LOCUS       NM_001106363            5228 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus PPARG related coactivator 1 (Pprc1), mRNA.
ACCESSION   NM_001106363 XM_001065637 XM_215259
VERSION     NM_001106363.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5228)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473986.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_215259.4, XM_001065637.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..5228
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q54"
     gene            1..5228
                     /gene="Pprc1"
                     /note="PPARG related coactivator 1"
                     /db_xref="GeneID:294007"
                     /db_xref="RGD:1309688"
     exon            1..207
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..4971
                     /gene="Pprc1"
                     /note="peroxisome proliferative activated receptor, gamma,
                     coactivator-related 1; peroxisome proliferator-activated
                     receptor gamma, coactivator-related 1"
                     /codon_start=1
                     /product="peroxisome proliferator-activated receptor gamma
                     coactivator-related protein 1"
                     /protein_id="NP_001099833.1"
                     /db_xref="GeneID:294007"
                     /db_xref="RGD:1309688"
                     /translation="MAARRGRRDRVAPPPTGGPGPDPGGGVRGGGWASRSQAPHGTVG
                     SVSPAEQVHEEGDDSSFVSLSRLGPSLREKDLEMEELILQDETLLETMQNYMDASLIS
                     LIEDFGESRLSLEDQNEMSLLTALTEILDNADSENLSPFDTIPDSELLVSPRESSSLH
                     KLLNLSRTPPERDRIPAMDPLGPSAGSSRVSGVEMSLADSPWDFSPPPFLETSSPKLP
                     SWRSSRPRPRWSQSPPPQQRSDGEEEEEVAGFSGQMLDGELDNSVNTLDFPMHLACPE
                     EEDKSGAANVAVSAPGDESISSLSELVRAMHPYCLPNLTQLASLDAELQEQADDLTLP
                     EGCVVLEIVGQAATAGDDLEIPVVVRQIPSGSQSVLLDGSVGTDPALQLLMPAMEPGT
                     EDGVPKVAPCPDQELPLSSACLLEPRDIMESLAPKEPRNLPANASEGSQRVPRKGRKK
                     KKKEQPTACLEGCTRRLRSSSRGQSTVATEVNSQAGNLQKQPQEELQRETAAPQSRGK
                     PRAWARAWAAALEKTGSEDPEDQNAGQDSPAEEDVLELRPKLVETSQADPTLSLNDSA
                     RADSIPVNSVEGDSTAVDTAVPVDQASSCTELVGSLSGGPILSSPVLDDRTGVEPAVA
                     IPTSNHLSPADAILANPGTADPAPNGLAPGDPVLVKCRPTDPRRAAAAATAAQGPRPS
                     LEPSDHPKVITPEVKDAGGPLKVEGSTSATTQEARPRPLSLSEYRQRRRQRQIEAEDR
                     NSQPPAGKWPSLPETPKGLADIPCLVPSAPTKKTAPQRSPIAVPETCSVSVGSNPVSP
                     TPEPSASKLMVSTHSEQVSSHEMPLPVRLPPPTLQSMAPAGPTPSTVPTPLPFPPSLP
                     PLLPLPASGPGVPSLPPPPLQPPGLPVSMRQMPPDPYTQYAPVPPWPCYPSVSPSGYS
                     CLPPPPAMPIVSGTPGTYAVPPTCNVPWVPPPAPVSPYSSSSAYGSLGWGPGLQQPPF
                     WSTVSPPPLSSASTGRAVPPPSVEPSNSSAGPPEDTLPVPVTPSLSSRPASPIAPPAE
                     PTKLEAQPVPVSPQPKHKVSPVVQSPQIKVLPTLSAEGVAIGESESERLKPETQENRP
                     REKPISTATKAVLLPKQSTVAKLPAVHPARLRRLSFLPTPRAQGSEDVVQAFISEIGI
                     EASDLSSLLEQFEKSEAKKECPLPAPADSVAVGNSGSIDTPQEKKPLDRLHAPELANV
                     AGLTPPATPPHQLWKPLAAVSLLAKAKSPKSTAQEGTLKPEGITEAKPPAAACLQEGV
                     RGPSPVHVGSGDHDYCVRSRTPPKKMPALVISEMGSRWNVKRHQDITIKPVLSLGSAA
                     PPLPCTTTSQEPLDHRTSSEQADPSAPCFAPSTLLSPEASPCRNEMNTRTPSEPPDKQ
                     RSMRCYRKACRSASPPSRGWQGRRGRSSRSVSSGSSRTSEASSSSSVSSSSRSRSRSL
                     SPPNKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSRSRSPSVSPCRRSDRRRRYSS
                     YRSNDHYQRQRVLQKERAIEERRVVFIGKIPGRMTRSELKQRFSVFGEIEECTIHFRV
                     QGDNYGFVTYRYAEEAFAAIESGHKLRQADEQPFDLCFGGRRQFCKRSYSDLDSNRED
                     FDPAPVKSKFDSLDFDTLLKQAQKNLRR"
     exon            208..381
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            382..528
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            529..630
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            631..3487
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            3488..3541
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            3542..3599
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            3600..3670
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            3671..4388
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            4389..4526
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            4527..4593
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            4594..4715
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            4716..4867
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
     exon            4868..5228
                     /gene="Pprc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgggcgag gcggcgccgg cgatcagagc agcgctgggt gttcaggggc caagatggcg
       61 gcgcgccggg gacggagaga ccgagtcgcg ccgcctccga ctgggggccc gggtcctgac
      121 cctggcggtg gagtgcgcgg cggcggttgg gcgagtcgaa gtcaagcgcc gcatgggacc
      181 gtgggctccg tgagcccggc ggagcaggtc catgaggaag gagatgactc tagctttgtc
      241 agtctttctc gactgggccc atctctaagg gagaaagacc tggaaatgga ggaactgata
      301 ctgcaggatg agacactact agagaccatg cagaactaca tggacgcctc ccttatatcc
      361 ctcattgagg attttggaga gagcaggcta tctttggagg accagaatga gatgtcgctg
      421 ctcacagctc tgacggagat cttggacaat gcagattctg agaacctgtc cccgtttgat
      481 accattcctg attcagagct gctcgtgtct cctcgggaga gctcctctct gcacaagctg
      541 ctcaatctct ctcggacacc tccagaacgt gaccgcatcc ccgcaatgga ccctttgggg
      601 cccagcgcag gaagtagtcg ggtgagtggg gttgagatgt cccttgcaga ttctccgtgg
      661 gacttctctc cacctccttt cttggaaact tcttccccta agctgcctag ctggagatcc
      721 tcaagaccaa gacctcgatg gagtcagtct cctcctcccc agcagcgcag tgatggagag
      781 gaggaggaag aggttgccgg cttcagtggt cagatgcttg atggcgaact tgacaactcg
      841 gtgaatacct tggatttccc catgcacctg gcatgccctg aggaagaaga caagtcaggg
      901 gcagcaaatg tggcagtgtc agcacctggt gacgagagca tctcctcctt gagtgagctg
      961 gtacgggcca tgcaccccta ctgcttaccc aacctcaccc agttggcatc acttgacgct
     1021 gagcttcagg agcaggctga tgatctgaca ctgcctgagg gttgtgtggt gctggagatt
     1081 gtgggccagg cagccacagc tggtgatgac ctggagatcc cagtggtcgt gcggcagatt
     1141 ccttcaggat cccagtctgt gctcctagat gggtctgtag ggactgatcc tgccttgcag
     1201 ctactcatgc ccgccatgga gcctggaaca gaagatggtg tgcctaaagt cgctccttgc
     1261 cctgatcaag aattaccact gagctctgcc tgcttattgg agcccaggga catcatggag
     1321 tcattggccc ccaaggagcc tcggaaccta cctgccaatg caagtgaggg ttctcagaga
     1381 gttcccagaa agggtaggaa gaagaagaag aaggagcagc caacagcctg tttggaaggc
     1441 tgtaccagga ggctgaggtc atcttctcgt ggacagtcta ctgtggctac agaggtgaac
     1501 tctcaggcag gcaacttaca gaaacagcct caggaagagc ttcagagaga gactgcggcc
     1561 cctcagagca gagggaagcc acgggcttgg gctcgggcct gggcagctgc cttggagaaa
     1621 actgggtctg aagacccaga ggaccagaat gcaggacagg atagtcctgc tgaggaagat
     1681 gttctagaac tccgtcctaa gctggtggag actagccaag ccgaccccac gctctcacta
     1741 aacgactctg ctcgagctga ctccatccca gttaactctg ttgaaggtga ctccactgca
     1801 gtggacactg ctgtacctgt tgaccaggct tcatcttgta cagagctggt tggttctctc
     1861 tcaggaggcc caattctgag tagcccagtc ctagatgaca ggacaggagt tgaacctgca
     1921 gtggctattc ccacttcaaa tcacttgtct ccagctgatg ctatcctagc taacccaggg
     1981 acagctgacc ctgctccaaa tggcctggct ccaggagatc ctgtgctagt taagtgcaga
     2041 ccaactgatc ctagacgtgc agctgctgct gccactgctg ctcaggggcc tcgtccttcc
     2101 ctagagccct cagaccatcc taaggtcatc acccctgaag tcaaggatgc tggaggtcct
     2161 ctgaaggtgg aaggtagtac cagtgctaca acccaggaag ccagacctcg gcccctcagc
     2221 ctatctgagt accgtcaacg acggcggcaa cggcaaatag aagcagaaga caggaattct
     2281 cagcccccag ctggaaagtg gccaagtctc ccagagacgc ccaaagggct ggcagatatc
     2341 ccttgtcttg ttccatcagc cccaaccaag aagacagccc cacagagaag ccctatagct
     2401 gtaccagaga cttgttctgt atctgtgggt tctaaccctg tttcccctac tcctgagcca
     2461 tctgcaagca aacttatggt ttcaactcac tctgaacagg tgtcatctca tgagatgcca
     2521 cttccagtta gacttccccc tcctacattg cagtctatgg ctcctgctgg gcccacccct
     2581 tctacagtgc ccacgccatt gcctttccct ccgagcttac ctcctctgct tcctcttcct
     2641 gcaagtggtc ctggtgtccc cagcctgccc ccacctcctt tgcaacctcc tggacttcca
     2701 gtatcaatga gacaaatgcc acctgacccc tatactcagt atgcccctgt gccgccctgg
     2761 ccttgttacc cctctgtatc tccttctggc tattcttgtc tgcccccacc accagcgatg
     2821 cccatagtgt cgggtacccc tggtacctat gctgtacccc caacttgcaa tgtgccttgg
     2881 gtaccccctc ctgcaccagt ctcaccttat agctccagct ctgcctatgg gtcccttggg
     2941 tggggcccag ggttgcaaca gcctcccttt tggtctactg tttctccacc tccattgtct
     3001 tcagcctcta ctggtagagc tgttccccca cccagtgtgg aacccagtaa cagttcagct
     3061 ggtcctccgg aagatacact tcctgtgcca gtgacccctt ccctgagctc tcggccagcc
     3121 agccccatag ctccaccagc agaacctacg aagctggagg ctcagccagt gcctgtctct
     3181 ccccaaccga aacacaaagt gtcccctgtg gtacagagtc cccagatcaa ggttctacca
     3241 actctgtctg ctgagggcgt ggctattggg gaatctgaat cagagaggct aaagccggag
     3301 acccaggaga acagaccaag ggagaagcct atctctacgg ctacgaaggc tgttctgtta
     3361 ccaaagcaga gcactgtcgc aaaactgcct gccgtccatc cagcccggct aaggaggctg
     3421 tccttcctgc ccaccccacg tgctcagggt tctgaggatg tggtgcaggc attcatcagt
     3481 gagattggga ttgaagcatc agacctgtcc agtctgttgg agcagtttga gaaatcagaa
     3541 gccaaaaagg agtgtcctct cccggctcct gctgacagcg tggctgtagg aaactcaggc
     3601 agcattgaca ctccccagga gaagaaaccc ctagaccggt tacacgcccc agaactggcc
     3661 aacgtggcag ggctcacccc gccagctacc cctccccacc agttatggaa acccctggct
     3721 gctgtctcac tgttggccaa agccaaatct cctaaatcta ctgcccaaga gggaaccctg
     3781 aagcctgaag gaattacaga ggccaaacct ccagctgcag cctgcctcca agaaggggtc
     3841 cgtggcccta gtccagtcca tgtgggctct ggggaccatg actattgtgt ccgaagcagg
     3901 acacccccaa aaaagatgcc tgccctagtc atttcagaga tgggctctcg atggaatgtc
     3961 aagcgccatc aggacatcac tatcaaacct gtcttgtcat tgggctcagc tgccccccca
     4021 ctcccatgca caaccacttc ccaggaaccg cttgatcaca ggactagcag tgagcaggca
     4081 gatccgtcag cgccttgttt tgccccatcc accttgctgt ctcctgaggc ctcaccctgc
     4141 cggaatgaaa tgaacactag gactccctct gagcccccag acaagcagcg gtcaatgcgc
     4201 tgttaccgaa aagcctgcag atcagccagc cccccaagtc ggggctggca aggccgccgt
     4261 ggccgtagca gccgttctgt cagctctggg tccagccgga ccagtgaagc atcctcatcc
     4321 tcatcggtgt cttcctcatc ccggtcccgg tccaggtccc tctccccccc aaacaagagg
     4381 tggcgaaggt ccagctgcag ttcctctgga cggtccagaa gatgttcctc ctcttcctct
     4441 tcttcctcct cctcatcttc atcatccagt tccagaagcc ggtctccctc tgtgtcccct
     4501 tgcaggagaa gtgaccggag gcggcggtac agctcttacc gttcaaatga ccattaccaa
     4561 aggcagagag tactgcagaa ggagcgtgca atagaagaga gaagggtggt cttcattggg
     4621 aaaatacctg gccgcatgac tcggtcggag ctgaagcaga ggttctctgt ttttggagag
     4681 attgaggagt gtaccattca ttttcgtgtc caaggtgaca actatggttt cgtcacttac
     4741 cggtatgctg aagaggcatt tgcagccatt gagagtggcc acaagttgcg gcaggcagac
     4801 gagcagccct ttgatctctg ctttgggggc cgaaggcagt tctgcaagag gagttactct
     4861 gatcttgact ccaatcggga agactttgat cctgctcctg tcaagagcaa attcgattct
     4921 cttgactttg atactttgtt gaaacaggcc cagaagaacc taaggaggta accctgggct
     4981 ttcctccccc atccattttc tctggaggtg tccaacctct caaccccctc ccctactcta
     5041 ggggagagag ctgctagtgt ggaaagactt ttataaggaa atgaaaaaaa gttaaataaa
     5101 aatatgttaa atcgggattt ttaagtggta tttggttttt aataacaggt attgaacaaa
     5161 ttaacttggc tttatatgta aggtgggtct gaggggaaca tctaataaac atgaagtaga
     5221 gggaactc
//
