LOCUS       XM_017599085             753 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus peptidylprolyl isomerase A (Ppia),
            transcript variant X1, mRNA.
ACCESSION   XM_017599085
VERSION     XM_017599085.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017599085.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017599085.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..753
                     /gene="Ppia"
                     /gene_synonym="CYCA; CyP-A; p1B15; p31"
                     /note="peptidylprolyl isomerase A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 46 ESTs, 230 long SRA reads, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 156 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:25518"
                     /db_xref="RGD:3372"
     CDS             234..548
                     /gene="Ppia"
                     /gene_synonym="CYCA; CyP-A; p1B15; p31"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase A isoform
                     X1"
                     /protein_id="XP_017454574.1"
                     /db_xref="GeneID:25518"
                     /db_xref="RGD:3372"
                     /translation="MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAG
                     PNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMSIVEAMERFGSRNGKTSKKITISDCG
                     QL"
ORIGIN      
        1 taagctgcgg cgctgcagcc ctgcgggcct cttccccact accttccccg agccgctgcc
       61 ttttaatcgg ggctgggtag gaactctgcc taaggtccaa ggacgaaggt tcggtgaagc
      121 cgctgtttgc agacaaagtt ccaaagacag cagaaaactt tcgtgctctg agcactgggg
      181 agaaaggatt tggctataag ggttcctcct ttcacagaat tattccagga ttcatgtgcc
      241 agggtggtga cttcacacgc cataatggca ctggtggcaa gtccatctac ggagagaaat
      301 ttgaggatga gaacttcatc ctgaagcata caggtcctgg catcttgtcc atggcaaatg
      361 ctggaccaaa cacaaatggt tcccagtttt ttatctgcac tgccaagact gagtggctgg
      421 atggcaagca tgtggtcttt gggaaggtga aagaaggcat gagcattgtg gaagccatgg
      481 agcgttttgg gtccaggaat ggcaagacca gcaagaagat caccatctcc gactgtggac
      541 aactctaatt tctttgactt gcgggcattt tacccatcaa accattcctt ctgtagctca
      601 ggagagcacc cccaccccat ctgctcgcaa taccctgtaa tctctgctct cactgaagtt
      661 ctttgggttc catattttcc tcattcccct tcaagtctag caggattgca aagttaagtt
      721 tatgattatg aataaaaact aaatgagaag tgt
//
