LOCUS       NM_001191946            3004 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus protein phosphatase 1, regulatory subunit 12C
            (Ppp1r12c), mRNA.
ACCESSION   NM_001191946 XM_574359
VERSION     NM_001191946.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3004)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Oct 10, 2014 this sequence version replaced NM_001191946.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582419.3144722.1,
                                           SRR22582424.1316696.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-427               JAXUCZ010000001.1  78362928-78363354
            428-558             JAXUCZ010000001.1  78366893-78367023
            559-677             JAXUCZ010000001.1  78367104-78367222
            678-837             JAXUCZ010000001.1  78375664-78375823
            838-982             JAXUCZ010000001.1  78380613-78380757
            983-1057            JAXUCZ010000001.1  78380839-78380913
            1058-1131           JAXUCZ010000001.1  78381824-78381897
            1132-1259           JAXUCZ010000001.1  78381973-78382100
            1260-1333           JAXUCZ010000001.1  78382222-78382295
            1334-1486           JAXUCZ010000001.1  78382543-78382695
            1487-1554           JAXUCZ010000001.1  78382791-78382858
            1555-1689           JAXUCZ010000001.1  78383314-78383448
            1690-1780           JAXUCZ010000001.1  78383659-78383749
            1781-1864           JAXUCZ010000001.1  78383835-78383918
            1865-1925           JAXUCZ010000001.1  78383991-78384051
            1926-2011           JAXUCZ010000001.1  78384197-78384282
            2012-2052           JAXUCZ010000001.1  78384372-78384412
            2053-2155           JAXUCZ010000001.1  78384492-78384594
            2156-2260           JAXUCZ010000001.1  78384695-78384799
            2261-2311           JAXUCZ010000001.1  78384961-78385011
            2312-2362           JAXUCZ010000001.1  78385106-78385156
            2363-3004           JAXUCZ010000001.1  78385232-78385873
FEATURES             Location/Qualifiers
     source          1..3004
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..3004
                     /gene="Ppp1r12c"
                     /note="protein phosphatase 1, regulatory subunit 12C"
                     /db_xref="GeneID:499076"
                     /db_xref="RGD:1584883"
     exon            1..427
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     CDS             95..2449
                     /gene="Ppp1r12c"
                     /note="protein phosphatase 1, regulatory (inhibitor)
                     subunit 12C"
                     /codon_start=1
                     /product="protein phosphatase 1 regulatory subunit 12C"
                     /protein_id="NP_001178875.2"
                     /db_xref="GeneID:499076"
                     /db_xref="RGD:1584883"
                     /translation="MSGEDGPAAGPGAAAAAAAARERRQEQLRQWGARAGADPGPGER
                     RARTVRFERAAEFLAACAGGDLDEARLMLRAADPGPGSGAATDPAVPPPARAVLDSTN
                     ADGISALHQACIDENLEVVRFLVEQGATVNQADNEGWTPLHVAASCGYLDIARYLLSH
                     GANIAAVNSDGDLPLDLAESDAMEGLLKAEITRRGVDVEAAKRAEEELLLHDTRCWLN
                     GGAMPEARHPRTGASALHVAAAKGYIEVMRLLLQAGYDTELRDGDGWTPLHAAAHWGV
                     EDACRLLAEHGGGMDSLTHAGQRPCDLADEDVMNLLEELAQKQEDLRNQKEASQGRGQ
                     ESQVPSNSKHRRSSVCRLSSREKISLQDLSKERRPGGAGGLPIGDEDEGEEALAEHPA
                     VEPRALNGVSSPASSSPKSPVPPEEAPFSRRFGLQKTGSSGALGPSERKGTEGVLGLQ
                     RSASSSVIEKASTQAREPRLARITPTPAQKVPEPFTLSEAAAPPSDHSAPPSRTEPGS
                     PVKPNVLTASAAPLADSRDRDRRRSYQMPVRDEESESQRKARSRLMRQSRRSTQGVTL
                     TDLKEAEKVAGKVPEPEQPALPSLDPSRRPRVPGVENAEGPAQRAEAPEGQGQGPQAA
                     REHRKAGHERRGPAEGEEAVPAERSPECSTVDGGSTVRRQRSQRDLILESKQQHEEPD
                     GGFRKLYTELRRENERLREALTETTLRLAQLKVELERATQRQERFAERPALLELERFE
                     RRALERKAAELEEELKALSDLRADNQRLKDENAALIRVISKLSK"
     exon            428..558
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            559..677
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            678..837
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            838..982
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            983..1057
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1058..1131
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1132..1259
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1260..1333
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1334..1486
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1487..1554
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1555..1689
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1690..1780
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1781..1864
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1865..1925
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            1926..2011
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            2012..2052
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            2053..2155
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            2156..2260
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            2261..2311
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            2312..2362
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
     exon            2363..3004
                     /gene="Ppp1r12c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcccccagg gcgggcgggt ggcggctgtt cgtcgcccgg cgctcgctcg ctcgctcgct
       61 cgcttggtga gcgggcgggc agcgggccgg cgcgatgtcc ggcgaggatg gcccggcagc
      121 gggcccgggg gcggcggcgg ctgcagcggc cgcccgtgag cggcggcagg agcagctgcg
      181 gcagtggggg gcgcgggcgg gcgctgaccc gggccccggg gagcggcgtg cccgcactgt
      241 ccgcttcgag cgcgccgccg agtttctggc ggcctgtgca ggcggtgatc tggacgaggc
      301 tcgcctgatg ctgcgtgcag cggatcctgg tcccgggtcc ggcgctgcga ctgaccccgc
      361 tgtccctccg cctgcccgtg cggtgctcga ctctaccaac gccgatggca tcagcgccct
      421 gcaccaggcc tgcatagatg agaacctgga agtcgttcgc ttcctggtgg agcagggtgc
      481 tactgtgaac caggcagaca acgagggctg gacgcctctg catgtggctg cctcctgtgg
      541 gtacctggac attgctaggt acctcctgag ccatggggcc aacatcgctg ctgtcaacag
      601 tgacggggac ctgcctttgg acctggctga gtcagatgcc atggagggac tgctgaaagc
      661 agagatcact cgccgaggtg tggatgtcga ggcagccaag cgggctgaag aagaactgct
      721 gcttcacgac acaaggtgct ggctgaatgg gggtgctatg ccagaggccc ggcacccccg
      781 gactggggcc tctgccctgc atgtggctgc tgccaagggc tacattgagg tgatgaggtt
      841 gctactccaa gctggctatg acacagagct ccgggatgga gatggctgga cacctttgca
      901 tgcggcagcc cactggggtg tggaggatgc ctgccgtcta ctggctgagc atggtggggg
      961 catggattca ctgacccacg cggggcagcg tccctgtgat ctggctgatg aggatgtgat
     1021 gaaccttttg gaggaactgg ctcagaaaca ggaggacctt cggaaccaaa aggaagcctc
     1081 tcagggccga ggccaggagt cacaggtccc ttcaaacagc aagcacagaa ggagctcagt
     1141 gtgccgtttg agcagccgtg aaaagatctc cctgcaggat ctatcaaagg aacgccggcc
     1201 tggtggggca ggagggctcc ctattggaga tgaggatgag ggagaagaag ccttagctga
     1261 gcatccagct gtggagccaa gagcccttaa tggtgtgtct tcccctgcgt cctccagccc
     1321 taagagccct gtgccgccag aagaggctcc cttctccagg cgctttggtc tccaaaagac
     1381 agggagctct ggtgctttgg gtccttcaga aaggaagggt acagagggag ttctcggtct
     1441 gcagcgctca gcctcctcct cagtcattga aaaggcctcc actcaggcca gggagccccg
     1501 tcttgccaga ataaccccta cccctgccca gaaagtgcca gagcccttca ccctgtctga
     1561 ggctgcagca ccgccttcgg atcactccgc tccaccctcc aggacggagc ctggatcccc
     1621 agtgaagcca aatgtcctca cagcctctgc agcaccgctg gctgactcca gggatcggga
     1681 tcgtcggagg tcctaccaga tgcctgtgcg tgatgaggag tctgagtctc agcggaaggc
     1741 tcgctcccgc cttatgcgac agtctcggag gtccacacag ggtgtaactt tgacagactt
     1801 gaaggaggca gaaaaggtgg ccggaaaggt cccagagcca gagcagcctg ccctgcccag
     1861 cctggaccct tctcggagac ctcgggtccc tggagtggag aacgctgagg gccctgccca
     1921 gagagcagag gcgcccgaag ggcagggcca gggaccacag gcggccaggg aacatcgaaa
     1981 agctggccat gagcggaggg ggccggcaga gggggaagag gcggtgcctg cggaacggag
     2041 cccagagtgc agcactgtgg atggtggatc cacggtccgc aggcagcgct cacagagaga
     2101 cctcattcta gaatccaagc agcaacacga agagcctgat ggaggcttcc ggaagctgta
     2161 cacggagctc cgcagggaga atgaacgact tcgtgaagcc ttgacagaga ccaccctgcg
     2221 tctggcacag ctcaaggtgg agctggagcg ggccacacag cggcaggaac gctttgctga
     2281 gaggcctgcc ctccttgaac tggagagatt tgagcgcaga gctcttgagc gaaaggcagc
     2341 agagctggag gaggagctga aggccctgtc tgatctccgg gctgacaacc aacggctcaa
     2401 ggatgagaat gcagcattga tccgagtcat tagcaagcta tccaagtgac tctgaaggag
     2461 ttcccgcacc atatttatac tgctgcttct gacacacgca ccctttcccc cgcgtgaaca
     2521 tgagtgacaa ggctctgggg gaagttgctg agaagccata acctctcggg acctcagaac
     2581 cgggaggaaa gcacagagtc cccaggaacc aaggggttct ctgaggtcag gatagaggtg
     2641 ggaggctgag ccaggtaggg agatgttgct gagatgttgc tctgagcatc agagatggga
     2701 ccaagaagga aacaaggacc aagaaatgca aagataagta tccagaagca gagtggttgc
     2761 cccagggtcc cacctcacgt gtgatgctac ccagcactcc tccccccctc cccagcaggg
     2821 accaggaatg tgccaagagt cccactggcc tctgccaggt gggcctgtat atagggtcca
     2881 tgtgcaatag ggagggatgt tctatttttg ctgcctcctc cccacctatt gtctggggag
     2941 gaggagaagg tatttttgag acaaagcaca ggcaccataa ataaagtcgt gacattgcca
     3001 ctca
//
