LOCUS       XM_008766355            1444 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus POU class 2 homeobox associating
            factor 2 (Pou2af2), mRNA.
ACCESSION   XM_008766355
VERSION     XM_008766355.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008766355.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008766355.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1444
                     /gene="Pou2af2"
                     /note="POU class 2 homeobox associating factor 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 8 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:500997"
                     /db_xref="RGD:1562914"
     CDS             244..1107
                     /gene="Pou2af2"
                     /codon_start=1
                     /product="POU domain class 2-associating factor 2"
                     /protein_id="XP_008764577.2"
                     /db_xref="GeneID:500997"
                     /db_xref="RGD:1562914"
                     /translation="MDSVPGDYSKRVYQGVRVKHTVKDLLAEKRSRQTSNSRLNGSVS
                     SSQPPFVQMPGSPVMSGYYGVRRSFLSDSDFHSGKQFSNDLYMSSVTKPFACESSAGQ
                     SHTGLLESYLAEPYGDYRPPALTPTPGSLFSTSALPPLLPPPFPSDPTHFVFRDSWEQ
                     TVPDGPSQPDPMPADALQTLPPSTSCLSQLESGSSTQHRNMGWGASLAGAQPYSLHAL
                     EDLHHTPGYPTPPPYPFTSFMTVSNDLPPKVGPLSPEEGSDVSSLHDPSPWTKEDGSM
                     AWGSYECRRAY"
ORIGIN      
        1 actgaataaa aatccttaga gaaggggaaa agtaccttca tatataatct gcattgggga
       61 tgcaaattgg agagaaacat acaccaaagg atttgcattt aatcaaatct aaagcaagtg
      121 acttcagaag catcactcag tgtgcagaag tcttcccacc aggagcaggc taagctatcc
      181 aagagatcag gacccctcgc taaggacatt tctcagaggc ctggcactgt ggcactaccc
      241 aggatggaca gcgtcccagg agattacagc aaacgtgtct accagggtgt gcgagtgaag
      301 cacacagtca aggatctcct agcagaaaag cgctccagac agacaagtaa ctccagactc
      361 aatggcagcg tcagctcctc tcaacctccg ttcgtccaga tgccaggatc accagtgatg
      421 tcaggttact acggggtcag gaggtctttc ctgtctgact ccgacttcca tagcggcaaa
      481 cagttctcaa atgacctcta catgtccagc gtgaccaagc cctttgcctg tgagtcctca
      541 gctggacaga gtcacacagg cctgctggag tcctacctgg cagagcccta cggggactac
      601 cgcccaccgg cgctgacgcc cacgccgggt tccctgttca gcacttcggc tctgccacca
      661 ctcttgccac ctccgttccc cagcgaccca actcatttcg tctttagaga ctcctgggaa
      721 cagacggtac cagatggtcc cagccagcca gaccctatgc ctgccgatgc cctgcagacc
      781 ttgccaccca gcaccagttg tctctcccaa ctggagtcag gaagcagcac ccagcacagg
      841 aacatggggt ggggggcgtc ccttgctggg gctcagccct actcgctgca tgccctggaa
      901 gacctgcacc acacaccggg gtaccccacc ccacctcctt accccttcac ttctttcatg
      961 acagtgtcaa atgacctccc acccaaggtg gggcccctct ccccagagga agggtcagat
     1021 gtctcttccc ttcatgatcc ttcaccttgg acaaaagaag atggcagtat ggcctggggc
     1081 tcttatgaat gccggagagc ttactgagga gcaggccaga ggacttctgc atccttatag
     1141 aagctggacc ctgtgtccac agattcttct aggcgtgcta gttcattccg aactggattt
     1201 tagtttacag cacgattctg tcagtgtcct gacatctctg ctcttatcca atgtaaaaaa
     1261 cccctacaaa acactacaat gtcaatcaaa tattttgtgg gtcgcatcct aatgagacgc
     1321 cctctacaag gaggccactt tagaactttg gttacccatt tcattctaaa atttctgtta
     1381 cctttaaagc attgtttttt tggcactggt tatttttctt atattgcatt aaaaaaactt
     1441 tatg
//
