LOCUS       NM_001106789            3611 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus protein phosphatase 6, regulatory subunit 2
            (Ppp6r2), mRNA.
ACCESSION   NM_001106789 XM_001054912 XM_217014
VERSION     NM_001106789.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3611)
  AUTHORS   Schmid,E.M., Ford,M.G., Burtey,A., Praefcke,G.J., Peak-Chew,S.Y.,
            Mills,I.G., Benmerah,A. and McMahon,H.T.
  TITLE     Role of the AP2 beta-appendage hub in recruiting partners for
            clathrin-coated vesicle assembly
  JOURNAL   PLoS Biol 4 (9), e262 (2006)
   PUBMED   16903783
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474027.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_217014.4, XM_001054912.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: FQ211682.1, BC166525.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMD00132268, SAMD00132292 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..3611
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /note="protein phosphatase 6, regulatory subunit 2"
                     /db_xref="GeneID:300146"
                     /db_xref="RGD:1563990"
     exon            1..215
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            216..343
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            344..499
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            500..582
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            583..825
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     CDS             599..3367
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /note="SAPS domain family, member 2"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 6
                     regulatory subunit 2"
                     /protein_id="NP_001100259.1"
                     /db_xref="GeneID:300146"
                     /db_xref="RGD:1563990"
                     /translation="MFWKFDLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKL
                     LDFLCRQQCMEELVNLITQDPPQDMEEKVRFKYPNTACELLTCDVPQISDRLGEDESL
                     LNLLYDFLDQEPPLNPLLASFFSKTIGNLIARKTEQVIMFLKKKDKFISLILKHIGTS
                     ALMDLLLRLVSCVEPVVLRQEVLHWLNEEKVIQRLVELIHPHQDEDRQSNASQALCDI
                     IRLGRDQGSQLQETVEPDPLLTALESQDCVEQLLKNMFDGDRTESCLVSGMQVLLALL
                     EPRRVGTEGLVDSFSQGLERSYSVSSSILHGIEPWLKNFHQLLLNPPKKKAILTTIGV
                     LEEPLGNARLHGARLMAALLHTNTPSINQELCRLNTMDLLLDLFFKYTWNNFLHLQVE
                     LCIAAILSHAGREEQAEAGRSDGKVEPVQGSGDGGGKPETTPSITSPPENTMVTHLFQ
                     KCCLVQRILEAWEANDNTQAAGGMRRGNMGHLTRIANAVVQNLEQGPVQTHISEVIRG
                     LPAECRGRWESFVEETLMETNRRNTVDLAFSEYQIQQMTANFVDQFGFNDEEFADQDD
                     NINAPFDRIAEINFNIEADEDSPSAALFEACCSDRIQPFDDDEEDIWEDEETRCTARV
                     MARARFGAPHTSENYSKKAVGHGGQGRKTGSPTARNVPGLATPSSPTQKEGPRSESDS
                     AGTTWTAVFDEPVNPLSAASGAARDVGSSAWAAGPSVAEEKGWAKFTDFQPFCCSETG
                     PRCSSPVDMDHSNAEGGQSPGPEKAFGPTSPCAWNVCVTRKAPLVASDSSSSGGSDSE
                     DDEKAAGAVEALCAGHTGKASPPPRTAEAAAGRAECPDSTVLAPACPAPSEVTISPAV
                     ATIAPSKAGSPTATIVVSSSVATAVPPGPIMAVTTTAPAIVATLGTMTKDRKTDALPD
                     GAALNGPV"
     exon            826..1012
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            1013..1150
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            1151..1216
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            1217..1329
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            1330..1443
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            1444..1570
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            1571..1723
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            1724..1939
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            1940..2004
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            2005..2120
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            2121..2206
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            2207..2304
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            2305..2362
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            2363..2484
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            2485..2648
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            2649..2805
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            2806..2894
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            2895..3090
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            3091..3318
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
     exon            3319..3611
                     /gene="Ppp6r2"
                     /gene_synonym="RGD1563990; Saps2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccattttg gagcgatctc gcccgcggcc ccgagccggt cccgagcggg tcccgagcct
       61 cccgcccgct gcgccagagt ccgaaggcgc cgcgccgcgg ggccgggccc atatgcgtgc
      121 ggcccgctcc aggcggtccg cacttcacct ctgggagcgt cctggcctcc ctcgggcctc
      181 ggaggagtcg ccgcgacccc cagcctgcgg ggcaggtaaa ccaaccaaaa ctctttgcag
      241 aatgaaaaca ccttttttaa aattgcatgt atacaaaaga aagagcccaa atgcttttta
      301 ttttgcctga atacaagatt taaacaaggt attgccatag aagtctctac cacagcgcgt
      361 tctgttggac tctttcacgg aactatagga tcacatgggc agcacttgtg tttgattcta
      421 ccctctttct tccggtcggt tctgtcaccc tgggaaatag agaagcagaa cgtacggctc
      481 ctttcttcat tcactgctgg atcaatgtcc agggccaagg cagttttgtt tgtgtggatt
      541 tctgtttact gctgcatggt agaggctgcc gaaccccata agctctgtga ccaccatcat
      601 gttctggaaa tttgacttga ataccacgtc ccacgttgac aagctcctcg acaaggaaca
      661 tgtgacactg caggaattaa tggatgaaga tgacatcttg caagagtgta aggctcagaa
      721 ccagaagctg ctggacttcc tgtgcaggca gcagtgtatg gaggagctgg tgaacctcat
      781 cacacaagac ccaccccagg acatggaaga gaaggtccga ttcaaatatc caaacacagc
      841 ctgtgagctt ctgacttgtg atgtgccgca gatcagcgac agactaggcg aggacgagag
      901 tctgctgaac cttctgtatg acttcttgga ccaggagcca ccactcaacc ctctgcttgc
      961 cagttttttt agcaagacca ttggcaatct cattgcaagg aaaaccgaac aggtgatcat
     1021 gttcttgaag aagaaggaca agttcatcag tctgatactg aagcacatag gcacctcagc
     1081 tctcatggac ctgctgctac gcctggtcag ctgcgtggaa ccagttgttc tccggcagga
     1141 ggtcctacat tggcttaatg aagagaaagt catccagaga cttgtggaat tgatccatcc
     1201 ccaccaggat gaagataggc agtcaaatgc ttctcaggca ctctgtgaca tcatcaggct
     1261 gggcagagac cagggcagtc agctgcagga gactgtggag ccggatcccc tcctcacagc
     1321 actggagtcg caggactgtg tggaacagct tctgaagaac atgtttgatg gggatcggac
     1381 ggagagctgc ctggtcagtg ggatgcaggt gctgcttgcc ctgctggagc caaggcgtgt
     1441 tggaacagaa ggcttggtgg actccttttc tcagggactg gaaaggtcat actctgtcag
     1501 cagcagcatc ctgcacggca ttgagccatg gctgaagaat ttccatcagc tcctgctcaa
     1561 cccaccaaag aagaaagcaa tcctgaccac tattggcgtg ctagaggagc ccctggggaa
     1621 tgctcgtctt catggtgcac gcctcatggc tgcactgctg cacacaaata cgcccagcat
     1681 caaccaggag ctctgccggc tcaacaccat ggacttactg ctggacctgt tttttaagta
     1741 cacctggaat aacttcttac acttgcaagt ggagctgtgc atagccgcta ttctctccca
     1801 cgctggtcgg gaggagcagg cagaagctgg cagatcagat ggcaaagtgg aacctgtgca
     1861 ggggagtgga gatgggggtg ggaagccgga gaccaccccg tccatcacca gccctcctga
     1921 gaacacaatg gtgacccatc tgttccagaa gtgctgcctg gttcagagga tcctggaagc
     1981 ctgggaagcc aatgacaaca cacaggcggc aggtggcatg agacgtggga atatgggcca
     2041 cctcacaagg atcgccaacg cagttgtaca gaacctggag cagggcccgg tgcagacaca
     2101 catcagtgaa gtcatccgag ggctccctgc agagtgccgt ggacgctggg agagctttgt
     2161 ggaagagaca ctgatggaga ccaaccgcag gaacactgtg gacctggcct tctctgagta
     2221 ccagatccag cagatgacag caaactttgt ggatcagttt ggcttcaatg atgaggagtt
     2281 tgcagaccag gatgacaaca tcaatgcccc atttgaccgg attgcagaga tcaacttcaa
     2341 cattgaagcc gatgaggaca gtcccagtgc agctctgttt gaagcttgct gcagtgatcg
     2401 gatccagccc ttcgatgatg acgaggagga catttgggag gatgaggaga ctcgatgcac
     2461 ggcccgggtg atggccagag ccaggtttgg agcccctcac acctcagaaa actactcaaa
     2521 gaaggccgtg ggacatggag gccagggcag gaagactggc tcccccacag ctaggaatgt
     2581 gcctggactg gccacgcctt catcccctac acagaaagaa ggtcctcgct cagaaagtga
     2641 ttcagcaggt actacatgga cagcagtttt tgatgagcca gtgaacccgc tgtctgcagc
     2701 ctcaggagct gcgagggatg tgggttctag tgcatgggcg gctggtcctt cagttgcaga
     2761 ggagaaaggc tgggccaaat tcaccgactt ccagcctttc tgctgctctg agacagggcc
     2821 ccggtgcagc tctcctgtgg acatggacca cagcaatgcc gagggtggcc agagtccagg
     2881 cccagagaaa gcctttggtc ctacctcgcc ttgtgcctgg aacgtgtgtg tcactaggaa
     2941 ggccccactg gtagcctctg acagcagctc ctctggggga tctgacagtg aagatgacga
     3001 gaaggcagcg ggtgctgtgg aagctctgtg cgcaggccat actggaaagg cctccccgcc
     3061 acccaggaca gcagaggctg ctgctggcag ggccgagtgt cctgacagca ccgtgttagc
     3121 ccctgcctgc cctgctcctt cagaagtgac catcagtcct gccgtggcta ccatagcacc
     3181 aagcaaggca ggctctccca cagccaccat agtggtctct tcctcagtgg ctactgcggt
     3241 acccccagga ccaatcatgg cagtaaccac aacagctcca gccatagttg caaccctggg
     3301 gacaatgaca aaggacagga agacagatgc cctgccagat ggagctgcct taaatggccc
     3361 tgtgtaatgg ctgccgccca gctatggccc accctggtca ggctgcctcc ttaatcaaga
     3421 agactacctg gtgatgcaat tttttttaat ttaactttaa aataaatgct gcatttggta
     3481 aagctggcag tggaacccgt tggatgaccc agctcatgtt tctcctgcct gcccttggtc
     3541 ctgttggagg acaggatgca cctggccatt cccaggccca ggtcttggtg tggcaatgca
     3601 gccctgacgc g
//
