LOCUS       NM_001134567            2461 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus protein phosphatase 2C-like domain containing 1
            (Pp2d1), mRNA.
ACCESSION   NM_001134567 XM_001065631 XM_236834
VERSION     NM_001134567.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474184.1.
            
            On or before Sep 4, 2008 this sequence version replaced
            XM_236834.4, XM_001065631.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..2461
                     /gene="Pp2d1"
                     /gene_synonym="RGD1564811"
                     /note="protein phosphatase 2C-like domain containing 1"
                     /db_xref="GeneID:316157"
                     /db_xref="RGD:1564811"
     exon            1..248
                     /gene="Pp2d1"
                     /gene_synonym="RGD1564811"
                     /inference="alignment:Splign:2.1.0"
     CDS             220..2097
                     /gene="Pp2d1"
                     /gene_synonym="RGD1564811"
                     /note="PP2C-like domain-containing protein C3orf48
                     homolog"
                     /codon_start=1
                     /product="protein phosphatase 2C-like domain-containing
                     protein 1"
                     /protein_id="NP_001128039.1"
                     /db_xref="GeneID:316157"
                     /db_xref="RGD:1564811"
                     /translation="MDFEIYSPVRVFLKSKQWDEKTSKFTSDEALPTVRTNVRRRSRL
                     PRMNDPEESTDQLTSVDMGDMVTFPCSVCHQELNTAGNFLHKKHHNALSTLGFEWMGG
                     RKPKPKMVSFHRECIISNLLRSSTYSEKVLQSMNYAFELLRKKQIPSYFKLCDKVGET
                     SIYSPTSYHLLIKGIAICSNSNSTWKAEPNCKFTVVNDFGDKANVCFFGLFDSHHGYA
                     AADLASKEFQVLLLHQLSVQDPSYQMTAEQQDLINSFHTVFREEYRAREEAFSSTYKT
                     FRTNKREYEDVHKAFAKAFWRMDRLLRLGRNEVSRVRWSGCSALTCILEGGIKNPQAT
                     KDWEKTYQHGVNSSPFQKIPQIISGVLHIANAGNVQAVLCRNGKGFCLTKEHTTRNTK
                     ERRRVLYSEVGISSDDPYGLLDGHIKTTRGLGFHGNLRLKKAIIPVPQTISVPIDDLC
                     QFLILATNGLWQVLDKKEVTALVITLFHAYKETCVSGPRNKPWPSKSLLFPPDSNIRV
                     LFQYQPENEDITSTTDVMKRLSDSPFADTNIHQDTSAETFLPKATSYDPYSTKESNSL
                     PTTNSKQESEKEICIKNFYKGAAEYIGCQLVSAAIEGGSRDSITVMVMFLNGSEYHRR
                     T"
     exon            249..1318
                     /gene="Pp2d1"
                     /gene_synonym="RGD1564811"
                     /inference="alignment:Splign:2.1.0"
     exon            1319..2461
                     /gene="Pp2d1"
                     /gene_synonym="RGD1564811"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cattgtaata gggagtctcc atcaatcaga gaagacccca cctccaccat caccactccc
       61 ttcactgctt gccataacca catctgtttc atccctcctc ctttcctccc ttcctcttcc
      121 tttttcttcc ctataccctc tcacctgtgc tcaagataga cagaggttct gcaaataaag
      181 taaaggaagg acaaagaaaa gtattacgtc caaaagaaca tggattttga aatatatagc
      241 cctgtaagag tttttttgaa atcaaaacaa tgggatgaga aaacttcaaa atttacttca
      301 gatgaggctc tcccaactgt cagaacaaat gtcagaaggc gtagtagact gccacgaatg
      361 aatgacccag aggagtccac tgaccagctg acttcggttg acatgggtga catggtcaca
      421 ttcccctgct ctgtctgcca ccaagaactg aacacagctg ggaattttct ccataagaaa
      481 catcacaatg ctctgagtac gctgggtttc gagtggatgg gagggaggaa accaaagccc
      541 aaaatggtca gttttcacag agagtgtata atttctaacc ttttgagatc ttctacatac
      601 agtgaaaaag tccttcagag tatgaattat gcatttgagc ttcttaggaa gaaacaaatt
      661 ccgtcgtact tcaaactttg tgacaaggtc ggagagactt ctatatattc tccaaccagc
      721 taccaccttc tgattaaagg tatagccatc tgtagcaata gtaattcaac ctggaaagct
      781 gagcccaact gtaaattcac ggtcgtgaac gactttggcg ataaagccaa tgtgtgcttt
      841 ttcggtttat ttgatagtca tcatggttac gcagcagcag acctggcatc aaaggagttt
      901 caggttttac ttctccatca actgtctgta caggatcctt cctaccagat gacagccgag
      961 caacaggatc tcatcaattc ctttcacacg gtgttcaggg aagaatacag agccagagaa
     1021 gaggccttct cttccacata taaaaccttc agaaccaata aacgggagta tgaggatgta
     1081 cacaaagcgt ttgccaaggc attctggaga atggataggc ttctacggct gggaaggaac
     1141 gaggtctccc gggttcggtg gagcggctgt tcagcactca cgtgtatatt agagggtggg
     1201 atcaagaacc cacaggctac taaggactgg gaaaaaacct atcagcatgg tgttaacagc
     1261 tctcccttcc agaagattcc ccagatcatc tctggagtac tacacattgc aaatgctgga
     1321 aatgtacaag cagtcttatg cagaaatgga aaaggatttt gcctgaccaa ggagcacact
     1381 acacgaaaca ctaaagaaag aagaagagta ctttacagcg aagtagggat cagttcagat
     1441 gacccctatg gtctcctgga tgggcacata aaaaccacca ggggtcttgg attccatgga
     1501 aacctcagac taaaaaaggc cattattcca gtaccacaaa caatttctgt ccctatagat
     1561 gatttatgtc agtttctcat cttagccacc aatggacttt ggcaagtttt ggacaagaag
     1621 gaagtcactg cactggtaat cactttgttt cacgcatata aagaaacatg tgtttctggc
     1681 cctagaaata aaccctggcc atctaaaagc ctgcttttcc caccagacag taacatccgc
     1741 gtgctgttcc aataccagcc tgaaaatgaa gacattacgt caactacaga tgtaatgaaa
     1801 aggttatctg actcaccatt tgctgacacc aacattcatc aagatacatc tgcagaaaca
     1861 tttctaccaa aagcgacctc ttatgaccct tatagcacaa aagagagtaa tagcttaccc
     1921 actacgaaca gtaagcagga aagtgagaaa gaaatatgta ttaagaactt ctataaaggt
     1981 gcagctgagt acattggctg tcaactggta agtgctgcaa tagaaggtgg ttccagagac
     2041 agcatcactg ttatggtaat gtttctcaat ggaagtgagt atcacaggcg gacatgaaac
     2101 actccaatga cctagaacag tactacaaag acgcctgtga gaaccattcc tcagaaaagg
     2161 aaggaaacgc aaaagttgca gcttatacat catgtgtatt atggtataca ctttatgtca
     2221 aagacagaga aaactcggtg ttgcttttta caccacttta ttccaacctg agcacctcaa
     2281 tataaaacta aacactggtg agctgttctc cttactaatt ttgagttact gtaaaatgta
     2341 cacattctgc tagcagatca acacttaaat agattaaatc atctgacaca tggtagattt
     2401 catataatga aaatacctaa aataattagt gcaatatact gattaaaata aaatggactt
     2461 c
//
