LOCUS       XM_039102462            1019 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus inorganic pyrophosphatase 2 (Ppa2),
            transcript variant X2, mRNA.
ACCESSION   XM_039102462
VERSION     XM_039102462.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039102462.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1019
                     /gene="Ppa2"
                     /gene_synonym="RGD1307965"
                     /note="inorganic pyrophosphatase 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 50 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:310856"
                     /db_xref="RGD:1307965"
     CDS             130..858
                     /gene="Ppa2"
                     /gene_synonym="RGD1307965"
                     /codon_start=1
                     /product="inorganic pyrophosphatase 2, mitochondrial
                     isoform X2"
                     /protein_id="XP_038958390.1"
                     /db_xref="GeneID:310856"
                     /db_xref="RGD:1307965"
                     /translation="MVVEIPRWTNAKMEIATEEPLNPIKQDTKNGRLRYTPNIFPHKG
                     YIWNYGALPQTWEDPHLKDKSTNCCGDNDPIDVCEIGSKVLSRGDVVHVKILGTLALI
                     DQSETDWKIIAINVNDPEAEKFHDIDDVKKFKPGYLEATVNWFRLYKVPDGKPENKFA
                     FNGEFKNKAFALEVINSAHEHWKEMVMKKCDKGAISCVNVHICDSPFHCTTEEARSLV
                     ESIPTPSMSKESSVEEEVWHFLRN"
ORIGIN      
        1 gcgtcggccg agggtggcgc gtgggggccg ccgccctccc tccgcgccgc gtaatgtccc
       61 tgtaccgcac ggaggagctg ggccatcccc gctcgaagga ttaccgcctg ttcttcagct
      121 tcgtttaata tggttgtgga aatacctcgg tggacaaatg ccaagatgga gattgccacc
      181 gaggagccac tgaaccccat taagcaagac accaagaacg ggaggctgcg ctacaccccg
      241 aacatcttcc cccacaaggg ctacatatgg aattacgggg ccctccctca gacctgggaa
      301 gatcctcatc taaaagacaa gagtacaaac tgctgtggag acaacgaccc cattgacgtt
      361 tgtgaaatag gctccaaggt tctttcccgt ggagacgtgg tccatgtgaa gatcctgggg
      421 actttggcac ttatcgatca gagtgaaaca gattggaaaa taattgctat caatgtgaat
      481 gatcctgagg ctgaaaaatt tcatgatatt gatgatgtta agaagttcaa accaggttac
      541 ctagaagcca ctgtcaattg gtttagactc tataaggtac cagatggaaa accagaaaac
      601 aagtttgctt ttaatggaga attcaaaaac aaggcttttg ccctcgaagt tattaactct
      661 gcacatgaac attggaaaga gatggtgatg aagaagtgtg acaagggagc tatcagttgt
      721 gtgaacgtgc acatctgtga tagccctttc cactgcacta cagaggaagc aaggtcacta
      781 gttgaatcga tcccaacacc ttcaatgagt aaagaaagca gtgtagaaga agaagtgtgg
      841 cacttcctcc gcaactgatg gggactctgg ggcttctgca ctgagacttt aaacctccga
      901 ggaccccggg gactcctttt cctttagtgc tcttgtgaag caagtggatg accgtctgat
      961 aacttcctgt ccgacatcat tgttaaaact ttttaaataa acttgtaaat aaatactaa
//
