LOCUS       NM_001025647            2329 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus POC5 centriolar protein (Poc5), mRNA.
ACCESSION   NM_001025647 XM_215452
VERSION     NM_001025647.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Suzuki,H., Fukunishi,Y., Kagawa,I., Saito,R., Oda,H., Endo,T.,
            Kondo,S., Bono,H., Okazaki,Y. and Hayashizaki,Y.
  TITLE     Protein-protein interaction panel using mouse full-length cDNAs
  JOURNAL   Genome Res 11 (10), 1758-1765 (2001)
   PUBMED   11591653
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC097489.1.
            
            On Jul 22, 2005 this sequence version replaced XM_215452.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097489.1, SRR8487230.122879.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132263, SAMD00132265
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q12"
     gene            1..2329
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /note="POC5 centriolar protein"
                     /db_xref="GeneID:294667"
                     /db_xref="RGD:1310597"
     exon            1..210
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            211..370
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            371..460
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     CDS             383..2059
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /note="protein of centriole 5; proteome of centriole 5;
                     POC5 centriolar protein homolog"
                     /codon_start=1
                     /product="centrosomal protein POC5"
                     /protein_id="NP_001020818.1"
                     /db_xref="GeneID:294667"
                     /db_xref="RGD:1310597"
                     /translation="MSSDEDKCSLHVAHNDSDRSVSTDLQEEYEELLRYAVVNPNVES
                     GVSRPSHLRGEAVPDRFPVLGSNPLRETALEVGKGSDLNISSLSKSGSPRKPPHPVMD
                     FFGPHFLGDSSSPASISTRTDAHEIIVGDHLVSEENFQKLENVLDIWSSGLKTNILSE
                     LSKWRLNFIDWHRMEMKKEREKHAVTVKQLSSQIADLKELQKAFEISIGRKDEVISSL
                     SRAIGKQKERIELMKSFFRWRIGHVKSRQESYEGKLADQYFERTLLKKVWKGWRSVVQ
                     RQWKDVVERACQARAEEVCVQISNDYEAKLAMLSLALENAKAEIQRMHQEKDHFEDSM
                     KKAFMRGVCALNLEAMTIFQNKNDAGIDFTNNKKEESGPGGPGREPSAHLDTSSSTMP
                     SAVPLQLLPSATLAAGVASATAIPSTASLTSAGATSASSGHVPISVLSAGSAATAAPE
                     DTFAPRVVTAAQQKAGKTITARITGRCDFGSKTRINSSLAIMGVSPPMSSVVVEKHHP
                     VTVQTIPQATAAKYPRAIHPESGFPASRSVGARPAHAQSLSNVQSIKVVD"
     exon            461..575
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            576..653
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            654..844
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            845..1021
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            1022..1126
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            1127..1306
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            1307..1460
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            1461..1738
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            1739..1915
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
     exon            1916..2304
                     /gene="Poc5"
                     /gene_synonym="RGD1310597"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctagtttgaa actgtcaagt ggctgctagg gaagccgctg tgcttgcagt ggttgtggcg
       61 gtgacgccgg ctgtcgcggc gagtcgggag tcgaagtttg gcggagacgg tgactaccgg
      121 tggcgggacc caggccggtt cctaccagtc agttttgggg gcattgtccc tggaggtgcc
      181 cagaaagagg acacaagtga tgcaaactaa ttgaatgcat ccatggccga gggaccggga
      241 catactgagg gctgactgct gtgtgcccac agctgttccc agtgcttcaa agtcaacctc
      301 atgctcacac agctggcact gaactcgccg accttcctcc cagtctcact ggcccacagt
      361 ccttgcttcg tatttgtaca gaatgtcgtc tgatgaggac aagtgttcac ttcatgttgc
      421 tcacaatgac tctgatcgtt cagtctccac agaccttcag gaggaatatg aagaactgct
      481 tcgctatgct gttgtgaacc caaatgttga gtctggtgtt tcacggccgt ctcaccttag
      541 aggagaagcg gtaccggaca gatttcctgt gctaggaagt aaccctttaa gagaaactgc
      601 actggaagtt ggaaaaggat ctgatttaaa tatttcaagc ctttcaaaat cagggtcacc
      661 caggaagcca cctcacccag tcatggactt tttcggccca cattttttag gtgattcttc
      721 ctcaccagcc tctatctcta ctcggacaga tgcccatgaa ataattgtgg gtgatcatct
      781 tgtctctgag gaaaattttc agaagttgga gaatgtgctt gacatctgga gctcaggtct
      841 taagacgaac attttatctg aactaagtaa gtggagactt aattttattg actggcaccg
      901 aatggagatg aaaaaggaaa gggaaaagca cgcggtgaca gtgaagcagc tgtcgagcca
      961 gatcgctgac ttgaaggagc tgcagaaagc cttcgagatt tccatcggaa gaaaggatga
     1021 ggtgatttcc agcttgtctc gtgccatcgg caagcagaag gaaaggatag agttaatgaa
     1081 aagcttcttc cgctggagaa tcggccatgt caaatccaga caggaaagtt atgaggggaa
     1141 actggctgac cagtactttg agagaacttt gctgaagaaa gtctggaagg gctggcgctc
     1201 cgtggtacag aggcagtgga aagatgtggt ggaacgggcg tgccaagcga gggctgaaga
     1261 agtgtgtgtg cagatctcca acgattatga agccaaactt gctatgttat ctttagcttt
     1321 ggaaaatgca aaagctgaga ttcaaagaat gcatcaagaa aaagaccatt tcgaagactc
     1381 catgaagaaa gcattcatga ggggagtgtg tgcattaaat ctggaagcca tgaccatatt
     1441 tcagaacaaa aatgacgcag ggatagactt cacaaataat aaaaaggaag agagtggccc
     1501 tggtggtcca ggaagagaac cttctgctca cttggatact tcttcgtcca caatgccatc
     1561 agcagttccg ttacagctgc tgccgtctgc aacattagca gcaggagtag ccagcgccac
     1621 tgccattccc tccactgctt ccctgacctc tgccggagct acatctgcct cttccggtca
     1681 cgttcccatc tctgttctca gtgccggatc tgcagccacg gctgccccag aagacacgtt
     1741 tgcaccaaga gttgtgactg cagcgcagca gaaagctggg aagacaatta cagcccggat
     1801 cacaggacgc tgtgattttg gttccaaaac tagaatcaac agcagcttgg ctatcatggg
     1861 agtttctcct cccatgagct cggtcgtcgt ggagaaacat cacccagtca cagtgcaaac
     1921 cattcctcag gcgaccgctg ccaagtaccc acgggccatc caccctgaaa gtggcttccc
     1981 agcctctagg tctgtcggag ccaggccagc ccacgcccag tccctctcaa acgttcagtc
     2041 gataaaagtg gttgactaga gggactgtgt tcactcagct ttcattcctc tgatgaggac
     2101 tttcctggga gcagcaagta ttttggattt gacctttctg tactgtcaga acatcatgga
     2161 cacattgtgt ccatcttttc agaattacaa gagacttccc catcctttgt aaccatatgt
     2221 atagattatg ttaacattat ttttatttaa acaattaagt agaactttta attaaaacaa
     2281 aacaacccat gactctgaac atgcaaaaaa aaaaaaaaaa aaaaaaaaa
//
