LOCUS       XM_039106149            5801 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus protein phosphatase 1, regulatory
            subunit 26 (Ppp1r26), transcript variant X3, mRNA.
ACCESSION   XM_039106149
VERSION     XM_039106149.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106149.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5801
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5801
                     /gene="Ppp1r26"
                     /note="protein phosphatase 1, regulatory subunit 26;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 24 ESTs, 3 long SRA reads, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 57 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:685398"
                     /db_xref="RGD:1595050"
     CDS             767..4264
                     /gene="Ppp1r26"
                     /codon_start=1
                     /product="protein phosphatase 1 regulatory subunit 26"
                     /protein_id="XP_038962077.1"
                     /db_xref="GeneID:685398"
                     /db_xref="RGD:1595050"
                     /translation="MFLMNAPPVVALQSRWEAFGQPRSFCFPDCFSESKEDTSRASVS
                     ARVQMLISTLQRDEAALGMNHERVTQRGQRAERSRDTRLAPKPAVCKEQPEFPACGLV
                     ANRSTLEKDEAGRHGPLELDSDSDDSVDRDIEEAIQEYLKAKGGASGPVSQGVPSIPE
                     PAHSSALPIPCPSQLTPGSGSVPVGASEDQGSTSPASMSSEDSFEQSIRAEIEQFLHE
                     KRQHEHPKCDGSVDKKSGPNENPARLRGNRETSARAALIGTCKEFIFRKPPRLTKVST
                     QPRNSQPKLTTEPETPVSTKLAAHRPEAAQSRGGMRRGVPARRSKRIRSSAPVHQTSD
                     SSSDDGIEEAIQLYQLEKTRKEASGDQPLRAQPKEESPGSTQPSALPEAHRRPPSKKK
                     VAVPKVIDTTQGGLHPDPLSKLLTDSRTSVSPGHTAAKSDAVLHQASCLADTSTELMC
                     AEAILDISKTILPAPMEGHDRPPSRNLLFCPQPMPPRSEGDSSNVDSDDSIEQEIRTF
                     LALKAQVGSPQPAQGPLPSPGPSGQPGVPKAKTPDLPLGFKRKRRGGGSTTVPKKIRE
                     GRESAQDGDHIQGKVQHGHDGWDPLGQSKITETPGGEAEAKDPPVSSRIVGLSDTHLS
                     QGHGALGKASEKESSEDKSSSLDSDEDLDMAIKDLLRSKRKFRKRGRDPRASCKKVRF
                     GSTETRCGEKLSSLPGDWKDHRQQALRSCLHKCRGDNKDGPGRSPGSTCSSVTERGKL
                     GGIGVEDAIPTFLPRRKSPEGAPPSKDTGASGHPPSASSPTSEDSAVDSDDSIELEIR
                     RFLAEKAKESVRNAEPQGVPAKPEMACRKEPTLGLQPGVCTRSQKARGTPQLAEGRRG
                     PERARTQATSLLSQTGRGALRAEQATHLTSALGRSEPALPKNTSKNSSAKASLPSRKS
                     ANVHKDHSPQGIQTAMAESVFGQLPSCATVGTEAGSTKGTFHLNCGSQNLLTPNPGSQ
                     ADLSLPWSDFAQQSRLSSPWMLNSGQGTVWTGVFRGEKEKGTTPQAGDPPSLSSGPRK
                     GLPFLSTQLFHFGKNVSWGGKQAGFFSPNLGLPLQGPAFSAFRETQPGHNPVFGSPRL
                     LMKDSGNWPSRKAQGTLRQQDRRNSGSEDKVLDLRYRHRVDREQQDQETLGSDASEFS
                     DTSVEDGGSATVSSKGLKL"
ORIGIN      
        1 ggcgggagag accgcccggg gggagggggt cgccccgccc ctcgccgcgc cggccccgcc
       61 ctcctctccc gcgctcccac ggcgcgccgg gcccctgagt cccggaggga ctccggggtg
      121 gccgcgggcg ccggaccgag ggagggcggg gcgctagtgg ccgcgcttcc ccgctctccg
      181 ggcctggcgc ctcccgggac gcggggcgcc gggcgggcag ctggtccggc ttcgcggtgc
      241 aggccgcggc gtgcgaggtc gggatcgggt tggtggctgg ggcaggtcgc tgtcacggga
      301 gagggtcatg gcccccggga ggcgcctccg gcgcgtgcct ggcgcttgtt gcgccctgcg
      361 ttcctcgaga gccagcgggc gcaggtccgg cccagttcat ggttctccag aatgacagct
      421 cccaagattg accaggtagt tgaaccaaca accattgaga ctgtcagaga agcccagctc
      481 tgggtccatc gtataagctg tgagcagaca atttggtctc actagagagc cctggctagc
      541 caggaactca ctatgtacag accaggctgt cctggtgctt ggattgaaag tgtgcatcac
      601 cgtgcccagc cctcgcagcc cattttaaaa gctggtggaa gatgccctga agtacagagc
      661 gaaagagtga agatctcatc cccgaagccg tgctcctgag actttcaaga tgtgaaacag
      721 gctgccggat aagcccagcc tctcagtccc cagcctgcct gctaggatgt tcctcatgaa
      781 cgcccctcca gtggtggcgc tccaatccag atgggaggcc tttggccagc ccaggagctt
      841 ctgctttcca gactgcttct ccgagtctaa agaggacacc tccagggctt cagtgagtgc
      901 aagggtacag atgcttatca gcaccctgca gagagacgag gctgccctgg gcatgaacca
      961 tgagcgtgtc acacagagag gccaacgtgc agagaggtcc cgggacacca ggctggcccc
     1021 caagcctgct gtgtgcaaag aacagccaga gttccctgcg tgtggtcttg ttgcaaaccg
     1081 cagcaccctg gagaaagatg aagctgggag acatggtccc ttagagctgg attctgacag
     1141 tgatgactcg gtggaccggg acattgagga ggctatccaa gagtacctga aggcaaaggg
     1201 tggggcttct ggacctgtgt cccagggggt cccctctatc ccagagcctg cccacagcag
     1261 tgccctgccc atcccgtgtc cctcacagct cactcctggc tcaggcagtg ttcctgtggg
     1321 agccagtgaa gaccagggct ccacctcccc agctagcatg agcagcgagg actcctttga
     1381 acagagcatc cgagctgaaa tagaacagtt tcttcatgag aaaagacagc acgaacaccc
     1441 gaagtgtgat gggtctgtgg ataagaaatc aggcccaaac gagaaccctg cgagacttag
     1501 aggaaaccga gaaacctcag ccagggcagc tctgatagga acctgtaagg agttcatctt
     1561 ccgaaaacct cccaggttaa caaaggtgag cacacagccg agaaactcac agcctaagct
     1621 caccacggag cctgagaccc cagtgagcac aaagctggcc gcccacagac cagaggctgc
     1681 ccagagcagg ggtggaatga ggagaggtgt gcctgccagg cgtagcaagc gtatcaggag
     1741 ctcagcccct gtgcaccaga catcggactc cagcagtgac gacggcattg aggaagccat
     1801 tcagctgtac cagctagaga aaaccaggaa ggaggccagt ggggaccaac ctctgagagc
     1861 ccagccgaaa gaggaaagcc ctggtagtac ccagccaagt gccttgcctg aagcccacag
     1921 gagaccccct agcaagaaaa aggtggcagt tccaaaggtt atagacacca cccagggggg
     1981 cctccaccct gaccccctct ctaagctcct aacagattcg agaacctctg tatctccagg
     2041 acacacagct gccaaaagtg acgctgtgct gcaccaggcc tcatgcctag cagacacatc
     2101 cactgagctg atgtgcgcag aagcaatcct ggacatctcc aagaccatcc tgccagcccc
     2161 catggaagga catgacaggc caccatccag gaacctactc ttctgtcccc aacctatgcc
     2221 tccccgctct gaaggtgaca gcagcaacgt tgacagtgac gacagcatcg agcaggagat
     2281 ccggaccttt ttggccctca aggcacaagt agggagtcct cagcctgccc agggtccact
     2341 gccctcacct ggccccagcg gccagcctgg cgtccccaag gctaaaacac cagatctccc
     2401 tctgggcttc aaacggaaac ggagaggtgg gggcagcacc acagtgccca agaaaataag
     2461 ggagggtaga gaaagcgccc aggatggtga ccacatccag gggaaggtcc agcatggcca
     2521 tgatgggtgg gaccctctcg ggcagagcaa aatcacagag accccaggag gagaggctga
     2581 agccaaggac ccgcctgtct cttccaggat agttgggctc agtgacacac acctatcaca
     2641 aggccatgga gcccttggga aggccagtga gaaagaaagc tctgaggata agagcagttc
     2701 tctggacagt gacgaggacc tggacatggc catcaaggac ttgttaagat ccaagcggaa
     2761 gtttaggaag aggggccgag acccacgggc ttcgtgtaag aaggtcagat ttggcagcac
     2821 agagactcgg tgtggggaga aactgagcag ccttccaggg gactggaaag accacagaca
     2881 gcaggcacta cggagctgtc tgcacaagtg cagaggggac aacaaagatg gcccagggag
     2941 aagcccagga agcacctgca gcagcgtgac agagaggggg aagctgggtg gcataggggt
     3001 tgaagatgcc atccccacct ttctccccag gaggaaaagt ccagaagggg ctcctccctc
     3061 caaggacaca ggagccagtg gccaccctcc ttcagcctcc agccccacat ctgaggacag
     3121 cgcagtggac agtgatgaca gcattgagct ggagatcagg aggtttttgg cagaaaaggc
     3181 caaggagtct gtacgcaacg cggaacctca aggagtccct gccaagccgg agatggcctg
     3241 taggaaagag ccaacgctgg ggttgcagcc tggagtgtgc acacggagcc aaaaagccag
     3301 gggaacccct cagctggcag aaggaaggag aggcccagag agagctcgga cacaggcaac
     3361 cagcctcttg agccagactg ggaggggtgc cctccgtgcg gagcaggcca cccacctcac
     3421 ctctgccctg ggccgaagcg agccagcact acccaagaac accagcaaga acagctctgc
     3481 caaagcctct ctacccagca ggaaaagtgc taacgttcac aaagaccaca gcccacaggg
     3541 gatccagact gcaatggcag aaagtgtgtt cggtcagctg cccagctgtg ccacagtggg
     3601 taccgaggct ggaagcacca aggggacctt tcacctgaac tgtggcagtc agaacttgct
     3661 aacccccaac cccgggtccc aggctgacct ctccctccct tggagtgatt ttgcacagca
     3721 gagcaggctc tccagcccat ggatgctgaa ctcgggtcaa ggcacagtgt ggacaggggt
     3781 ctttcggggt gagaaagaaa aggggaccac accacaggct ggggacccac ccagcctctc
     3841 ctcaggcccc aggaagggcc tgcctttcct ttccacgcag ctcttccact ttgggaagaa
     3901 tgtttcctgg ggaggcaagc aggctggctt cttcagcccc aatctgggcc tacctctgca
     3961 gggtccagct ttctcagcct tcagggagac ccagcctggc cacaaccctg tatttggaag
     4021 cccacgcttg ctaatgaagg acagtgggaa ctggccaagc cggaaggctc aggggaccct
     4081 gagacagcag gacaggagga attctggctc tgaggacaaa gtcctagacc tgagatatcg
     4141 gcacagggtt gacagggagc agcaggacca ggagaccttg ggcagtgatg ccagcgaatt
     4201 cagtgacacc tccgtggagg atgggggcag tgccacagtg agcagtaaag gcctcaagtt
     4261 gtgacagaca tggctcttgc catagccatg ggaagcagtg cttgtgtctt atatgatgtg
     4321 cgtgtgtgtt tgcctgtctg tgtgcgtgtg cctgtgtgta tgtctgccta tgtatgcctg
     4381 tgtgtgtgtg tgaggcagca tagagtagaa gtagggggtc ctgacagtta aagagcaaaa
     4441 cttgggtccc ttccatgcag caccccctgc ccctgtataa atatgtacac taacttcaaa
     4501 tgacattttt atttaatgaa tgtgtcctgg tacataatag gttttgtagg gatttttgta
     4561 aattatttta aaagtgctgt acaaaatact ttttgagaac gttgttcagt cttgcagggt
     4621 gttcctagct gcaacgcctc tgtgctctcc gtgcatgtat ggtagatgag taaacacttg
     4681 gttccaagtg tccctgtgag ggtcagagac agaggctgga accggtcacc atttctaggg
     4741 caagtattca ggctggagat agcagctatc caccttggac gtgccaatgt ggttgaggtg
     4801 tgtcgggata ccactgggcc agacgctgtc tctggatgct gtagtcatgg cctgtaattg
     4861 gatagcattt caaagcacag cagccagcaa atagctaacc aaccacccct gtgtagggtg
     4921 ggaatccggc tactggctct gtagttcagc tgagcccaga tcatccagta tccggttgct
     4981 ggggggtcct taacatccat ataaacccct tcatgtgtga gctacagatt cgcttttaat
     5041 cgtggctcta aaaggagatc ccacattcct tttgactgtc cttatcttga tctgtatggg
     5101 agagtattga ggccatgaga tgacttggtc cccaaacacc ttagccacct gtgatggtga
     5161 gccccagccc tggaaacacc agcggtctgc atggctttct gcaaccctgc tcctacccag
     5221 ggaagaaggg cttggccagt gctaaggcca ggctgcaggc atcggagtct tgggagtcag
     5281 gcagagtgat acaccttggc gctgaggatg tgctggaccc cagatgtgag gattacatct
     5341 gcgctgtgac tacacctgtc tcccctgagt tctgcagctc agtatactgg attgctgtgt
     5401 gtctaccttg tggctgaatt ctgttggtat tctaccatgg aagtgagttt tctactttat
     5461 gtacctgggt ctgaattgta gatcacttct gtgcccaaat gctggcacat acccccacca
     5521 ttctctgtgt ctgccatgtt ggagctttga cgtggtgtag agctctaggg tcccattttg
     5581 gtcctaaatg atctggatct gtgtataata acatctatta tgcatacttg ttcatgtgtt
     5641 tctggaagaa acgtctttgt gtgtcatccg tgttcccacc ttaaattttt agagtgcttt
     5701 taagccttga aaacaaaaaa acatcttatt ttgtatataa ggcccgtcca gttttgtttt
     5761 ttgtttttct aatgaataaa cgaagtacta tccacaaatt a
//
