LOCUS       XM_039080111            3420 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus POC1 centriolar protein B (Poc1b),
            transcript variant X4, mRNA.
ACCESSION   XM_039080111
VERSION     XM_039080111.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3420
                     /gene="Poc1b"
                     /note="POC1 centriolar protein B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 11 ESTs, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments, including 15 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100362836"
                     /db_xref="RGD:2323942"
     CDS             903..1970
                     /gene="Poc1b"
                     /codon_start=1
                     /product="pOC1 centriolar protein homolog B isoform X4"
                     /protein_id="XP_038936039.1"
                     /db_xref="GeneID:100362836"
                     /db_xref="RGD:2323942"
                     /translation="MEYVPSALPLLPVPTHTLGTLRQNLLRSRFSPDGRLIVSCSEDK
                     TIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHY
                     QVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDG
                     ELFTSGGADAQVLVWRTSFNQVHYRDPSKRNLKRLHLEASPHLLDIYPRTPHGHEDKR
                     ETIEINPKLEVMDLHSSSPPVVDVLSFDSTTTADSTCRAVPGKGEDICRYFLNPLLMP
                     ECSSTIMKKKPEDVGDPPSENQRSVPLAVADALEHIMEQLNILTQTVSILEQRLSLTE
                     DKLKDCLENQQKLFSVIQQKS"
ORIGIN      
        1 ggagccgacc cttgggcagc gggaccgggg aaggggaacc acgcccggcc tggcaggcct
       61 gggaggtagc cccggaccta gagctccaca gatcgcccag ctccccggag caagacgcag
      121 tgcccgggtt gagcggtggg cgctgctccc gggatcccgg cgctcgggac tgagcgagag
      181 ttggctcccg gacttgcccg ctgggttccg cggcgcgcct gcgtcagaat cacctgggag
      241 gtttgaaggg cttgggaggc tgcggcgagc acctgcggct cggcgcggtg ggcgggtccc
      301 tcggcggctc gcaccggtgt ctgggctggg ggttcctccg cttggggatc cctccggatg
      361 ggagctgggg caatgcctga gcctctcagc cgggttatga tgcccgcgcc tcctcactgc
      421 tcgccgaagc tgcgatgtcc tcttcggccc tgggggggac aggcaacgtt gacctctgac
      481 ctcgagagtt cgaattctgc agccgctttc aaacctaaca actttccctc ctaggaggat
      541 ccgattctgg aacgttattt taaaggtcac aaagctgcga tcacctccgc tgacttcagc
      601 cccaactgca aacaaattgc tactgcttcc tgggacacct ttctcatgct atggagtttg
      661 aagccacacg ctagagctta cagatacgtg ggccacaagg atgttgtgac cagtctgcag
      721 ttctctccac aaggaaactt attagcctct gcctcgagag ataaaaccgt tagactctgg
      781 gttcttgaca ggaaaggaaa gtcttcagaa tttaaagcac acacagcccc agttcgaagt
      841 gtggactttt cagctgatgg ccagtttctg gttacagcat ctgaagacaa atccattaaa
      901 gtatggagta tgtaccgtca gcgcttcctc tactccctgt accgacacac acactgggta
      961 cgctgcgcca aaatcttctg cgttctagat tttcacccga cgggagattg atcgtgtcat
     1021 gtagtgagga taaaactatt aaaatctggg acactacaag caagcagtgt gttaataact
     1081 tctcggactc cgtaggattt gcaaattttg tggactttag ccctaatggt acatgcatag
     1141 cttcagcggg ttctgatcac gctgtgagaa tctgggatat aagaatgaac agattacttc
     1201 aacactatca agttcacagc tgcggtgtga actgtctgtc cttccatcct tcgggtaaca
     1261 gccttgtcac tgcctcgtct gacggaacag ttaagattct ggatctcgta gagggaagac
     1321 tcatatacac acttcaagga catacggggc ccgtctttac tgtttcattc tccaaggatg
     1381 gagagttatt cacatccggt ggtgcagatg cacaggtctt agtatggagg accagcttca
     1441 atcaagtgca ctatcgagat cctagtaaac gaaacctcaa aagactgcac cttgaggcct
     1501 ccccacacct tcttgacatc tacccacgaa caccacatgg ccatgaagac aaaagggaga
     1561 cgattgaaat caatccaaaa cttgaggtaa tggacttgca cagttcttct cccccagttg
     1621 tggatgtcct ttcttttgat tcaaccacaa cagcggattc cacctgtcga gctgtgccag
     1681 gcaagggtga agacatctgt aggtatttct tgaacccttt gttaatgcca gaatgttcat
     1741 caacaatcat gaaaaagaaa ccagaagatg taggtgaccc gccctctgaa aaccagagaa
     1801 gtgtaccgct agccgtggct gacgctctgg agcatattat ggaacaactg aacattctca
     1861 cccagactgt ttccattcta gagcaacgac tgtctttgac cgaagataag ctgaaagact
     1921 gccttgagaa tcagcaaaag cttttcagtg tcatccaaca gaagagctga gcaggaggtg
     1981 tgcaagctca ggctggtccc tgaagacgta ctcacacact caggacgttg cagaggccct
     2041 ccctccacac cctgccatgc actgatcact gtagattctt caggggtgag caacagaaca
     2101 aaggttcaag tcatttgtaa ggactgactt aaacacacaa atcactatca aggatcaagt
     2161 taagctcctc ccaggtacaa ttgcagtaat aaagttatga acatttaaat caccccattc
     2221 cccctccccc atgttgtttg aaatgtcagc ttctatttaa tgtgccaatc ctcaccagga
     2281 aagtaagcag acctctagat ctcattgtta aatcatttcc aagtgaccat gttcaggcaa
     2341 ttcctgaagg taattagtgt tatttcttag gtgagcacac ccttgagggg aaagcattcg
     2401 cttgctttca aatagcatct gagatgtaga aaacctgtca ttgagttggc tcatagttct
     2461 ttcaggtcaa aaaaaaaaaa caatctgcct cgaaaagatg ctccctcaga atttccacag
     2521 caagaatcag cttattttga ttagcaagag tgcttacatg acagagcagg cgtgttcctc
     2581 gtctgatggg aactgcatga ggcatttgtg tctctcctgt tacaggtgaa cgcactgagc
     2641 ggtctgggtc atactgaacc tgtgaccaca gtccatagag attatgtttg tgtggtgtca
     2701 gtgtgctaaa aagccaaaat gataaaaaat atgtggatat acacgaatcg catactgttg
     2761 cttagggtga tcctggtggc tgaaatagca catttttatt tagaaaaaga ttgcaacatc
     2821 tattttattt taatgaattg tgatttgaaa tgaaaacgag tcaggcattc tgaaagatct
     2881 tggttacaag ttgagaatgt ttctctatct caaacaaaat gggaatcaaa gtaaaaaaga
     2941 gcaaattcag gggttgggga tttagctcag cggcagagca cttgcctagc gagcgcaagg
     3001 ccctgggttc agtccccagc tctgaaaaaa agaaaaaaaa aagaaaaaaa aaaaaaaaag
     3061 agcaaattca aggcagccag ctcggggaga acgaaggcca cgcagggctg tgtagccagg
     3121 gcagatgcca tctgtgcacg gaaaacggag agacagcggc gtggggatgg agagactgtt
     3181 ctccaagcag tctcagttgt gtgcctctga gctggttttg tcttccgtct cgctgtgtgt
     3241 tgtaagtgcc ctctctgtcc tgcgactgtg accgtcttga cattttcacg agctcacaat
     3301 accaagtggc catgtatttt tataccttcg ttgagaagat tgcataagaa aatgaaatgt
     3361 aataccaact tttgtttact cttttttatg cttcaaataa agatacttct cttttttaaa
//
