LOCUS       NM_001130497            2193 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus patatin-like phospholipase domain containing 5
            (Pnpla5), mRNA.
ACCESSION   NM_001130497 XM_001078014 XM_235538
VERSION     NM_001130497.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Gao JG and Simon M.
  TITLE     A comparative study of human GS2, its paralogues, and its rat
            orthologue
  JOURNAL   Biochem Biophys Res Commun 360 (2), 501-506 (2007)
   PUBMED   17603008
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473950.2.
            
            On or before Jul 27, 2008 this sequence version replaced
            XM_235538.4, XM_001078014.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760386
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..2193
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /note="patatin-like phospholipase domain containing 5"
                     /db_xref="GeneID:300108"
                     /db_xref="RGD:1307495"
     exon            1..266
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /inference="alignment:Splign:2.1.0"
     CDS             14..1375
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /EC_number="3.1.1.3"
                     /codon_start=1
                     /product="patatin-like phospholipase domain-containing
                     protein 5"
                     /protein_id="NP_001123969.1"
                     /db_xref="GeneID:300108"
                     /db_xref="RGD:1307495"
                     /translation="MLQRSTKAEESAVPRPKRPIMDFLEVEGGWSLSFSGSGYLGLYH
                     VGATECLRQRAPRLIQGARRFYGSSSGALNALSIICGKSADFTCSNLLAMVKHVERLS
                     LGIFHPAYGPIEHIKKKLQDDLPDNSHIVASQRLGISLTRWPDGQNFIVTDFATRDEL
                     IQALVCTLYFPFYCGTIPPAFRGERFIDGALSNNLPFSNCPTTITVSPFNGTVDICPQ
                     STSSSLFELTAFNASFQISTRNFFLGFKSLFPPKPEVVADYCRQGYLDALRFLERRGL
                     TKEPVLWSLVSKEPPALVEGPRGTDHNQGQEAGLIVRWDIPNVLVKDVPNFELLSPEL
                     EAALKKACKRDFWAQIQCSVPGKVLTYLLLPCTLPFEYAYFRSRRLMQWLPEVPDDLY
                     WMQGLLKTTTLKVYSMAKSWLLSLGSPLVTSADAGLLWQQQGTAAAGNRPLNHRLADC
                     ALG"
     exon            267..499
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /inference="alignment:Splign:2.1.0"
     exon            500..565
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /inference="alignment:Splign:2.1.0"
     exon            566..775
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /inference="alignment:Splign:2.1.0"
     exon            776..836
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /inference="alignment:Splign:2.1.0"
     exon            837..1022
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /inference="alignment:Splign:2.1.0"
     exon            1023..1149
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /inference="alignment:Splign:2.1.0"
     exon            1150..1266
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /inference="alignment:Splign:2.1.0"
     exon            1267..2193
                     /gene="Pnpla5"
                     /gene_synonym="RGD1307495"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaacattcc ttcatgctcc agcgcagcac caaggctgag gagtctgcag tcccgcgtcc
       61 caagcgccca attatggact tcctggaggt agagggcggt tggagcctgt ccttctcagg
      121 ctctggctac ctgggcctct accacgtggg tgccaccgag tgtctgcgcc agcgcgcgcc
      181 gcgcctcatc cagggtgccc gccgtttcta cggctcttcc tcgggcgcgc tcaacgccct
      241 gagcatcatc tgtggcaagt ccgcagactt cacctgctcc aatctcctgg ccatggtgaa
      301 acacgtggag cggctgagcc tgggcatctt ccatccggcc tatggaccca ttgagcacat
      361 caagaaaaag ctgcaagacg acttacccga caacagccat attgtggcct cccagaggct
      421 gggcatctcc ctgacccgat ggcctgatgg tcagaacttc atagtcactg attttgccac
      481 tcgggatgaa ctcatccagg ctctggtctg caccttgtat tttccctttt actgtgggac
      541 gatacccccg gcattcagag gggagcgctt cattgacggg gccctgagca acaacctgcc
      601 cttctccaac tgtcctacca ccatcaccgt ctctcctttc aacgggacag tggacatctg
      661 tccccagagc acctcatcca gcctttttga gctaactgcc ttcaatgcca gtttccagat
      721 ctctaccagg aacttctttc tggggttcaa atccctgttt ccccccaagc ctgaggtggt
      781 ggctgactat tgcagacaag gttacctgga tgccctgagg ttcttggaga gacggggact
      841 taccaaggag ccagtgctgt ggtcgctggt ttctaaggag cctccagccc tcgtggaggg
      901 gcccagggga actgaccata accagggtca ggaggctggt ctgattgtca ggtgggacat
      961 ccccaatgtg ctggtaaagg acgtgcccaa cttcgagctg ctgtcaccgg agctggaggc
     1021 tgcattgaaa aaggcatgca agagagactt ctgggcccaa atccagtgtt cagtgccagg
     1081 gaaggtgctg acctacctgc ttttgccctg tacgctgccc tttgagtatg cctatttccg
     1141 gagcaggagg ctgatgcaat ggttgccgga ggtgccagat gacttgtatt ggatgcaggg
     1201 cctactgaag actaccaccc tcaaggtcta ctccatggcg aagtcatggc ttctcagctt
     1261 gggcagccca cttgtcacca gtgcagacgc tggtctcctc tggcagcagc aggggacagc
     1321 tgctgctggg aacaggccct tgaaccacag gttggcggat tgtgcactgg gctaggccag
     1381 ccacatgtgt gaccctctga actctgtcct tgccctcgtc ttgtgtgctt acgcctgctg
     1441 gagtgactct ggcaggtggc ctgtgttgga gcatccccca ggatctctga gctcagctcc
     1501 taactcagag aggttgctga attactggca taaagacctg gcttcctgtc catgctgtgt
     1561 catgtgcttc ttgtgtgggc aggtggtttc ctggcacgga acaagggctc tctgcagctg
     1621 ttcctgggac cttgatcccc caggtcctct ctggaagctt ctagcctact gtgtgctcag
     1681 gccactgcct ttcttcttgt cagttttgtc agagaagaaa agacagaaca agctaagaca
     1741 catctcagtt ccgggtctcc atgtgaggga cacagaaggc ataggtgtct agcagacgtg
     1801 tgttctgagc taggctggga ctggagatgg taccccaagg ctatgatcac ggtactgact
     1861 gctctgacag ggctccccgc ctcctttctc tgatccacac ttacctaagg ggttaatgcc
     1921 cgtgacaagt acagatggaa ggtggttggc tggggagttc attctagggg aaatcctggt
     1981 catagatgct tctcatgggg atggggccta ctgccactgc agcctggttt ctagggaagg
     2041 tttctgggtg gcacacgtac caaaggtcct ctggcctctc ctctgttctt cctatcccta
     2101 aagatagggt tggggacact ctgccaagtg gggatggtac tgtagagaag tggaggtgcc
     2161 ggtgagagaa gagattatgt aataaatgcc gag
//
