LOCUS       XM_039111985            2352 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus DNA polymerase epsilon 2, accessory
            subunit (Pole2), transcript variant X4, mRNA.
ACCESSION   XM_039111985
VERSION     XM_039111985.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2352
                     /gene="Pole2"
                     /note="DNA polymerase epsilon 2, accessory subunit;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 6 ESTs, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     4 samples with support for all annotated introns"
                     /db_xref="GeneID:299112"
                     /db_xref="RGD:1311962"
     CDS             862..2265
                     /gene="Pole2"
                     /codon_start=1
                     /product="DNA polymerase epsilon subunit 2 isoform X3"
                     /protein_id="XP_038967913.1"
                     /db_xref="GeneID:299112"
                     /db_xref="RGD:1311962"
                     /translation="MIERSVVEAAVQECSQSVDETIEHIFNIIGAFDIPHFIYNSERK
                     KFLPLSMTNHAAPTIFGTARDKAELYRERYTILHQRTHRHELFTPPVIGSHPDESGSK
                     FQLKTIETLLGSTSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTE
                     ACFVLAEGCFEDQVFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKASAKLRQL
                     EEENKDAMFVIVSDVWLDQVQVLEKLHVMFSGYSPAPPTCFILCGNFSSAPYGKNQVQ
                     ALKDSLKSLADIICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVP
                     FSVFTTNPCRIQYCTQEIIIFREDLVNKMCRNCVRFPSSSLDIPTHFVKTVLSQGHLA
                     PLPLYVSPVYWAYDYTLRVYPVPDLLVIADKYDPFTVTNTECLCINPGSFPRSGFAFK
                     VFYPSSKTVEDSKLQGF"
ORIGIN      
        1 cggaaccgag aaacctgcgc gtctgcgcgg ccgcagcctg ggacccgggt ctgctggctc
       61 ccggagaaca ccggcgctcc gaagattcac tgagctccct ccctgaagcc tctctgcagc
      121 cactgactgg acatcttagt tagagttgat ggaaactgcc accagatctc tgggcacaga
      181 aaacagcatc tgaatacaca gtgcacaaaa ccatccccca acaagcttcc ttcttccgtg
      241 tataggcttc tagcaggaag tatggcccag attaaagatg tgtcttctca cctcaaaatc
      301 tgaatcaaag cccctgtagt aggcggaagt atcattggag ctgttgtcct cagccctgct
      361 ctgcacacca gtgttcgtga aatgagtgcc ctatcactgt caatgctctg agcatgtctc
      421 tacacaccct tgagttagat gagacctttg atgatgatca tcagccttgc ctgatgttta
      481 tttcctggaa atacttgcaa gaggtgtgca gcagtccaca gatatcaccg tttgagcttc
      541 tggcaacttc taacatggtc accgaggtca tggggcacac ctatttagcc tgatcaaaac
      601 ttctcaagcc tttctgtccc agctccacag gtgccctccc ccctttatca agttactaaa
      661 aggatgggta acctgggtga agtggaaaat aaaatcatat caatggctta ggagctctgc
      721 aaatgtctgc acctgtttta cggtcacagt gaagccacta agtatctcac tgaagctctc
      781 cagtctgtca ctgaattgga gctcgaggag aacctagaaa agatcattga tgcagttgaa
      841 aagcagccct tgtcatcaaa catgatcgaa cgatctgtag tggaagcagc tgtccaggag
      901 tgcagtcagt ctgttgatga gactatagaa catattttca atatcattgg agcttttgat
      961 attccacatt ttatatataa ttcagaaaga aaaaagtttc ttcctctatc aatgactaac
     1021 catgctgcac caaccatatt tggaacagca agggacaaag ccgagctgta ccgtgaacga
     1081 tacaccattt tacaccagag gacgcacaga catgaattgt tcactcctcc agtgataggc
     1141 tcacaccccg acgaaagtgg aagcaaattc cagcttaaaa caatagaaac tttgctgggt
     1201 agtacgagta aagttggtga cgtgattgtc cttggaatga taacccagtt gaaagagggg
     1261 aagtttttcc tggaagaccc tactggaact gtacagctgg accttagtaa agctcagttc
     1321 cacagtggcc tatacactga ggcatgcttt gtgctggccg aaggttgctt tgaagatcaa
     1381 gtgtttcatg ccaatgcctt tggatttcct cccacggagc cctctagcac cacaagggca
     1441 tactatggaa atattaattt ttttggaggg ccttctaatg cgtcagtgaa ggcttctgca
     1501 aaactgagac agctggaaga ggagaacaag gacgccatgt ttgtgattgt gtccgacgtt
     1561 tggttggatc aagtgcaagt gctggagaag cttcacgtaa tgttttctgg ttattcccct
     1621 gcacctccga cctgctttat actgtgcggt aacttttcat ctgcaccata tggaaaaaat
     1681 caagtccagg ctttgaaaga ttccctaaaa tctttggcag acataatatg tgaataccca
     1741 agtatccacc aaagtagccg ttttgtgttt gtgcctggcc cggaggatcc tggatttggt
     1801 tctattttac caaggccgcc ccttgctgaa agcatcacac aagaattcag acaaagggtc
     1861 ccattttctg ttttcactac taacccttgc agaattcagt attgtacaca agaaataatt
     1921 atcttccgtg aagacttagt gaataaaatg tgtagaaact gtgtccgctt tcctagcagc
     1981 agtttggata ttcctaccca tttcgtaaag actgtcttat ctcagggaca tctggctcct
     2041 ctccctcttt acgtgtcccc cgtctactgg gcatatgact acactttgag agtgtaccca
     2101 gtgcccgatc tgctggtcat tgcagacaag tacgatccgt tcaccgtgac caacaccgag
     2161 tgcctctgca taaaccctgg ctcctttcca agaagtggat ttgcatttaa agttttttac
     2221 ccttccagta agacagtaga agacagcaaa cttcagggct tttgagactt atgagactac
     2281 gtgaatgaac tttcttattt ttatcttatg tattttgtaa attaaattgt aataaaccta
     2341 tggtaaacct ta
//
