431"
     CDS             5..1414
                     /gene="Pramef12"
                     /codon_start=1
                     /product="PRAME family member 12"
                     /protein_id="XP_006239408.1"
                     /db_xref="GeneID:691157"
                     /db_xref="RGD:1587431"
                     /translation="MSLQATPTLLQLAMQSLLRDEAVAISALPDLPMELFPPLFKDAL
                     THKRSNILRRMVQVWPFPCLPLGGLMKMKAPYLDVLQTILDGIDGLLDQNIHPSNYRL
                     RILDLRALHKTFWTVWAGDKTASCISEAKCRRRSQRRGLETVAKPESLKVFIDLCLKP
                     RALNACLSYVLLWARKRKALLQLGCKKLKINTIALQKNVKVLELLDLDCMEEVEVCCT
                     WKLSTLAIFAPYLGQMKNLLSLILSHIHVPASISPEEKNQLVSQFTSQFPNLQCLQEL
                     SLDSACFLKGHMDQVFRCLEAPLEMLSITDSQLSESDLKALSQCPGIYQLKHLNLSGV
                     ILTNINPEPLRVLLERVAATLRILDLENCMIKDSQLSVFLPALSQCVQLIMFNYLRNP
                     ISVAALESLLLHTSKLSCLGLEMYSTPWEIFGAQSDSYHKRLDELREELSKTMMHLEH
                     TRTVWFSVAPCLPNDNQVI"
ORIGIN      
        1 gagaatgagc ttgcaggcca cacccacact cctgcagcta gcgatgcaga gtctgctgag
       61 ggacgaggcc gtggccatct ctgctctgcc ggacctgccc atggagctct tcccaccact
      121 cttcaaggat gccctcaccc acaaacgatc taacatcctg aggaggatgg tgcaggtctg
      181 gccgtttccc tgtctcccac tgggtggtct gatgaaaatg aaggcaccgt acctggatgt
      241 cttacaaacc atactggatg ggattgacgg cctgctcgac cagaatattc accccagtaa
      301 ttaccgactt cgaattctgg atttgcgggc tttgcacaaa accttctgga ccgtgtgggc
      361 tggagataag acggcgtctt gcatttcaga ggccaagtgt aggagaaggt cacagaggag
      421 aggtctggaa acggtagcca agccagagtc attgaaagtg tttatagacc tgtgcctcaa
      481 gccgagagcc ttgaatgcat gcctgtccta tgtcctcctg tgggcgagaa agagaaaagc
      541 tttgctgcag cttggctgta agaagctgaa gatcaacacg atagctctcc agaaaaacgt
      601 gaaggttctg gaattgctag atctggactg tatggaggag gtggaagtgt gctgcacctg
      661 gaagctgtct actctggcca tctttgctcc ttacctgggc caaatgaaaa accttctctc
      721 actcattctc tctcacatcc atgtccctgc ctccatttcc cctgaggaga agaatcagtt
      781 ggtcagccag ttcacctctc agtttcccaa cctgcagtgc ctccaggagc tctccctgga
      841 ctctgcctgc ttcctcaaag gtcatatgga ccaggtgttc aggtgcctgg aggccccctt
      901 ggagatgctc tctatcactg attcccagct atcagaatca gacttgaagg ccctgtccca
      961 gtgtccaggc atctatcagc tcaaacacct gaacctgagt ggtgtcattc tgaccaacat
     1021 aaatcccgag ccccttcgag tcctgctgga gagagttgca gccaccctga ggatcctgga
     1081 tttggagaac tgtatgatta aggactccca actcagtgtc ttcctgcctg ccctgagcca
     1141 atgtgttcag ctcatcatgt tcaactactt aaggaacccc atctcagtgg ctgccctgga
     1201 gagcctgctt ctccacacct ccaagctgag ctgcctaggc ttagagatgt actctacccc
     1261 ttgggagatt tttggtgccc agagtgattc ctatcataag aggctagatg agcttcgaga
     1321 ggagttgagc aagacaatga tgcatctaga acacaccagg accgtctggt tcagcgtcgc
     1381 accctgtctt cctaatgaca accaggtcat atgagtcaga gtgcaagctt catcaaggct
     1441 gttccctcag tgggtacttg ggtggcaagt aattc
//
