LOCUS       NM_001126287            2660 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus protein phosphatase 1, regulatory subunit 18
            (Ppp1r18), mRNA.
ACCESSION   NM_001126287 XM_001072744 XM_342085
VERSION     NM_001126287.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Hurt P, Walter L, Sudbrak R, Klages S, Muller I, Shiina T, Inoko H,
            Lehrach H, Gunther E, Reinhardt R and Himmelbauer H.
  TITLE     The genomic sequence and comparative analysis of the rat major
            histocompatibility complex
  JOURNAL   Genome Res 14 (4), 631-639 (2004)
   PUBMED   15060004
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC161960.1.
            
            On Oct 16, 2009 this sequence version replaced NM_001126287.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161960.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN06680413,
                                           SAMN06680416 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2660              BC161960.1         1-2660
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..2660
                     /gene="Ppp1r18"
                     /gene_synonym="Kiaa1949; RGD1309543"
                     /note="protein phosphatase 1, regulatory subunit 18"
                     /db_xref="GeneID:361790"
                     /db_xref="RGD:1309543"
     exon            1..45
                     /gene="Ppp1r18"
                     /gene_synonym="Kiaa1949; RGD1309543"
                     /inference="alignment:Splign:2.1.0"
     exon            46..1616
                     /gene="Ppp1r18"
                     /gene_synonym="Kiaa1949; RGD1309543"
                     /inference="alignment:Splign:2.1.0"
     CDS             51..1844
                     /gene="Ppp1r18"
                     /gene_synonym="Kiaa1949; RGD1309543"
                     /codon_start=1
                     /product="phostensin"
                     /protein_id="NP_001119759.2"
                     /db_xref="GeneID:361790"
                     /db_xref="RGD:1309543"
                     /translation="MTAIPDWKLQLLARRRQEEAAVRGREKAERDRLSQMPAWKRGIL
                     ERRRAKLGLPPGEGSPVPGNAEAGPPDPDESSVLLEAIGPVHQNRFIQQERQRQQQQQ
                     QQRNEVLGDRKAGPLEALERRSSPGNLRDQSPKGRESREERLSPREARDRKLVIGGTQ
                     ESSSRSLETGDWRQSPAEARDLDSRPAEAQKWRLSPGETPEENLRLAGSGDHSPKRKE
                     VLESRLSPGESGDQKTSLTEAHKWNLDSREAQKQSLVQLEATEWRLKSSEERKDYLEE
                     CGSEEEKLGSGIAPDQPSVTKEVQDTTSREVETAEQRPTEGWKWTLNSGKARERTPWD
                     IETQIHKADPPASSEKHPGPSAVEAGGEAEKEEAGAQSRPLRAQQNRCSGPSPLPPEH
                     SGTEGSRQQEEEAAEPRPPAPAPLSPPPSAPTAPQPSGDPLMSRLFYGVKPGPGVGAP
                     RRSGHTFTVNPRRCVPPASPAPPVNPATADAAGSGSGKKRYPTAEEILVLGGYLRLSR
                     SCLVKGSPERHHKQLKISFSETALETTYQYPSESSVLEDLGPEPEAPTAPLATQPDDD
                     EEEEEEELLLQPGLQGGLCTKALIVDESCRR"
     exon            1617..1824
                     /gene="Ppp1r18"
                     /gene_synonym="Kiaa1949; RGD1309543"
                     /inference="alignment:Splign:2.1.0"
     exon            1825..2632
                     /gene="Ppp1r18"
                     /gene_synonym="Kiaa1949; RGD1309543"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgacgcccga ctccactgca cctcctccta gggaccccaa ggcgtcgacc atgaccgcta
       61 tcccagattg gaagctacag ttgctagccc ggcggaggca ggaggaggca gcggttcgtg
      121 gccgtgagaa agcagaacgg gatcgcttat cccagatgcc agcctggaag cggggaattc
      181 tggaacgacg cagagccaag ttgggcctac ctcctggaga ggggagccct gtgcctggga
      241 atgcagaggc tggacctcca gacccggatg aatcttctgt ccttttggag gctattgggc
      301 cagtacatca gaaccgattc atccaacagg agcgacagcg gcagcagcag cagcagcagc
      361 agcgaaacga ggtgcttggt gataggaagg ctgggcctct ggaggctcta gaacggagat
      421 caagtcctgg taatttaaga gatcagagcc ctaagggaag agagtcaaga gaagagaggc
      481 taagtcccag ggaggccaga gataggaagc tggtgatagg aggaacccaa gagtcaagtt
      541 cgaggtcttt ggagactgga gactggaggc agagcccagc agaggccaga gacctggatt
      601 ccagaccagc tgaggctcag aaatggaggc tgagccctgg agaaactcca gaggagaatc
      661 tgagattagc aggttctgga gatcacagtc ccaagagaaa agaggtattg gaaagcagac
      721 tgagccctgg ggagtctggc gaccagaaga ccagtctgac agaggcccat aaatggaatc
      781 ttgactcaag agaagcccag aaacagagct tggtacagct ggaggccacg gagtggaggc
      841 tgaagtcaag tgaagagaga aaagactact tggaggagtg tgggagtgag gaagagaaat
      901 tgggttcagg gattgcccca gaccagcctt cagtgacaaa ggaggttcaa gacaccacct
      961 ctagagaagt ggagactgcc gagcagaggc ccactgaagg ctggaaatgg accctaaact
     1021 ctgggaaagc tcgagaacgg acaccttggg acatagagac gcaaattcat aaggcagatc
     1081 ctccagcatc ttcagagaag cacccgggac cttctgctgt ggaggctgga ggggaggctg
     1141 agaaggagga ggcgggggct cagagcaggc ctctgagagc ccagcagaac cgctgctctg
     1201 ggccctcccc cctcccacca gagcactctg ggacggaagg ctccagacag caggaagagg
     1261 aagcggcaga accccggccc ccagcaccag cccctctgtc tcccccaccc tcggccccaa
     1321 ctgcccccca accctctggg gatcccctca tgagccgtct gttctatggg gtgaaaccag
     1381 gaccgggggt gggggccccc cgacgcagtg gacacacctt cactgtcaac ccacggaggt
     1441 gtgtgccccc tgccagccca gcccctccag tcaaccctgc cacagctgat gctgcagggt
     1501 ctggatctgg caagaagcgg tacccaactg cagaggagat cttggtgctg gggggctacc
     1561 tccgtctcag ccgcagctgc cttgtcaagg gatcccctga aagacatcac aaacagctca
     1621 agatctcctt tagtgagaca gcactggaga ccacatacca atacccttcc gagagctcgg
     1681 tactggagga tctaggcccg gagcctgagg cccccactgc ccccttagca acgcagcctg
     1741 acgatgacga ggaggaggaa gaggaggagt tgcttctgca gcccgggctc cagggcgggc
     1801 tgtgcaccaa ggccctaatc gtggatgagt cctgccggcg gtgaccatct tcgagtttgg
     1861 gcatatacct ctctccttct cgcacctgaa gattctggag cttggatgat tcagagccga
     1921 cagacatggc agtgagcccg cctggcaggg aagggcgaca agcgagcgaa ttcggacttg
     1981 cttttcccat cctgttcctg gggcggagcc ggtagcctaa attgacccct aacccaaagt
     2041 tcccggtggg cggagcatcc tcggtgagct aagagtgagc atcaagtcct gggttggaat
     2101 tcagaattta tctggaattg agatggagca cctccagcct cacagccttc cttaaagctc
     2161 agccactctc cggggatccc gctccatcca cgaacacccc cttttctagg tcactacccc
     2221 tttgtttaca gcttccctct tgatcacagc ctggtttaca tacccactag ctcccaatcc
     2281 cacctgcaga gtcccaggtt tacaagccat gcctacccgc ggagcccctg tgggatcctc
     2341 caccttccct ttgtttcatt gtgagtgact tgggaaggtg tgtaaccttc ttcagctttg
     2401 ctcagtatta ctgtgcctcg gtttccccca agagggcagg ctggggatcc taatcctgaa
     2461 ccccatgaaa attatttaat tctgttcctc cacgtggttc acattgaatt gaattgcagt
     2521 gtggggggcg ctcaggaggc gcctcgcttc tccccattgc tccttggtca gctgcctggt
     2581 ttgtttcgtt ttttgtaact ttccgtaata aaatggagct cttttcaact ctaaaaaaaa
     2641 aaaaaaaaaa aaaaaaaaaa
//
