LOCUS       XM_003749786            1271 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus protease-associated domain containing
            1 (Pradc1), transcript variant X1, mRNA.
ACCESSION   XM_003749786
VERSION     XM_003749786.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003749786.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003749786.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1271
                     /gene="Pradc1"
                     /note="protease-associated domain containing 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     95 samples with support for all annotated introns"
                     /db_xref="GeneID:686393"
                     /db_xref="RGD:1583112"
     CDS             329..895
                     /gene="Pradc1"
                     /codon_start=1
                     /product="protease-associated domain-containing protein 1
                     isoform X1"
                     /protein_id="XP_003749834.1"
                     /db_xref="GeneID:686393"
                     /db_xref="RGD:1583112"
                     /translation="MSRGAAGWCCLVLWLPTCVAAHGLRIHDYLYFQVLSPGDIRYIF
                     TATPAKDFGGIFHTRYEQIHLVPAEPPEACGELSNGFFIQDQIALVERGGCSFLSKTR
                     VVQEHGGRAVIISDNAVDNDSFYVEMIQDSTQRTADIPALFLLGRDGYMIRRSLEQHG
                     LPWAIISIPVNVTSIPTFELLQPPWTFW"
ORIGIN      
        1 ggcggggtca tcgagtttcg ttgtgctttt ggtctgggag ggtgcagtaa ggtcccacct
       61 tcagcccgcg tacccaggca ccatggtaga cgtgcaatga aatgtcaaca ctgaacaccg
      121 gctgtgagaa gcaccttagg aagtggccta aggcgcagag gcggaaagtg cggccacacg
      181 aacagacgtg gaggccaatc agccgccggc ctccgttccg cgctccaacc ggcgcggaga
      241 gcgggcctcg gggaggccgt ggcagctgtc aggctaaagt ccggcgagag atcgcggcgg
      301 gacggcggcg gcgggaccgg ccctggagat gagccgtggt gccgcgggct ggtgctgtct
      361 cgtgctttgg ctgcccacgt gcgtcgcggc ccacggctta cgcatccatg actacttgta
      421 cttccaagtg ctgagtcctg gggacattcg gtacatcttc actgccacgc ctgccaagga
      481 ctttggtggc atatttcaca cacggtatga acagattcac ctcgtccctg ctgaacctcc
      541 agaggcctgc ggggaactca gcaacggctt cttcatccag gaccagatcg ctctggtgga
      601 aagggggggc tgctccttcc tctctaagac cagggtggta caggagcatg gtgggcgggc
      661 tgtgatcatc tcggacaatg ccgttgacaa tgacagcttc tatgtggaga tgatccagga
      721 tagtacccaa cgcacagctg atattcctgc cctcttcctg ctcggccgag atggctacat
      781 gatccgacgc tctctggaac agcatgggct accatgggct atcatctcta tcccagtcaa
      841 tgtcaccagc attcctacct ttgagctgct gcaacctcca tggactttct ggtagaaaag
      901 ctgaccccag gttccagcga caagtgactc tcgggaagag gaaacccaag attctgctat
      961 atggagtttg gagatagata ctgaggacaa gtggagccag ggagaggaca aggagcccat
     1021 attcctgact gtcccttccc tagggcctac aaggacatct catgcttcaa gaggcttctg
     1081 gctagaattt ggaaaaagtg ctgaaggcag gtggccctga cacataacgc ctgttccagc
     1141 ttccagaagc caggccttgt cacagggagc cttgtagctg ttgctgaagt ggcttaaaga
     1201 agtggtcttt ggggactaat aaattagcac ctactttcag caataaagcc aaataaagct
     1261 catcagattt g
//
