LOCUS       NM_001037369            1666 bp    mRNA    linear   ROD 19-NOV-2024
DEFINITION  Rattus norvegicus popeye domain cAMP effector 3 (Popdc3),
            transcript variant 2, mRNA.
ACCESSION   NM_001037369
VERSION     NM_001037369.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Froese,A., Breher,S.S., Waldeyer,C., Schindler,R.F., Nikolaev,V.O.,
            Rinne,S., Wischmeyer,E., Schlueter,J., Becher,J., Simrick,S.,
            Vauti,F., Kuhtz,J., Meister,P., Kreissl,S., Torlopp,A.,
            Liebig,S.K., Laakmann,S., Muller,T.D., Neumann,J., Stieber,J.,
            Ludwig,A., Maier,S.K., Decher,N., Arnold,H.H., Kirchhof,P.,
            Fabritz,L. and Brand,T.
  TITLE     Popeye domain containing proteins are essential for stress-mediated
            modulation of cardiac pacemaking in mice
  JOURNAL   J Clin Invest 122 (3), 1119-1130 (2012)
   PUBMED   22354168
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Parnes,D., Jacoby,V., Sharabi,A., Schlesinger,H., Brand,T. and
            Kessler-Icekson,G.
  TITLE     The Popdc gene family in the rat: molecular cloning,
            characterization and expression analysis in the heart and cultured
            cardiomyocytes
  JOURNAL   Biochim Biophys Acta 1769 (9-10), 586-592 (2007)
   PUBMED   17662479
REFERENCE   3  (bases 1 to 1666)
  AUTHORS   Andree,B., Hillemann,T., Kessler-Icekson,G., Schmitt-John,T.,
            Jockusch,H., Arnold,H.H. and Brand,T.
  TITLE     Isolation and characterization of the novel popeye gene family
            expressed in skeletal muscle and heart
  JOURNAL   Dev Biol 223 (2), 371-382 (2000)
   PUBMED   10882522
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000020.1.
            
            On Dec 22, 2022 this sequence version replaced NM_001037369.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC105761.1, FQ218039.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760475
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-216               JAXUCZ010000020.1  50354775-50354990
            217-564             JAXUCZ010000020.1  50379255-50379602
            565-776             JAXUCZ010000020.1  50379762-50379973
            777-885             JAXUCZ010000020.1  50381111-50381219
            886-1666            JAXUCZ010000020.1  50382270-50383050
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20q13"
     gene            1..1666
                     /gene="Popdc3"
                     /note="popeye domain cAMP effector 3"
                     /db_xref="GeneID:641520"
                     /db_xref="RGD:1590760"
     exon            1..216
                     /gene="Popdc3"
                     /inference="alignment:Splign:2.1.0"
     exon            217..564
                     /gene="Popdc3"
                     /inference="alignment:Splign:2.1.0"
     CDS             451..1167
                     /gene="Popdc3"
                     /note="isoform 2 is encoded by transcript variant 2;
                     popeye domain-containing protein 3; popeye domain
                     containing 3"
                     /codon_start=1
                     /product="popeye domain-containing protein 3 isoform 2"
                     /protein_id="NP_001032446.1"
                     /db_xref="GeneID:641520"
                     /db_xref="RGD:1590760"
                     /translation="MEKNSSLWKSLVTEHPLCTTWKQEAEGAIFHLASILFVFVHIAY
                     QVHSITFAREFHVLYSSLFKPLGIPLPVFRTIALSSEVVTLEKEHCYAMQGKTSIDRL
                     SVLVSGRIRVTVDGEFLHYISPFQFLDSPEWDSLRPTEEGIFQVTLTADTDCRYVSWR
                     RKKLYLLFAQHRYISRLFSVLIGSDIADKLYALNDRVYIGKKHHYDIRLPNYYQLSSP
                     DLSRSPLTEQFRNSRQHCNK"
     exon            565..776
                     /gene="Popdc3"
                     /inference="alignment:Splign:2.1.0"
     exon            777..885
                     /gene="Popdc3"
                     /inference="alignment:Splign:2.1.0"
     exon            886..1666
                     /gene="Popdc3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgagcccgt ccccgccgca gggagcggct ccgatccgct gtgcccgtct cgggcgggcg
       61 cgagaggacg catcccgaat ccccgcgcgt gcaggcgggt agcggggcga gcgtgtttcg
      121 gtccgtgggt ttcgggctac tagagccgcc cgccccccgc gcactcggcc ggaaagttct
      181 ttgtgctcca tcgggatagg cgtgagggcc gggaaggaaa tagcaaaatc tttatggact
      241 tcgtctgggt caggagccca gatgagctta aagaaaccgg ggctgaaccc ttagtttttc
      301 gtctccacgc ccactgaacc cctccatgcc ggctcccaca tctcccggcc tgtggagcga
      361 ttgccccgtt ctgtgatggg aaagcgaagg actccgtcat cgctggcctc agagtcatct
      421 aaagagaact gacagggaag cggtgcagcc atggagaaga attcaagctt gtggaagagc
      481 ctggtgacgg agcacccact ctgcaccacc tggaagcaag aggcggaagg ggccattttc
      541 cacctcgcca gtatcttgtt tgtgttcgtt cacatcgcgt accaggttca cagcatcacc
      601 ttcgcccgag aattccacgt gctgtatagc tccctcttca agcccctcgg gatccctttg
      661 cccgtcttca gaacaattgc cctgagctcc gaagtggtta ctctggaaaa ggagcactgt
      721 tacgccatgc aggggaagac ctccattgat agactctccg tgctggtctc aggaaggatc
      781 agagtgaccg tcgatggcga atttctgcac tatatttccc cctttcagtt cctggattct
      841 cccgagtggg attcgctaag acccacagag gaaggcattt ttcaggtcac tctcacagca
      901 gacactgact gtcgatacgt gtcctggagg agaaaaaaat tgtatctgct ctttgctcag
      961 catcgataca tctcccgcct gttttctgtt ttaatcggca gtgacattgc agataaactc
     1021 tatgccttga acgacagagt atacataggg aagaaacatc actatgatat ccggttaccc
     1081 aactactatc agctgtcaag tccagacttg tccagatcac ccctaacaga acagtttcgg
     1141 aattccagac aacattgtaa caaatgacat caaaacctga agttgttttg atggctggga
     1201 aaaaaaaaaa gacttcatca ttccccagat aagatagcac actattattc tattttacaa
     1261 ctgaaactca gagtcaagat gccatcgcca ggtgtttatt aattcatttt aacttccgca
     1321 cctcaaataa actttacaaa cgttcatgta ttccttgctg ttgtaatgga agatgaataa
     1381 tgacgggcgc tctgcccctt ctctgcatca gaactgagag aataatttcg tattctctga
     1441 tatttcctcc aacatgctgt ctgatactgt tggcacagga gaagccctta gcaaatgtca
     1501 gcaggagagc aggttgctat ggtccacaga cccatttcta gaatctgcct tttcctgaca
     1561 atctctgatg aatgtaagtt acactgttgc tgtaggaagc agttcctttt atatgtgaca
     1621 ttctctgaca tgacttagaa agaagaataa atgtaagaaa cagtaa
//
