LOCUS       NM_001105752            1439 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus POP5 homolog, ribonuclease P/MRP subunit (Pop5),
            mRNA.
ACCESSION   NM_001105752 XM_001077549 XM_213794
VERSION     NM_001105752.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1439)
  AUTHORS   Wu,J., Niu,S., Tan,M., Huang,C., Li,M., Song,Y., Wang,Q., Chen,J.,
            Shi,S., Lan,P. and Lei,M.
  TITLE     Cryo-EM Structure of the Human Ribonuclease P Holoenzyme
  JOURNAL   Cell 175 (5), 1393-1404 (2018)
   PUBMED   30454648
REFERENCE   2  (bases 1 to 1439)
  AUTHORS   Welting,T.J., Kikkert,B.J., van Venrooij,W.J. and Pruijn,G.J.
  TITLE     Differential association of protein subunits with the human RNase
            MRP and RNase P complexes
  JOURNAL   RNA 12 (7), 1373-1382 (2006)
   PUBMED   16723659
REFERENCE   3  (bases 1 to 1439)
  AUTHORS   van Eenennaam,H., Lugtenberg,D., Vogelzangs,J.H., van Venrooij,W.J.
            and Pruijn,G.J.
  TITLE     hPop5, a protein subunit of the human RNase MRP and RNase P
            endoribonucleases
  JOURNAL   J Biol Chem 276 (34), 31635-31641 (2001)
   PUBMED   11413139
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Aug 2, 2012 this sequence version replaced NM_001105752.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ212758.1, SRR26643288.48130.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760434,
                                           SAMN12840107 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-452               JAXUCZ010000012.1  47041581-47042032   c
            453-699             JAXUCZ010000012.1  47039588-47039834   c
            700-842             JAXUCZ010000012.1  47039373-47039515   c
            843-992             JAXUCZ010000012.1  47038146-47038295   c
            993-1076            JAXUCZ010000012.1  47037894-47037977   c
            1077-1439           JAXUCZ010000012.1  47037451-47037813   c
FEATURES             Location/Qualifiers
     source          1..1439
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..1439
                     /gene="Pop5"
                     /gene_synonym="Rnasep3; rpP2"
                     /note="POP5 homolog, ribonuclease P/MRP subunit"
                     /db_xref="GeneID:117241"
                     /db_xref="RGD:1311819"
     exon            1..452
                     /gene="Pop5"
                     /gene_synonym="Rnasep3; rpP2"
                     /inference="alignment:Splign:2.1.0"
     exon            453..699
                     /gene="Pop5"
                     /gene_synonym="Rnasep3; rpP2"
                     /inference="alignment:Splign:2.1.0"
     CDS             680..1189
                     /gene="Pop5"
                     /gene_synonym="Rnasep3; rpP2"
                     /EC_number="3.1.26.5"
                     /note="processing of precursor 5, ribonuclease P/MRP
                     family; ribonuclease P protein 3; processing of precursor
                     5, ribonuclease P/MRP subunit"
                     /codon_start=1
                     /product="ribonuclease P/MRP protein subunit POP5"
                     /protein_id="NP_001099222.2"
                     /db_xref="GeneID:117241"
                     /db_xref="RGD:1311819"
                     /translation="MVRFKHRYLLCELVSEDPRCRLSLDDRVLGGLVRDTIARVHGAF
                     GAAACSVGFAVRYLNAYTGVVLLRCRKDFYQLVWSALPFITCLENKGHRYSCFFNTLH
                     VGGTIRTCQKFLIQYNRRQLLVLLQNYTDEGEREAIKKSVSRSCLLDRESVEELSDSA
                     GEEAAEAME"
     exon            700..842
                     /gene="Pop5"
                     /gene_synonym="Rnasep3; rpP2"
                     /inference="alignment:Splign:2.1.0"
     exon            843..992
                     /gene="Pop5"
                     /gene_synonym="Rnasep3; rpP2"
                     /inference="alignment:Splign:2.1.0"
     exon            993..1076
                     /gene="Pop5"
                     /gene_synonym="Rnasep3; rpP2"
                     /inference="alignment:Splign:2.1.0"
     exon            1077..1439
                     /gene="Pop5"
                     /gene_synonym="Rnasep3; rpP2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctctaagc ctcagcccct tcctccgcct gacgccggcc cacggctccc gcccccgcgc
       61 ggcggggacc cgggtgattg caaacagccg ccggcctcat taggagacct gtaattagag
      121 gctggcggag ccgagggcgg gggctaatta ccaccgggag aggctgagcc gccgccggcc
      181 cactgggagg cgtctggccc gcaccgaccg gctgccccgg atccgggtgc ttcctctggg
      241 tggcggccac tcgccgccgt ttgtttacta ggccctcacc tcgcccgccc gtgccaatgc
      301 aattccacct acaccaccat cctaataatt cctaataatc ggaactaaaa gggaaagctg
      361 agctctagag acgcggtgtc gtccctgaca gcaccggacc agagtacagg acaggagatc
      421 tgaacccacg gctgtggcta cgttactcca aggtcccaat tcccgtgaca ctctcgggct
      481 ttaagtgcaa ggatgtccgc aaacgttcac tggacgaccc aaagtacaca cagaacttga
      541 gcgcaaaatc cccagcgcct gcctgaggcg ggcgcatgcg ctcttacgct cgccgcgaga
      601 ggcggagcgt ggagattgac agggctctcg gcctgttgga gcctagtccc gccctcctcc
      661 cgcatccggc gcggacgcca tggtgcggtt caagcacagg taccttctgt gcgagctggt
      721 gtccgaggac ccgcgctgcc gcctgagcct ggacgaccgc gtgctgggcg ggctcgtccg
      781 ggacacgatc gcccgggtgc acggggcctt cggcgccgcc gcctgctccg tgggctttgc
      841 agttagatac ctcaatgctt acactggagt agtgctgctt cgatgccgaa aggatttcta
      901 ccagctcgtg tggtcagctc ttcctttcat cacgtgtttg gagaacaaag gacaccgtta
      961 ctcgtgcttc ttcaacacat tacatgtggg aggtaccatt agaacctgtc agaagttcct
     1021 gattcagtac aacaggagac agctgttggt cttgttgcag aactacaccg atgaaggaga
     1081 gcgggaagcc attaagaagt ctgtctcaag aagctgtctg ctggacagag agtcggttga
     1141 agagctttcg gacagtgctg gggaggaggc tgcagaggca atggagtgac caggctcact
     1201 ggtggaacac agtcacagga ggtggcagca gcaggccacg gttctccagt gcagtgactg
     1261 acaaccggag cacaggtgac cagcttgaag ttgaggcctc gctgccttac cttccaccca
     1321 tggttgtaaa ggctctgcgc agacattttg taggtagttg cttagctcct gggtggaata
     1381 aacactcttg gcttccaggg caacattctt aaacctcaaa tgcttccaca gtcgacagt
//
