LOCUS       XM_017601826            1590 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus peptidylprolyl isomerase like 6
            (Ppil6), transcript variant X1, mRNA.
ACCESSION   XM_017601826
VERSION     XM_017601826.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017601826.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017601826.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1590
                     /gene="Ppil6"
                     /note="peptidylprolyl isomerase like 6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 7 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:685567"
                     /db_xref="RGD:1592581"
     CDS             31..1029
                     /gene="Ppil6"
                     /codon_start=1
                     /product="probable inactive peptidyl-prolyl cis-trans
                     isomerase-like 6 isoform X1"
                     /protein_id="XP_017457315.1"
                     /db_xref="GeneID:685567"
                     /db_xref="RGD:1592581"
                     /translation="MASQQPCRPKTKPPECQTELPPEPPLKLKVVGLFKSSSFQMSKT
                     IAETLKANYPSRFEDPVIIPLQEFAWDRYLEEKKRELKGETWVYSSYVICFINDQLLG
                     NALDLKKWAQKVWDVVDIRPSALYEALTLDYATKFLKDTKHDFVFLDISIDLAPIGRL
                     IFELYCDACPRTCTNFQVLCTGTSGFSERGIKLHYKDSIFHRVVKNGWVQGGDIVEGR
                     GDDGESIYGPTFEDENFSVPHNKRGVLGMVNKGHHTNGSQFYITLQATPYLDKKYVAF
                     GLHSILYMPHLHDDIIPHSGTYVNIREAVSGSCISWTLYSAHSNSLKEPKFLDVSN"
ORIGIN      
        1 ttgtgttccg ggctttccgc tagctctgcc atggcctctc agcagccgtg ccggccgaag
       61 acgaagcccc ccgagtgcca aacggagttg cctccggagc cgccgctgaa gctgaaggtg
      121 gtggggctct tcaaaagctc cagctttcag atgtcgaaga ccatcgctga gactttgaaa
      181 gccaattacc catccagatt cgaagatcct gtgataattc ctcttcaaga atttgcttgg
      241 gatcggtatc tggaggagaa aaagagggaa ctgaagggtg aaacctgggt ctattcctcc
      301 tatgtgatat gctttatcaa tgaccagctc ctgggtaacg cacttgatct gaagaagtgg
      361 gcccagaagg tgtgggatgt ggtcgatatc cggcccagtg cactgtacga ggcgcttact
      421 ctggactatg ccacgaagtt cttgaaggac accaagcatg attttgtgtt cttggacatt
      481 agtattgatc ttgctccaat tggaaggctg atttttgaac tatattgtga tgcgtgcccc
      541 agaacatgta caaattttca ggtcttgtgc acaggaacat cagggttttc tgagagaggc
      601 ataaagcttc actacaaaga ttcgattttt catcgagtag tcaagaacgg ttgggtacaa
      661 ggaggagata tagtagaagg acgaggggat gacggagagt ctatttatgg accaacgttt
      721 gaagatgaaa acttttcggt tcctcataat aagcggggag ttcttggaat ggtcaacaaa
      781 gggcatcata ccaatggttc gcaattctac atcacactgc aagcaactcc ctatctggat
      841 aaaaaatacg tggcttttgg gcttcattct atcctgtaca tgcctcacct gcatgacgac
      901 atcatcccac actctggcac atatgtgaac atacgtgaag cagtgagtgg gtcttgcata
      961 tcttggaccc tatactcagc acacagcaac tcattgaagg aaccgaagtt cttagacgtc
     1021 tcgaattagt cccaacagag aacgaaagac cgttggtcct ttgcagtatc acagacagtg
     1081 ggattcttta tacatgattt tcacaccagt caccttctcc gtggtgcttt gttgctgtgc
     1141 atttggtcag ctgttcctat ctttaattaa atggtgcttg ataatattgg gaggcaatgg
     1201 cagacacagc aggctgtgtc taacacttca tcattgcccc ctttcctctc cccccccccc
     1261 catcacacag gctacaaaaa caaaatactc agtttcctgg gctcctttac aacggagagc
     1321 catttgagag caccgtggct aatgggtcag agggaagcca gcgatctggc tcccactcct
     1381 tcttgaatac agataggctg gaagccaggg ccactgctgg gctgtcagcc tcagccttac
     1441 cacctcctat ttctggtctt ttttactaca caaggcagaa agacctctcg gttctattcc
     1501 cggtggctct tttgttactc gtggctttga acattattaa cctagcaatg taccaagtga
     1561 ttttttaaat ctaaagcatt tgtaaatgaa
//
