LOCUS       NM_053948                863 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus RNA polymerase II subunit G (Polr2g), mRNA.
ACCESSION   NM_053948
VERSION     NM_053948.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 863)
  AUTHORS   Knutson,B.A. and Hahn,S.
  TITLE     TFIIB-related factors in RNA polymerase I transcription
  JOURNAL   Biochim Biophys Acta 1829 (3-4), 265-273 (2013)
   PUBMED   22960599
  REMARK    Review article
REFERENCE   2  (bases 1 to 863)
  AUTHORS   Khalyfa,A., Chlon,T., Qiang,H., Agarwal,N. and Cooper,N.G.
  TITLE     Microarray reveals complement components are regulated in the
            serum-deprived rat retinal ganglion cell line
  JOURNAL   Mol Vis 13, 293-308 (2007)
   PUBMED   17356516
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 863)
  AUTHORS   Kershnar,E., Wu,S.Y. and Chiang,C.M.
  TITLE     Immunoaffinity purification and functional characterization of
            human transcription factor IIH and RNA polymerase II from clonal
            cell lines that conditionally express epitope-tagged subunits of
            the multiprotein complexes
  JOURNAL   J Biol Chem 273 (51), 34444-34453 (1998)
   PUBMED   9852112
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from Z71925.1.
            
            On Aug 30, 2012 this sequence version replaced NM_053948.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: Z71925.1, FQ224086.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-863               Z71925.1           2-864
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="W"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..863
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /note="RNA polymerase II subunit G"
                     /db_xref="GeneID:117017"
                     /db_xref="RGD:621284"
     exon            1..86
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..593
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /EC_number="2.7.7.6"
                     /note="RNA polymerase II subunit B7; DNA-directed RNA
                     polymerase II subunit G; polymerase (RNA) II (DNA
                     directed) polypeptide G; polymerase (RNA) II subunit G"
                     /codon_start=1
                     /product="DNA-directed RNA polymerase II subunit RPB7"
                     /protein_id="NP_446400.1"
                     /db_xref="GeneID:117017"
                     /db_xref="RGD:621284"
                     /translation="MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGF
                     VIAVTTIDNIGAGVIQPGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIG
                     PMSCFISRHSIPSEMEFDPNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAI
                     GSLMDDYLGLVS"
     exon            87..196
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /inference="alignment:Splign:2.1.0"
     exon            197..356
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /inference="alignment:Splign:2.1.0"
     exon            357..407
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /inference="alignment:Splign:2.1.0"
     exon            408..473
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /inference="alignment:Splign:2.1.0"
     exon            474..545
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /inference="alignment:Splign:2.1.0"
     exon            546..579
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /inference="alignment:Splign:2.1.0"
     exon            580..863
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      863
                     /gene="Polr2g"
                     /gene_synonym="Rpb7"
ORIGIN      
        1 gacttctgct agtgcttccg gcgaggtccc ttcctgggga gttctggcct ctgcggtcca
       61 agcttctgca gaagatgttt tatcatattt ccctggagca cgagatccta ctgcacccac
      121 gctactttgg tcccaacttg ctcaacacgg tgaagcagaa gctgttcacc gaggtggagg
      181 ggacctgcac tgggaaatat ggctttgtga ttgctgtcac taccatcgac aatattggtg
      241 ctggtgtgat ccagccgggc cgaggttttg ttctttatcc agtgaaatac aaagctattg
      301 ttttccggcc ctttaaaggg gaagtggtgg atgctgtggt cactcaggtc aacaaggttg
      361 gacttttcac agaaattggg cccatgtcct gcttcatctc tcgacactcc atcccttcag
      421 agatggagtt tgatccaaat tcgaaccccc cttgttacaa gaccatggat gaggacattg
      481 taattcagca ggacgatgag atacgcttga agattgtagg gacacgtgta gacaagaatg
      541 acatttttgc tattggctct ctgatggatg actacttggg acttgtgagc tgagtgaggg
      601 agcctccagc ttgctttgat cctgatttag aaagtgtgac tttccaactt gaactcagca
      661 ccaacttgac tgtcgtacca gaggttcaat ctggccactg ttatgggggc agggaagaag
      721 gctccttgtc cccagaacac tttgtttctt ccagctgagc tgtgctctta ttctcttctg
      781 tgttctaacc ataaacatgt tgtccttagt tctcaaggaa atgtgtcttc tcttggtagg
      841 aataaaagtt gtttatttat ttt
//
