LOCUS       XM_039092987            3134 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus protein phosphatase 3 catalytic
            subunit beta (Ppp3cb), transcript variant X3, mRNA.
ACCESSION   XM_039092987
VERSION     XM_039092987.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086033) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..3134
                     /gene="Ppp3cb"
                     /gene_synonym="Calna2"
                     /note="protein phosphatase 3 catalytic subunit beta;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 21 ESTs, 191 long SRA reads, 2
                     Proteins"
                     /db_xref="GeneID:24675"
                     /db_xref="RGD:3383"
     CDS             120..1718
                     /gene="Ppp3cb"
                     /gene_synonym="Calna2"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 2B
                     catalytic subunit beta isoform isoform X3"
                     /protein_id="XP_038948915.1"
                     /db_xref="GeneID:24675"
                     /db_xref="RGD:3383"
                     /translation="MAAPEPARAAPPPPPPPPPPLGADRVVKAVPFPPTHRLTSEEVF
                     DMDGIPRVDVLKNHLVKEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHG
                     QFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNH
                     ECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTL
                     DDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCE
                     FLQNNNLLSIIRAHEAQDAGMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN
                     VMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQF
                     DERLIYGNKKVGSAAARKEIIRNKIRAIGKMARVFSVLREESESVLTLKGLTPTGMLP
                     SGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFEEAKGLDRINERMPPRKDAVQ
                     QDGFNSLNTAHTTENHGTGNHSAQ"
     polyA_site      3134
                     /gene="Ppp3cb"
                     /gene_synonym="Calna2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctctgaaggg aaagagggtc cgccatgttc cccggcggcg ccgccgctcg gctctggtag
       61 ccgccgcccc cgcccccaac cccgcccggc ccggcaccta gccgagcccc gggcccagca
      121 tggccgcccc ggagccggcc cgggccgcgc cgccccctcc cccgcccccg ccgccccccc
      181 tcggggccga ccgcgtcgtc aaagccgttc cttttccccc aactcaccgg ttgacatctg
      241 aagaagtgtt tgatatggat gggataccca gggttgatgt tctgaagaac catctggtaa
      301 aagaaggtcg ggtagatgaa gaaattgcac taagaattat caatgagggt gctgccatac
      361 ttaggcggga gaaaaccatg atagaagtag aagctccaat tacagtgtgt ggtgacatcc
      421 atggccaatt ttttgatctg atgaaacttt ttgaagtagg aggatcacct gctaatacac
      481 gatacctttt tcttggtgat tatgtggaca gaggttattt tagtatagag tgtgtcttgt
      541 atttatgggt cttgaagatt ctatacccaa gcacattatt ccttctgaga ggcaaccatg
      601 aatgcagaca cctcactgag tattttacct ttaagcagga atgtaaaatt aagtattcag
      661 aaagggtcta tgaagcttgt atggaggctt ttgacagctt gccccttgct gcacttctaa
      721 accaacaatt tctttgtgtt catggtggac tttcaccaga gatacacaca ctggatgata
      781 ttaggagatt agatagattt aaagagccac ctgcatttgg accaatgtgt gacttgctgt
      841 ggtctgatcc ttctgaagac tttggaaatg aaaaatcaca agaacatttt agtcataata
      901 cggttcgagg atgttcttat ttttataact atccagcagt gtgtgaattt ttgcaaaaca
      961 ataatttgtt atcgattatt agagctcatg aagctcaaga tgcaggaatg tacagaaaaa
     1021 gtcaaactac agggtttcct tcattaataa caattttttc ggcacctaat tacttagatg
     1081 tctacaataa taaagctgct gtactaaagt atgagaacaa tgtgatgaac atccgccagt
     1141 ttaactgttc tccacatcct tactggttgc ccaattttat ggatgtcttt acatggtctt
     1201 taccatttgt tggagaaaaa gtcacagaga tgttggtaaa tgttctcagt atttgctctg
     1261 atgatgaact aatgacagaa ggggaagacc agtttgatga acggctcata tatggcaata
     1321 aaaaagtagg ttcagctgca gcccggaaag aaatcataag aaacaagatc cgagcaattg
     1381 gcaagatggc aagagtcttc tctgttctca gggaggagag tgaaagcgtg ctgacactca
     1441 agggcctgac tcccacaggg atgttgccta gtggagtgtt ggctggagga cggcagacct
     1501 tgcaaagtgc cacagttgag gctattgagg ctgaaaaagc aatacgagga ttctctccac
     1561 cacatagaat ctgcagtttt gaagaggcaa agggtttgga taggatcaat gagagaatgc
     1621 caccccggaa agatgctgtg cagcaagatg gtttcaattc cctgaacacc gcacatacca
     1681 ctgagaacca cgggactggc aaccatagtg cccagtgacc agcggcttcc cagggatgga
     1741 cagatcacta aggagccgga ggggtcggcc gagctgatga taaatgtcat aatctctctg
     1801 aagaaacaaa ccattgtgct ttttgagacc cttgccccct tcccggatgg aggcttgagg
     1861 gccttgggac ttgtgctgtc cataagattg gggaatcgct gccacagcgg agagcagtga
     1921 gcaaggggct tggggcaaat tccagtggag gaagcccaaa cctccattta tgcttgtggt
     1981 tcacacattt acgtttacaa atgagatttc ctttgttttc tccctcagta gaattagatt
     2041 tttttcaacc atgactttaa atgcaatctt tagagttaat gtggaacctc cctcaccccc
     2101 accccatgaa atgtctttaa gaggatggat tagcatggtc ttaaaatata tttctgaggt
     2161 tactagatgt attttgaatt gtagacaaaa tctgagaaac ccagttggtg tttatataaa
     2221 aacgctgacc tcaggtcata gttcttaaat gtggctaatt ctgtaacata gtcttggtat
     2281 ttttcaatta tgaatgcata aactatttct aagaagactc ttacttgaac aagatccaaa
     2341 aaaccaattt agattctttt ttgcccatat cttttgagat tttcacccca gagatttaag
     2401 gaaaaaaaaa aactaaattt taaaattatg aagaattaca gaattactca tttaaggtac
     2461 tttaaaagaa gtttgtacat tgtcaaagta aattttaatt caaatcattg tctgtaaaac
     2521 ttgacgtatt ttgtgtatgc atgttttcat tttgcaaata tttaatatat agacctatga
     2581 tgtacaggta caacatgtat aggttgcgtg gatattatga gaaattttag tttcttgtga
     2641 gtactccagt tgcttaaaaa ccaccagggg gatttgctgc tggttctaac atttttatgt
     2701 ttaaatgcaa aggaaattta aagtgtctgg acatgtttct gactaatgca gcctagaagc
     2761 aatggttctc ttcagccctt cagatgttag tggaagcata aaagtcaaga ctgcatgtcg
     2821 aaattttact tttgatagtt acagaactgc ttggttaaat taaatggagc catgtgctaa
     2881 ttttacagtt actgaccttg tactgattgc cactgtagtt tggtgatccc tttactttgg
     2941 tggcttgctt cccttatgcc ctggactaca gctcatagca tcaggcagcg gagccatctg
     3001 ctgttttgtt tgccaggaag tgcaccttgt atggtcttct gtctaagttg gaaatattat
     3061 gcatgtgcag gactattcaa gtattttata aacagtagca cacaataaat tccatgcatg
     3121 ggccgctgct ccta
//
