LOCUS       NM_001106244             799 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus RNA polymerase II subunit I (Polr2i), mRNA.
ACCESSION   NM_001106244 XM_001075773 XM_214895
VERSION     NM_001106244.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Kershnar,E., Wu,S.Y. and Chiang,C.M.
  TITLE     Immunoaffinity purification and functional characterization of
            human transcription factor IIH and RNA polymerase II from clonal
            cell lines that conditionally express epitope-tagged subunits of
            the multiprotein complexes
  JOURNAL   J Biol Chem 273 (51), 34444-34453 (1998)
   PUBMED   9852112
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_214895.4, XM_001075773.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM052786.1, FM058925.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..799
                     /gene="Polr2i"
                     /note="RNA polymerase II subunit I"
                     /db_xref="GeneID:292778"
                     /db_xref="RGD:1309395"
     exon            1..437
                     /gene="Polr2i"
                     /inference="alignment:Splign:2.1.0"
     CDS             379..756
                     /gene="Polr2i"
                     /EC_number="2.7.7.6"
                     /note="polymerase (RNA) II (DNA directed) polypeptide I,
                     14.5kDa; polymerase (RNA) II subunit I"
                     /codon_start=1
                     /product="DNA-directed RNA polymerase II subunit RPB9"
                     /protein_id="NP_001099714.1"
                     /db_xref="GeneID:292778"
                     /db_xref="RGD:1309395"
                     /translation="MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDY
                     QQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSA
                     RAEDAMRLYYVCTAPHCGHRWTE"
     exon            438..492
                     /gene="Polr2i"
                     /inference="alignment:Splign:2.1.0"
     exon            493..566
                     /gene="Polr2i"
                     /inference="alignment:Splign:2.1.0"
     exon            567..641
                     /gene="Polr2i"
                     /inference="alignment:Splign:2.1.0"
     exon            642..693
                     /gene="Polr2i"
                     /inference="alignment:Splign:2.1.0"
     exon            694..799
                     /gene="Polr2i"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaggccgac gccggggaga atggctggag ttatcctggc ccgccgagta taagctcggc
       61 gcatgtgcac tggccttggg ccaagaagag agcggtggct tctcccgttt atgctcagcg
      121 ccttgtggat gacgttgcgc gtcacagtcc cagcccttgt cctaaatcca aaccactcgg
      181 agttgtgaag caaggttccg aaataatcgg gagtaggtat caaaggatag acgcaagccg
      241 tcagccagac atccataaga taaggagccc tcacgtgcac gcagctccgc cccattttag
      301 tgcagctacg cgatccgacc cttcccgcgg tccgtagcgc ggccgcgcaa gcgcagaaag
      361 gtaatcagcc cagtcgctat ggaacctgac gggacgtacg agcctggctt cgtcggtatt
      421 cggttctgcc aggaatgtaa taacatgctg taccccaagg aggacaagga gaatcgcatt
      481 ctgctgtacg cgtgccggaa ttgcgattac cagcaggaag ccgacaacag ctgcatctac
      541 gtcaacaaaa tcacgcacga agtggacgag ctgacccaga tcatcgcaga cgtgtcccag
      601 gaccctacgt tgccccggac cgaggaccac ccgtgccaga agtgtggcca caaggaggca
      661 gtgttcttcc agtcacacag tgcccgagct gaggatgcca tgcgcctgta ctatgtatgc
      721 accgccccac actgcggcca ccgctggact gagtgaccgt tccttcctcc atttgtaata
      781 aatgcccagt ttccacact
//
