LOCUS       XM_006244570            3586 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus protein phosphatase 2, regulatory
            subunit B', delta (Ppp2r5d), transcript variant X1, mRNA.
ACCESSION   XM_006244570
VERSION     XM_006244570.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006244570.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006244570.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3586
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3586
                     /gene="Ppp2r5d"
                     /note="protein phosphatase 2, regulatory subunit B',
                     delta; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 52 ESTs, 3 long SRA reads, 32
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 47 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:363193"
                     /db_xref="RGD:1306666"
     CDS             576..2594
                     /gene="Ppp2r5d"
                     /codon_start=1
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit delta isoform isoform X1"
                     /protein_id="XP_006244632.1"
                     /db_xref="GeneID:363193"
                     /db_xref="RGD:1306666"
                     /translation="MRKKGSCLAPMTNPRRRRLVVRQVCKSSGQLEAQPPLGPGAARR
                     RWRRDAERAECGRAEPEPERGRRSRAGCGPAEMPYKLKKDKQEPPKLAKGTAKPSSSS
                     KDGGGENTDTEAQPQPQPQPPSSNKRPSNSTPPPTQLSKIKYSGGPQIVKKERRQSSS
                     RFNLSKNRELQKLPALKDSPTQEREELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAG
                     LNEMVEYITHSRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAA
                     WPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERDFLKTILHR
                     IYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKMF
                     LIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPKEVMF
                     LNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDN
                     AARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQKGR
                     FRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPTAEDIQLLKRTVETE
                     AVQMLKDIKKDKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQEAL"
ORIGIN      
        1 gggcggggtg tcggaagccg agtcgggtcg ctaagaagac gtactgtgcg ggggctggtt
       61 cgatggccac ctccgttgtc gtcgacgcac gcgccctttg actctgagtg taggagcttt
      121 tacctttaca attcgtccgg ttccaccgct gataggcttc cccctctgct cctctacaac
      181 ggtgatctag gacagacttg atgaatgccc gggaggaccc ttgggagtct tctctatcaa
      241 tttcacatgt tcaatttgag ctactttaaa ttcctgtgaa gaaaggtgcc ctttcgtgtt
      301 agggcctctt tcctccagtc cgaacggagc agggcaggta gaagagtagg ggaaaacgtg
      361 agagccactt ctggagggaa ggagcagagc tcaaaggact gaagaatagc agaggacgac
      421 gcataaggcg acgccggagt gcagctctgc cagcccagct ccggtttccc catggccccg
      481 ccccctccac gaagcccgac cctttctagg gcgggacctt ccactccagc caattctagg
      541 agccgaaccc tggcggtttg tactcgttct ttccaatgag aaaaaaggga agctgcttgg
      601 ctccaatgac caatccgagg aggcggcgcc tggttgtcag gcaggtttgt aagagttcgg
      661 gccaattgga agcgcagcca ccgctcggcc cgggcgcagc gcgcaggcgg tggcgaagag
      721 acgccgagcg ggccgagtgc ggccgagcag agccggagcc ggagcggggc cgcaggagcc
      781 gggccgggtg tggaccggcc gagatgccct ataaactgaa gaaggataag caggagcccc
      841 ccaagcttgc caaaggcaca gccaagccca gcagctccag caaggatggt ggaggggaga
      901 acacagacac agaggcgcag ccccagcccc agcctcagcc accatcatcc aacaagcgac
      961 ctagtaacag cacaccaccc ccaacgcaac tcagcaaaat caagtactca gggggacccc
     1021 agattgtcaa gaaagaacga cgccaaagct cctcccgctt caacctcagc aagaaccggg
     1081 agctacagaa acttcctgcc ttgaaagatt cgccaaccca ggaacgtgag gagctgttca
     1141 tccagaagct acgccagtgc tgtgtcctct ttgacttcgt gtcagaccca ctcagtgacc
     1201 tcaaattcaa agaggtgaag cgggcaggac tcaatgagat ggtggagtat atcacccaca
     1261 gccgtgacgt tgtcaccgag gccatctacc ccgaggctgt caccatgttt tcagtgaatc
     1321 tcttccggac gctgcctcct tcatcgaatc ccacaggagc cgagtttgac cctgaggaag
     1381 atgagcctac cttggaagcg gcctggccac atctccagct tgtgtatgag tttttcttac
     1441 gtttcttgga atctccagat ttccagccga atatagccaa gaagtacatt gaccagaagt
     1501 ttgtacttgc tctcctggac cttttcgata gcgaagaccc tcgagagcgg gattttctta
     1561 agaccatttt gcatcgcatc tatggcaagt ttttggggct ccgggcttat atccgtaggc
     1621 agatcaacca catcttctac aggttcattt atgagactga gcatcacaat ggcattgctg
     1681 agctcctgga gatcctcggc agcatcatca atggctttgc cttgcccctt aaggaagagc
     1741 acaagatgtt tctcatccgc gtcctgcttc cacttcacaa agtcaagtcc ctgagtgtgt
     1801 accaccctca gctggcatac tgtgtggtac agttcctgga gaaagagagc agtctcactg
     1861 agccggtgat tgtgggactt ctcaaatttt ggcctaagac ccacagcccc aaggaggtga
     1921 tgtttctgaa tgagctagag gagattctgg atgtcattga accctcggag ttcagcaaag
     1981 tcatggagcc gctcttccgc cagctcgcca aatgtgtctc cagcccccat ttccaggtgg
     2041 cagagcgtgc cctgtactac tggaacaatg agtacatcat gagcctgatc agtgacaatg
     2101 ctgcccgtgt cctccccatc atgtttcctg cgctctacag gaactccaaa agccactgga
     2161 acaagacaat ccatggactc atctacaatg ccctgaagct cttcatggag atgaaccaga
     2221 agctgtttga tgattgtaca caacagtaca aggccgagaa gcagaagggc cggttccgaa
     2281 tgaaggagag agaggagatg tggcagaaga ttgaggagct ggcccggctc aatccccagt
     2341 accctatgtt tcgagctcct ccaccgctgc cccctgtgta ttccatggag acagagaccc
     2401 ccacagcaga ggacatccag ctcctgaaaa ggacggtgga aacagaagca gtgcagatgc
     2461 tgaaggacat caagaaggat aaagtgctgc tccggaggaa gtcagagctg ccacaggatg
     2521 tgtacaccat caaggcactg gaggcacaca agcgggcaga agagtttcta actgccagcc
     2581 aggaggctct ctgacccctt caccttccca cagggttatc gcccactcag ccctggggtg
     2641 cagcccagcc cttcaccctc tgctccttat tggctgacct ggggcaaaac agcacctctc
     2701 tggctactct aggatgcagg cactggaagc agggatgccc ggcgtgctcc ctcttctccc
     2761 ctaactgtgt tcatgcctcc ctgtggctag tacagacagg ctgagcactg agtgctcagt
     2821 gcttagacaa cctgggggtg cctgtccccc tgctcctaac cccacagcta cctgaaactg
     2881 ttctgagaaa tacacacagg aatcacatgt tcctctcctc tccccttcat cctcatctga
     2941 agttgaggtg tctctcctct tcctgcaggg tacagcagga gagtgccacc aaagtcatgt
     3001 taagctccgc aggcccctgg cgtgaagagc tggggggacc catcctgagc agcacaagta
     3061 ggccccaggc ctagctttat gcaggcaggg ggagtgtggt cctttttatc ctatgcctaa
     3121 acaagacaac acagacggac aaactagtat gttatggaca ctagatgact acagggcccg
     3181 gtgtgccaag cagggagaat gagccatctg ccttgccctc tctggcaagc agtagtcctg
     3241 ggatcacagt tgaagggacc accctgtggc tgactgcttt ccctgctctt ggttcccaga
     3301 gctatagagg agcagcagga gcagtgctct aagcatggct ccctggagtg cctatttatt
     3361 tccttgtttt tgctgatgct gggcaggtcc tcacctgtac cctttgggca ctcagaaaca
     3421 caatagactg gggagggctg gaccaggatt caggggcaca ggcagcacgg cgtttggctg
     3481 tgtacatagg gtgctttatt ctccacagag tgatacaggc taaggtgggc tgggcttggg
     3541 ccaatgtccc catatgtaca gaactgaata aagtgggtct ctgaga
//
