LOCUS       NM_031793               3926 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus peptidylprolyl isomerase G (Ppig), mRNA.
ACCESSION   NM_031793 XM_346654
VERSION     NM_031793.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3926)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 3926)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 3926)
  AUTHORS   Davis,T.L., Walker,J.R., Campagna-Slater,V., Finerty,P.J.,
            Paramanathan,R., Bernstein,G., MacKenzie,F., Tempel,W., Ouyang,H.,
            Lee,W.H., Eisenmesser,E.Z. and Dhe-Paganon,S.
  TITLE     Structural and biochemical characterization of the human
            cyclophilin family of peptidyl-prolyl isomerases
  JOURNAL   PLoS Biol 8 (7), e1000439 (2010)
   PUBMED   20676357
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 3926)
  AUTHORS   Mesa,A., Somarelli,J.A. and Herrera,R.J.
  TITLE     Spliceosomal immunophilins
  JOURNAL   FEBS Lett 582 (16), 2345-2351 (2008)
   PUBMED   18544344
  REMARK    Review article
REFERENCE   5  (bases 1 to 3926)
  AUTHORS   Hoffert,J.D., Pisitkun,T., Wang,G., Shen,R.F. and Knepper,M.A.
  TITLE     Quantitative phosphoproteomics of vasopressin-sensitive renal
            cells: regulation of aquaporin-2 phosphorylation at two sites
  JOURNAL   Proc Natl Acad Sci U S A 103 (18), 7159-7164 (2006)
   PUBMED   16641100
REFERENCE   6  (bases 1 to 3926)
  AUTHORS   Mortillaro,M.J. and Berezney,R.
  TITLE     Matrin CYP, an SR-rich cyclophilin that associates with the nuclear
            matrix and splicing factors
  JOURNAL   J Biol Chem 273 (14), 8183-8192 (1998)
   PUBMED   9525923
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            [WARNING] On Jul 17, 2024 this sequence was replaced by
            NM_031793.3.
            
            On Nov 26, 2020 this sequence version replaced NM_031793.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF043642.1, SRR26360181.1113206.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-154               JAXUCZ010000003.1  74891846-74891999
            155-258             JAXUCZ010000003.1  74892854-74892957
            259-326             JAXUCZ010000003.1  74900455-74900522
            327-404             JAXUCZ010000003.1  74900909-74900986
            405-479             JAXUCZ010000003.1  74901076-74901150
            480-587             JAXUCZ010000003.1  74901527-74901634
            588-632             JAXUCZ010000003.1  74901908-74901952
            633-720             JAXUCZ010000003.1  74903093-74903180
            721-750             JAXUCZ010000003.1  74904416-74904445
            751-890             JAXUCZ010000003.1  74904540-74904679
            891-1098            JAXUCZ010000003.1  74910538-74910745
            1099-1266           JAXUCZ010000003.1  74912796-74912963
            1267-1354           JAXUCZ010000003.1  74914906-74914993
            1355-1491           JAXUCZ010000003.1  74918004-74918140
            1492-3926           JAXUCZ010000003.1  74918316-74920750
FEATURES             Location/Qualifiers
     source          1..3926
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q21"
     gene            1..3926
                     /gene="Ppig"
                     /note="peptidylprolyl isomerase G"
                     /db_xref="GeneID:83624"
                     /db_xref="RGD:620315"
     exon            1..154
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            155..258
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            259..326
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            327..404
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     CDS             344..2602
                     /gene="Ppig"
                     /EC_number="5.2.1.8"
                     /note="PPIase G; matrin-cyp; rotamase G; cyclophilin G;
                     peptidyl-prolyl isomerase G; matrin cyclophilin
                     (matrin-cyp)"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase G"
                     /protein_id="NP_113981.2"
                     /db_xref="GeneID:83624"
                     /db_xref="RGD:620315"
                     /translation="MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLC
                     TGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAV
                     KHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTD
                     AASKPFAEVRILSCGELVPKSKVKKEEKKRHKSSSSSSSSDSDSSSDSQSSSDSSDSE
                     SASEEKSRKRKKKHRKNSRKHKKEKKKRKKSKKSPSSESEADNVDAQPQSTVRPEEIP
                     PIPENRFLMRKSPPKADDKERKNRERERERECNPPNSQPASYQRRFLVTRSGRKIKGR
                     GPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKEN
                     QRSPVRVKEKKITDHRHMSESPNRKIEKEKKVKDHKSESKERDIRRNSEKDDKYNKNK
                     VKKRGKSKSRSKSKERSKSKERDSKHSRHEDKRVRSRSKERDHETTKEKEKQLDSKGK
                     DQERSRSKENSKQVESKSNEHDHSKSKEKDRRAQSRSRERDLTKSKHSYNSRTRERSR
                     SRDRSRRVRSRSHDRDRSRSKEYHRYREQEYRRRGRSRSRDRRTPGRSRSKDRRRRRR
                     DSRSSEREESQSRNKEKYRSQDSKSSHRKENSEGEKRMYSKSRDHSSSNNNREKKADI
                     DQSPVSKTKQSSQDNEVKSSTLKNQEDEKTRSPVEKENQKSKGQENDHVHDKNKKCDH
                     ESSPGTDEDKSG"
     exon            405..479
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            480..587
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            588..632
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            633..720
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            721..750
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            751..890
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            891..1098
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            1099..1266
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            1267..1354
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            1355..1491
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
     exon            1492..3926
                     /gene="Ppig"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgacgtactt ccggcgcgac attttccctc cacgcctgga ctgggctgtg ggggagggag
       61 gcggttagtg ggctttagcg cctttcccga cggcggtaga tttgaagcgc ttcggaggac
      121 cgggcccgga gaagagaagc ccgtggcggt gcaggagtac attccttggg ccatgagacg
      181 ctctcttttt tgtttgtttt tgatcaccag tacatctaag aagtaataga gtgtggagct
      241 aaatccagaa agaataagga acaaaacgat tgactcagtt atccttggtg ggttttcgtt
      301 ttttattgtt tcccctaaac tgaaagactg aagtgtcgga accatgggaa taaaggttca
      361 gcgtcctcga tgtttttttg acattgccat taataatcaa cctgctggaa gagttgtctt
      421 tgaattattt tccgatgtat gtcccaaaac gtgtgagaac tttcgttgtc tttgtacagg
      481 tgaaaagggg acagggaaat caactcagaa gccattacat tataagagct gtctctttca
      541 tagagttgtc aaggatttca tggttcaggg tggtgacttc agtgaaggga atggaagagg
      601 aggagaatca atttatggag gattctttga agatgagagt tttgctgtta aacacaacaa
      661 agagtttctc ttatcaatgg ccaacagagg gaaggataca aatggctctc agttctttat
      721 aacaacgaaa ccaactcctc atctagatgg gcatcatgtt gtctttgggc aagtgatctc
      781 tggtcaggaa gttgtgagag agatcgaaaa ccagaaaaca gatgctgcta gcaaaccgtt
      841 tgctgaggtt cggatactca gttgtggaga gctggttccc aagtctaagg ttaagaaaga
      901 agaaaagaaa aggcataagt catcatcttc gtcgtcgtcc agtgattcag atagctcaag
      961 tgattctcag tcctcctctg attcttctga ttctgaaagc gcttctgaag aaaaatccag
     1021 aaaaaggaaa aagaaacata ggaaaaattc ccgaaagcat aagaaggaga agaagaagag
     1081 aaagaaaagc aagaaaagcc cgtccagtga aagtgaagca gacaatgttg atgcacagcc
     1141 ccaatctact gtccgtccag aagagatccc acctatacca gaaaacagat tcctaatgag
     1201 gaagagtcct cctaaagctg atgacaagga aaggaaaaac agagagagag aaagagaaag
     1261 agagtgtaac ccacctaact cccagcctgc ctcataccag cgacgattct tagttactag
     1321 gtctggcagg aagattaaag gaagaggacc aaggcgttat cgaactcctt ccagatccag
     1381 atcgagggat cgattcagac gaagtgagac tcctccacat tggagacaag agatgcagag
     1441 agctcagaga atgagggtgt caagtggtga aagatggatc aaaggggata agagtgagtt
     1501 aaatgaaata aaagaaaatc aaagaagccc agttagagta aaagagaaaa aaataacaga
     1561 tcatagacac atgtctgaga gtccaaacag aaaaatagag aaggaaaaga aagttaaaga
     1621 ccataaatct gaaagcaaag agagagacat cagaagaaat tcagaaaaag atgataaata
     1681 taataaaaac aaggtgaaga aaaggggcaa atccaagagt aggagcaaga gcaaggagag
     1741 atccaagagt aaggagcgag actcaaagca cagtagacac gaagacaaga gggtgaggtc
     1801 cagaagtaaa gaaagggatc atgagactac taaagaaaaa gaaaaacagt tggattctaa
     1861 agggaaagat caggaaagga gtagaagcaa agagaactcc aaacaggtag aatcgaaaag
     1921 taatgaacat gatcatagta aaagtaaaga aaaggataga cgtgcacagt ctaggagtag
     1981 agaacgggat ctaactaaaa gcaaacacag ttacaacagt agaacaaggg agcgaagcag
     2041 aagtagggac aggagcagaa gagtgcggtc cagaagccat gaccgagatc gcagcagaag
     2101 caaggagtac catagataca gagaacagga gtataggagg agaggaaggt cacgaagccg
     2161 ggatcgaaga acaccaggac gatcgagaag taaagatagg aggagaagaa ggagggattc
     2221 ccggagctca gagagagaag aaagtcaaag tagaaacaaa gaaaaatata gaagccaaga
     2281 cagtaagagt tcacacagaa aagaaaattc tgagggcgag aaaagaatgt actctaaaag
     2341 tcgtgatcat agtagctcaa ataataacag ggaaaaaaaa gctgacatag atcaaagtcc
     2401 agtgtccaaa acaaagcaaa gcagtcagga caatgaagtg aagtcctcca cgttaaaaaa
     2461 tcaagaggat gagaagacca gatccccagt ggagaaagaa aaccaaaaat caaagggtca
     2521 agaaaatgac catgtacatg acaaaaataa aaagtgtgat catgaatcga gccccggaac
     2581 agatgaagac aaaagcggat gagtgagttg tgtacactta ttccttcctg tctcagagtc
     2641 tacgttttca agagcctccc tccctccctt gctgttttca ttgttttgga gttgttttat
     2701 gtttgtgtcc ccccacccca ccccacccct ttttttttaa tgtggacttt attgagttga
     2761 tcttttgata atctgctacc tggataattt gtactgctac agttttaata aacttgaaat
     2821 gaaaagcaaa acaaggcttt ggtgtagtac tgtgtgcttg ttaagctcct gtgcagtcat
     2881 tttcgtgctg cagcagtccg cagcagccga ctctgcttag tcagccactt ggaaacaacc
     2941 tcaaccgtgg gttgcagtac attgttatac aggctgtgtt tcttttgata caaatccctt
     3001 tagaaaccac ttgaagtttt gtatagcctt ttgagttttg gtttttcatt tctaattcat
     3061 aggcttatag cagtttctcg aattaacaga agcaggatcc ttatatgtga tctcaaacct
     3121 tcacttgatt ttacagttat ttgtgcttta gttgcttttt tgtgctttat accttacact
     3181 ttacaattcc agctgtagct tgttccttac tattgtccat gttgctctgt gagctgtaag
     3241 aatgaggtga atgctgtttt cagttcgtgt ggtgattgag cttgagttgc tgttatacag
     3301 catttgacag aaattagacc ctggaagacc agactgtaat tctcaattct ttgttgtttt
     3361 tggtgggaag agctgaaatt attgcttttt taaaacatgt tattaccttt ttctacaatt
     3421 taaaaaattc atttctcatt aaaacatact acttgtgtag gtccttctta agctagacag
     3481 attctaaaaa gcattagtat tggaaaatac gatttcccta ttttggctat tagcctatat
     3541 cacatggagt gttaattctg catgatttgg gttttgtttt taaacttgga ctgacttctc
     3601 taattctcat agctgttaat ctgaaatgtc aagaagatgc atctctctat atctgtacca
     3661 tgataggctg tagcatgttt gtgactctgg ttttttctgt tcagatggct ttagaccagt
     3721 ttattgttaa cattatttta ccttggcatg tataacattg ccatatagat tagaatagaa
     3781 cgttgcaaaa tataccgtac agagttaaac actaaacata gccaaagtcc attcagaatt
     3841 ttgtgtgttg tattttacta tttttgtgat gtgtggtctt ttattctgta atatccttct
     3901 aaataaaaca ttgaacatcc agcaaa
//
