LOCUS       NM_001106406            2453 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus peptidylprolyl isomerase domain and WD repeat
            containing 1 (Ppwd1), mRNA.
ACCESSION   NM_001106406 XM_001056962 XM_001064128 XM_001064235 XM_215474
VERSION     NM_001106406.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Davis TL, Walker JR, Campagna-Slater V, Finerty PJ, Paramanathan R,
            Bernstein G, MacKenzie F, Tempel W, Ouyang H, Lee WH, Eisenmesser
            EZ and Dhe-Paganon S.
  TITLE     Structural and biochemical characterization of the human
            cyclophilin family of peptidyl-prolyl isomerases
  JOURNAL   PLoS Biol 8 (7), e1000439 (2010)
   PUBMED   20676357
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Jurica MS, Licklider LJ, Gygi SR, Grigorieff N and Moore MJ.
  TITLE     Purification and characterization of native spliceosomes suitable
            for three-dimensional structural analysis
  JOURNAL   RNA 8 (4), 426-439 (2002)
   PUBMED   11991638
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473955.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001056962.1, XM_215474.4, XM_001064128.1, XM_001064235.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q13"
     gene            1..2453
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /note="peptidylprolyl isomerase domain and WD repeat
                     containing 1"
                     /db_xref="GeneID:294711"
                     /db_xref="RGD:1310204"
     exon            1..334
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     CDS             139..2079
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /EC_number="5.2.1.8"
                     /codon_start=1
                     /product="peptidylprolyl isomerase domain and WD
                     repeat-containing protein 1"
                     /protein_id="NP_001099876.1"
                     /db_xref="GeneID:294711"
                     /db_xref="RGD:1310204"
                     /translation="MAAEIGSDSQLKRRRRRDPEGSEKTELSEREPALAVEGREENDD
                     ENEERWVGPLPVEATLAKKRKVLEFERVYLENLPSASMYERSYMHRDVITHVVCTKTD
                     FIITASHDGHVKFWKKIEEGIEFVKHFRSHLGIIESIAVSSEGALFCSVGDDKAMKVF
                     DVVNFDMINMLKLGYFPGQCEWIYCPGDAISSVAASEKSTGKIFIYDGRGDNQPLHIF
                     DKLHVSPLTQIRLNPVYKAVVSSDKSGMIEYWTGPPHEYKFPKTVNWEYKTDTDLYEF
                     AKCKAYPTSICFSPDGKKIATIGSDRKVRIFRFLTGKLMRVFDESLSMFTELQQMRQQ
                     LPDMEFGRRMAVERELEKVDAVRLINIVFDETGHFVLYGTMLGIKVINVETNRCVRIL
                     GKQENIRVMQLALFQGIAKKHRAAATIEMKASENPVLQNIQADPTIVCTSFKKNRFYM
                     FTKREPEDTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIVHTSMGDIHIKLF
                     PVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEF
                     HSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISN
                     VKVNPKTDKPYEDVSIINITVK"
     exon            335..437
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     exon            438..538
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     exon            539..659
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     exon            660..1107
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     exon            1108..1298
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     exon            1299..1488
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     exon            1489..1670
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     exon            1671..1752
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     exon            1753..1935
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
     exon            1936..2453
                     /gene="Ppwd1"
                     /gene_synonym="RGD1310204"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctggttgct gattggatcg gcggggccca ccgtagcaaa tcagaatatg cgcccagccg
       61 tgacaacaaa atactgcgcc gcagatcggg aaacagagtt cactcggttg tcgcatctgt
      121 tctgacgtat cagacagcat ggcggcagag attggtagcg attcgcagct gaagagaaga
      181 agacgccggg acccagaggg atcagaaaaa acggaactaa gcgagcgaga accggcactg
      241 gcagtggagg ggagagaaga aaatgatgat gagaatgaag agcgctgggt cgggccttta
      301 ccggtggaag caacactggc caagaagagg aaagttctag agtttgaaag agtctacctt
      361 gaaaatctcc ccagtgcatc catgtatgag cgcagttaca tgcaccgaga tgttatcaca
      421 catgtggtgt gcaccaaaac agattttatt atcactgcca gtcatgatgg gcatgtcaaa
      481 ttttggaaaa aaatagaaga aggaattgag tttgttaaac attttcgtag tcacctaggc
      541 atcatcgaga gcattgcagt tagctctgag ggagcattgt tctgttctgt tggtgatgat
      601 aaagcaatga aggtgtttga tgtggtaaac tttgacatga tcaatatgct gaagcttggc
      661 tattttcctg gacaatgtga gtggatatac tgcccaggag atgccatctc ttcagttgct
      721 gcttctgaga agagtacagg aaaaattttc atttatgatg gtcgaggaga taaccagcca
      781 cttcatattt ttgacaaact ccatgtatcc cctcttactc agataagact aaacccagtt
      841 tacaaagcag tggtgtcttc tgacaaatct ggaatgattg agtactggac tggaccaccg
      901 catgaatata aattccctaa aactgtgaac tgggagtata aaacggacac agatttatat
      961 gaatttgcca agtgtaaggc gtatccaacc agcatatgct tttcacctga tgggaagaaa
     1021 atagcaacca ttggatcaga cagaaaagtt agaattttca ggtttttaac tggaaaactc
     1081 atgagggtct ttgatgaatc gttaagtatg tttactgaac tgcagcagat gaggcaacag
     1141 ctaccagaca tggaatttgg ccgacgaatg gctgtagaac gtgagctgga gaaagtggat
     1201 gctgtaagat taattaatat cgtttttgat gaaaccggac acttcgtgct ctatggaaca
     1261 atgctgggca ttaaagtaat aaatgtagaa acaaatcggt gtgtgcggat tttaggcaag
     1321 caagagaaca ttcgagtgat gcaactggct ttgtttcagg gaatagccaa aaagcatcga
     1381 gctgcagcta ccatagagat gaaagcttcg gaaaaccctg ttctccagaa cattcaagct
     1441 gacccaacca tagtctgtac gtctttcaag aagaatcggt tttatatgtt taccaaacga
     1501 gaaccagaag atacgaaaag tgcagattct gacagagatg tttttaatga gaaaccttct
     1561 aaagaagaag tcatggcagc tactcaagct gaagggccga aacgagtttc cgacagtgcc
     1621 attgttcaca caagcatggg agacattcac atcaaacttt ttcctgttga gtgtcccaag
     1681 actgtagaaa atttctgtgt tcacagcaga aatggctatt acaatgggca tacattccac
     1741 cgcataatta agggcttcat gattcagaca ggagatccaa caggcactgg tatgggggga
     1801 gaaagcatat ggggaggaga atttgaggat gaattccact caacattacg acatgacaga
     1861 ccttacacac tcagcatggc caatgctgga tcaaatacaa acggatccca gttcttcata
     1921 acggtagtgc caacaccttg gcttgataat aagcacactg tgtttggccg agtgactaaa
     1981 ggaatggagg tggtgcagag gatttccaat gttaaagtca atcccaaaac cgataagcct
     2041 tacgaggatg tcagcatcat aaatatcact gtcaagtgaa ctgtgtttgt tacaatcaca
     2101 gagtacttaa aataacacga gactggttca catttaaaat ttgctgaata tgtaaatcat
     2161 ggttaaaaga tacaacactg tatttttgta tttttactta aaggtcattc ttttaaaact
     2221 gcctttgatt tttcttggaa tatttcagat cctgaggggt gacaaattga aatgtactaa
     2281 tttaaggcaa aaacattctt ttatcggtaa attctgatat tactcaaatt tggtattaaa
     2341 taatgggttg gcacacattt cttcatttta aaaacatgcc cttttaggtt tagtggtcct
     2401 tacaaaaaaa tatcaaaagg tatatattcc ttaatatcat acagtatcct ttc
//
