LOCUS       NM_001008330            1320 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus RNA polymerase I and III subunit C (Polr1c),
            mRNA.
ACCESSION   NM_001008330 XM_217347
VERSION     NM_001008330.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Renaud M, Praz V, Vieu E, Florens L, Washburn MP, l'Hote P and
            Hernandez N.
  TITLE     Gene duplication and neofunctionalization: POLR3G and POLR3GL
  JOURNAL   Genome Res 24 (1), 37-51 (2014)
   PUBMED   24107381
REFERENCE   2  (bases 1 to 1320)
  AUTHORS   Vannini A and Cramer P.
  TITLE     Conservation between the RNA polymerase I, II, and III
            transcription initiation machineries
  JOURNAL   Mol Cell 45 (4), 439-446 (2012)
   PUBMED   22365827
  REMARK    Review article
REFERENCE   3  (bases 1 to 1320)
  AUTHORS   Schneider DA.
  TITLE     RNA polymerase I activity is regulated at multiple steps in the
            transcription cycle: recent insights into factors that influence
            transcription elongation
  JOURNAL   Gene 493 (2), 176-184 (2012)
   PUBMED   21893173
  REMARK    Review article
REFERENCE   4  (bases 1 to 1320)
  AUTHORS   Dumay-Odelot H, Durrieu-Gaillard S, Da Silva D, Roeder RG and
            Teichmann M.
  TITLE     Cell growth- and differentiation-dependent regulation of RNA
            polymerase III transcription
  JOURNAL   Cell Cycle 9 (18), 3687-3699 (2010)
   PUBMED   20890107
  REMARK    Review article
REFERENCE   5  (bases 1 to 1320)
  AUTHORS   Hu P, Wu S, Sun Y, Yuan CC, Kobayashi R, Myers MP and Hernandez N.
  TITLE     Characterization of human RNA polymerase III identifies orthologues
            for Saccharomyces cerevisiae RNA polymerase III subunits
  JOURNAL   Mol Cell Biol 22 (22), 8044-8055 (2002)
   PUBMED   12391170
REFERENCE   6  (bases 1 to 1320)
  AUTHORS   Song CZ, Hanada K, Yano K, Maeda Y, Yamamoto K and Muramatsu M.
  TITLE     High conservation of subunit composition of RNA polymerase I(A)
            between yeast and mouse and the molecular cloning of mouse RNA
            polymerase I 40-kDa subunit RPA40
  JOURNAL   J Biol Chem 269 (43), 26976-26981 (1994)
   PUBMED   7929437
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC086597.1.
            
            On Dec 16, 2004 this sequence version replaced XM_217347.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086597.1, SRR8487227.70023.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q12"
     gene            1..1320
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /note="RNA polymerase I and III subunit C"
                     /db_xref="GeneID:301246"
                     /db_xref="RGD:1309689"
     exon            1..125
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /inference="alignment:Splign:2.1.0"
     CDS             57..1097
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /note="RNA polymerase 1-1; polymerase (RNA) I polypeptide
                     C; polymerase (RNA) I subunit C; RNA polymerase I subunit
                     C"
                     /codon_start=1
                     /product="DNA-directed RNA polymerases I and III subunit
                     RPAC1"
                     /protein_id="NP_001008331.1"
                     /db_xref="GeneID:301246"
                     /db_xref="RGD:1309689"
                     /translation="MAAAQAVEEMRTRVVLGEFGVRNVHTTDFPGNYSGYDDAWDQDR
                     FEKNFRVDVVHMDESTLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQ
                     DEILAHRLGLIPILADPRLFEYRNPGEEEGTEIDTLQFRLQVRCTRNPSAAKDSSDPN
                     ELYVNHKVYTRHMTWVPLGNQADVFPEGTVRPVHDDILIAQLRPGQEIDLMMHCVKGI
                     GKDHAKFSPVATASYRLLPDITLLEPVEGEAAEELSQCFSPGVIAVQEVQGKKVARVA
                     NARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIKILMGKCR
                     RFLDELDAVEMD"
     exon            126..197
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /inference="alignment:Splign:2.1.0"
     exon            198..305
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /inference="alignment:Splign:2.1.0"
     exon            306..438
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /inference="alignment:Splign:2.1.0"
     exon            439..558
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /inference="alignment:Splign:2.1.0"
     exon            559..711
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /inference="alignment:Splign:2.1.0"
     exon            712..861
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /inference="alignment:Splign:2.1.0"
     exon            862..978
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /inference="alignment:Splign:2.1.0"
     exon            979..1290
                     /gene="Polr1c"
                     /gene_synonym="Ac2-127; Rpo1-1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccgctagc acgcacgcgc taacttggag cctcctctca cggctgatgg tggaagatgg
       61 cggctgctca ggcggtggag gaaatgcgga ctcgcgtggt tctgggagag tttggggttc
      121 gcaatgtcca caccactgac tttcccggta actactccgg ttatgatgat gcctgggacc
      181 aggaccggtt cgagaagaac ttccgtgtgg acgtggtgca tatggacgag agcacactgg
      241 agttcgacat ggtggggatt gatgctgcca ttgccaatgc cttccggagg attctgttag
      301 ctgaggtgcc aacaatggct gtggaaaagg ttttggtgta taacaacaca tccatcgtcc
      361 aggatgagat ccttgctcac cgcctggggc ttatccccat tcttgctgat ccacgtctct
      421 ttgaatatcg gaacccagga gaggaggagg gaacagagat agatacacta cagtttcggc
      481 tgcaggtcag gtgtaccagg aaccccagtg ctgctaagga ttcttccgac cccaatgaac
      541 tctatgtgaa ccacaaagtt tataccaggc acatgacgtg ggtgcccttg ggaaaccagg
      601 ctgatgtctt cccggagggc acggttcgcc ctgtgcatga cgacatcctc attgcccagc
      661 ttcggcccgg ccaggagatt gacctgatga tgcactgcgt caagggcatc ggcaaagacc
      721 atgccaagtt ctcaccggtg gccacagcca gctacaggct cctgccggac atcaccctgc
      781 ttgaacctgt agaaggggaa gcagccgagg agctgagcca gtgcttctca cccggcgtga
      841 ttgcggtgca ggaagtacaa ggtaaaaagg tggccagggt tgccaatgct cggctggata
      901 ccttcagcag ggagatcttc cgtcatgaga agctcaagaa ggccgtgcgg cttgcccgtg
      961 ttcgggacca ttacatcttt tctgtggagt caactggggt tttgccacca gatgtgttgg
     1021 tgagtgaagc tatcaagatc ctgatgggga agtgccggcg gttcttggat gaactagatg
     1081 cagttgagat ggactgaggc ttccacagta cttctggaag ggcttggctg ctcttggagt
     1141 ttgacctttt cccaactgct ccgctatgcc cggtgttaac tggaggtctg atttcagtct
     1201 catttctagt tactacattt tattaaatgt gccacagact aagatgcctt tgtaaggcct
     1261 ttgctgtaaa taaattggtc ttaaaagttt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
