LOCUS       XM_002728532            1946 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus POTE ankyrin domain family, member F
            (Potef), mRNA.
ACCESSION   XM_002728532
VERSION     XM_002728532.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_002728532.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1946
                     /gene="Potef"
                     /note="POTE ankyrin domain family, member F; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 43 ESTs, 10 long SRA reads, 518 Proteins, and
                     97% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:684969"
                     /db_xref="RGD:1584390"
     CDS             1..1245
                     /gene="Potef"
                     /codon_start=1
                     /product="POTE ankyrin domain family member F"
                     /protein_id="XP_002728578.2"
                     /db_xref="GeneID:684969"
                     /db_xref="RGD:1584390"
                     /translation="MCTRMIEFDIANHGLAHTSPPAYTAFLSAAPSSRPLPIAMEEEI
                     AALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
                     ILTLKYPNEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
                     IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
                     LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE
                     KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYA
                     NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ
                     QMWISKQEYDESGPSIVHRKCF"
ORIGIN      
        1 atgtgcactc ggatgataga gttcgatatt gcaaaccacg ggctcgctca cacttcgccg
       61 ccggcttata ctgcgtttct ttccgctgct ccgtcgtccc gtcctctgcc gatcgcaatg
      121 gaagaagaaa tcgccgccct cgtcattgac aatggctccg gcatgtgcaa agctggcttt
      181 gctggggacg acgcccccag ggccgtgttt ccttccatcg tcgggcgccc ccgacaccag
      241 ggtgtcatgg tgggcatggg ccagaaagac tcgtacgtgg gtgatgaggc ccagagcaag
      301 aggggtattc tgaccctgaa gtaccctaat gagcacggca ttgtcaccaa ctgggacgac
      361 atggagaaga tctggcacca caccttctac aacgagctgc gtgtggcccc tgaggagcac
      421 ccggtgcttc tgaccgaggc ccccctgaac cccaaagcta acagagagaa gatgacgcag
      481 ataatgtttg aaaccttcaa taccccagcc atgtacgtgg ccattcaggc ggtgctctcc
      541 ttgtatgcat ctgggcgtac cactggcatt gtcatggact ctggtgacgg ggtcacacac
      601 acagtgccca tctatgaggg ctacgccctt ccccacgcca tcttgcgtct ggacctggct
      661 ggccgggacc tgacagacta cctcatgaag atcctgactg aaaggggcta cagctttacc
      721 accactgctg agagggaaat tgttcgtgac ataaaggaga agctgtgcta tgttgccctg
      781 gattttgagc aagaaatggc tactgctgca tcatcttcct ctttggagaa gagttatgag
      841 ctgcctgatg ggcaggtgat caccattggc aatgagcgct tccggtgtcc agaggctctc
      901 ttccagcctt ccttcctggg catggagtcc tgtggcatcc acgagaccac cttcaactcc
      961 atcatgaagt gtgatgtgga catccgcaaa gacctgtatg ccaacacagt gctgtctggt
     1021 ggtaccacca tgtatccagg cattgctgac aggatgcaga aggagatcac agccctggct
     1081 cccagcacaa tgaagattaa gatcattgct cctcctgaac gcaagtactc agtctggatt
     1141 ggcggctcca tcctggcctc actgtccacc ttccagcaga tgtggatcag caagcaggag
     1201 tatgatgagt caggcccctc cattgtccac cgcaaatgct tctagatgga ctgagcaggt
     1261 gccaggcatc tgctgcatga gctgattctg aagtatcgat ttgccctggc aaatgtacac
     1321 acctcatgct agcctcgtga aactggaata agcctttgaa aagaaatttg tccttgaagc
     1381 ctgtatctga tatcagcact ggatcgtaga acttgttgcc gatttttgac cttgtattca
     1441 agttaactgt tcccttggta tatgtttaat accctgtgca tatcttgatt tagtccttag
     1501 ttcatgtggc tcggtcactt ggtggctggg gagatctgtg gaaaagtcag tcagtcccca
     1561 gcctagtgga tctctgtgag caccatgtag tgatctgtgc agggtattaa ccaacagcag
     1621 acttccagga tttcccgagg ctggcaaggg ttcctgaact agttaccact tcttttcttg
     1681 ccagtctaac agggtgggaa agtccgagcc ttaggaccca gtttctgttc tggttttttc
     1741 cctcctgacc gccatgggtt gttacttgcc ttgagttggg aacgtttgca ttgacacctg
     1801 taaatgtatt catcctttta atttatgtaa ggtttttgta ctcaattctt taagaaatga
     1861 caaattttgg ttttctactg ttcagtgaga acattaggcc ccagcaacac gtcattgtgt
     1921 aaagagaaat aaaagtgctg cagtaa
//
