LOCUS       NM_080907               3782 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus protein phosphatase 4, regulatory subunit 1
            (Ppp4r1), mRNA.
ACCESSION   NM_080907
VERSION     NM_080907.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Wada,T., Miyata,T., Inagi,R., Nangaku,M., Wagatsuma,M., Suzuki,D.,
            Wadzinski,B.E., Okubo,K. and Kurokawa,K.
  TITLE     Cloning and characterization of a novel subunit of protein
            serine/threonine phosphatase 4 from mesangial cells
  JOURNAL   J Am Soc Nephrol 12 (12), 2601-2608 (2001)
   PUBMED   11729228
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC061726.1.
            
            On Dec 20, 2003 this sequence version replaced NM_080907.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061726.1, AF332004.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q37"
     gene            1..3782
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /note="protein phosphatase 4, regulatory subunit 1"
                     /db_xref="GeneID:140943"
                     /db_xref="RGD:619798"
     exon            1..95
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     CDS             89..2944
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 1"
                     /protein_id="NP_543183.1"
                     /db_xref="GeneID:140943"
                     /db_xref="RGD:619798"
                     /translation="MADLSLLQEDLPEDADGLGVDDYSSESDVIIIPSALDFVSQDEM
                     LTPLGRLDKYAASENVFNRQMVARSLLDTLREVCGEERDCIAVLERISRLADDSEPTV
                     RAELMEQVPHIALFCQENRPSIPYAFSKYLLPIVVRYLADQNNQVRKTSQAALLALLE
                     QELIERLDVETKVCPVLIDLTAPDSNDDVKTEAVAIMCKMAPMVGKDITERLILPRFC
                     EMCCDCRMFHVRKVCAANFGDICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECF
                     MAVSCATCQEIRRTKLSALFINLISDPSRWVRQAAFQSLGPFISTFANPSSSGQCFKD
                     ESKSSEDKDRIRDDGVVQEEQSRPEDAPSDLSAPHSSARLDGTLEGCAAETPGDSAGD
                     MRVPADSSLLCTLSSESPQEAASDAESGKKHDNNSKSASRPDVGTSSPEPTPLDQEMF
                     NSFHFWRTPLPQIDLDKELQQDPGERPSPERTGDAPAAPVPGSPSITMATRKELEEMI
                     ENLEPHMDDPDVKAQVEVLSAALRASTLDAHDEAGGAEQRSELQDDAVGAGGELPNCS
                     ISEDTSEPLVIAAEENMEATPDYIHGGADVGPGGGGGFSPDEERRPKVQDVVPQALLD
                     QYLSMTDPSRAQTVDTEIAKHCAYSLPGVALTLGRQNWHCLRETYETLASDMQWKVRR
                     TLAFSIHELAVILGDQLTAADLVPIFNGFLKDLDEVRIGVLKHLHDFLKLLHIDKRRE
                     YLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSV
                     RWISYKLVSEMVKKLHMATPPTFGVELINELVENFGRCPKWSGRQAFVFVCQTVIEDD
                     CLPMDQFAVHLMPHLLTLANDRVPNVRVLLAKTLRQTLLEKEYFLASASCHQEAVEQT
                     IMALQMDRDSDVKYFASIHPSSTKLSEDAMSTASSTY"
     exon            96..140
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            141..276
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            277..383
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            384..526
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            527..673
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            674..781
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            782..847
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            848..1006
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            1007..1119
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            1120..1652
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            1653..1831
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            1832..1933
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            1934..2119
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            2120..2281
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            2282..2382
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            2383..2503
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            2504..2638
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            2639..2780
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
     exon            2781..3765
                     /gene="Ppp4r1"
                     /gene_synonym="Pp4r1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccggcccg cgcgcgccca ccggctcccg gctcgcgcgg ctcgcggagc gggatcccgg
       61 gagacgagga ggcgggggcg agcacaagat ggcggacctc tcgctgctcc aggaggacct
      121 gccggaggac gcggacggac ttggtgtgga tgactacagc tcagagtctg atgtgattat
      181 tataccttca gccctggact tcgtctcaca agatgaaatg ttgacaccct tggggaggct
      241 ggacaagtat gctgcaagtg agaacgtctt taacagacaa atggtggccc ggagtttgct
      301 ggatactctg agggaagtct gtggtgagga gagagactgc attgctgtct tggaaaggat
      361 cagccgattg gctgatgact cagaaccaac cgtgagagcc gagctgatgg aacaggtgcc
      421 gcacatcgca ctgttttgtc aagagaaccg accttccata ccatatgcct tttccaagta
      481 cttactgcca atcgtggtta gataccttgc agaccagaat aaccaggtga ggaaaaccag
      541 ccaggcagct ttgctggctc tgctggagca ggagctgatt gagcgactcg atgtggagac
      601 caaggtgtgc cccgtcctca tagacttgac tgccccagac agcaatgacg atgtgaagac
      661 agaggccgtg gctataatgt gcaagatggc ccccatggtt gggaaagata ttacagagcg
      721 tctcatcctc cctaggtttt gtgagatgtg ctgtgactgt agaatgtttc acgtccgaaa
      781 ggtctgtgct gccaattttg gagacatttg cagcgtagtt ggccagcaag ctacagaaga
      841 aatgctgctg cccaggttct tccagctgtg ttctgacaat gtgtggggcg tccggaaggc
      901 ctgtgctgag tgcttcatgg ccgtctcctg cgcgacatgc caagaaatcc gacggacaaa
      961 gttgtcagca ctgtttatta acttgatcag tgatccttca cgttgggttc gccaagcagc
     1021 ctttcagtcc ctggggcctt tcatatccac atttgctaat ccatcaagct cgggccagtg
     1081 cttcaaagat gagagcaaaa gctcagaaga caaagacagg atcagagacg atggtgttgt
     1141 acaagaagag cagagcaggc cagaggacgc accttcagac ctcagtgccc ctcactccag
     1201 tgccaggctg gacggcacac ttgaaggctg tgctgccgag acgcctgggg actctgcagg
     1261 tgacatgcgt gttccagcgg acagctcctt actctgtact ttgtcctcag agtctcctca
     1321 ggaagcagct agtgacgctg agagtggtaa aaagcacgat aacaacagca agtctgcgtc
     1381 ccggccagac gttggcacca gctccccaga gcccactccc ttagatcagg aaatgttcaa
     1441 ctccttccat ttctggagga ctcctctacc ccagatagat cttgataaag agctccaaca
     1501 ggaccctggg gagaggccca gcccagagag aacaggagat gcacctgcag cccctgtacc
     1561 aggttctccc agtatcacca tggctacccg gaaggaacta gaagaaatga tagaaaacct
     1621 agagccgcac atggatgacc cggatgttaa agcccaggtg gaagtgctgt cggccgccct
     1681 gcgcgcttct accctggatg ctcacgacga ggctggcggt gcagagcagc ggagtgagct
     1741 gcaggacgac gcagtgggtg ccggcggcga gcttccaaac tgtagcatca gcgaagacac
     1801 ttctgagcct ctggtcatcg ctgctgagga gaatatggag gccactcctg actatatcca
     1861 tggaggtgcg gatgtaggcc ccggtggcgg tggtggcttc agcccggatg aagagaggag
     1921 acccaaagtc caggatgtcg taccacaagc gttactagac cagtacctgt caatgaccga
     1981 cccttctcga gcacagacag tcgacaccga gatcgctaag cactgtgcat acagtctgcc
     2041 gggtgtggct ctgacccttg gcagacagaa ctggcactgc ttgagagaga cttacgagac
     2101 cctagcgtca gacatgcagt ggaaagttcg aagaactctg gccttctcca tccatgagct
     2161 cgcggtgatt ctcggggacc agctgacagc agcagacctg gttccgattt ttaatgggtt
     2221 tttaaaagat cttgacgaag tcaggatagg tgttctcaaa cacttgcatg actttctgaa
     2281 gcttcttcat attgataaaa gaagagagta cctttatcaa ctccaggagt ttttggtgac
     2341 agacaacagt agaaattggc ggtttcgagc tgaactggca gaacagctga ttttacttct
     2401 agaattatat agtcccagag atgtttatga ttacttacgt cccattgctc tgaatctgtg
     2461 tgcagacaaa gtttcttcag tccgttggat ttcctacaag ttggtcagtg agatggtgaa
     2521 gaagctacac atggcgacgc cgccaacgtt cggagtcgag ctcatcaatg agctggtgga
     2581 gaacttcggc aggtgtccaa agtggtcggg ccggcaggcc ttcgtcttcg tgtgccagac
     2641 tgtcattgag gacgactgcc tccccatgga ccagtttgct gtgcacctga tgccacattt
     2701 gctgaccttg gcaaatgaca gggttcccaa cgttagagtg ctgcttgcaa aaacccttcg
     2761 acagactcta ctagagaaag aatacttctt agcctctgcc agctgtcatc aggaggccgt
     2821 ggagcagaca atcatggccc ttcagatgga tcgagacagt gacgtcaagt actttgcaag
     2881 catccacccg tccagtacca aactctctga agacgcaatg agtacagctt cctccaccta
     2941 ctgacccctg acccacggtg tccttcctgc atccgcgaga gcctggcctc agccgcctgc
     3001 gccactcggg acagctgtgg tggtggggcc tccctcctgc cagctcattc gcaggtgcaa
     3061 gttgcctact cccataccag tggttttaag agtcaagaga aagtacagta aacactatta
     3121 tcttatcttg acttagggaa agtaaactct cagaggatta taattgtcac caaagcctta
     3181 actcattact tcctcttcct gactgaatga cttgaattgg cagagcattt tcccttcggg
     3241 aaggaggagg ttcccagaga cctgcgctgc tttctcctgg ttttatttaa cgctggtaaa
     3301 tggcattctt accgccggaa ggtggacacg caccggacag ggaggcctgg gtattagccc
     3361 aagcacttgt cccaggtgcg agtctgctcg gctcctgggc tgccctgccc agccctaagt
     3421 gtgaatagtt cttggcgtgt ataaatgaca ggagtttttc ctctcctaag ggcttgatgt
     3481 taacactaag tagaatctga ttttgactcc taatgcagca cattgctgta cacatttaca
     3541 gaatgtttgc agactctctc ccgactcttt tcatgctggt catgacgtga aggggacttc
     3601 tcagcagata ttgtgtcagg tgttcttaac ttgatcatgg tcagctctga ggtgcgactt
     3661 tccttcccat gctgcacacc cctgtggcca cgctggggca tgcagcctta atcatgctgt
     3721 tagaactgtt gtggtacaaa ttccaaataa aatttattaa taggaaaaaa aaaaaaaaaa
     3781 aa
//
