LOCUS       XM_017594771            1015 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus phosphomannomutase 1 (Pmm1),
            transcript variant X2, mRNA.
ACCESSION   XM_017594771
VERSION     XM_017594771.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086025) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1015
                     /gene="Pmm1"
                     /note="phosphomannomutase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 71
                     ESTs, 173 long SRA reads, 1 Protein"
                     /db_xref="GeneID:300089"
                     /db_xref="RGD:1310897"
     CDS             16..639
                     /gene="Pmm1"
                     /codon_start=1
                     /product="phosphomannomutase 1 isoform X2"
                     /protein_id="XP_017450260.1"
                     /db_xref="GeneID:300089"
                     /db_xref="RGD:1310897"
                     /translation="MGGPIATAPPCAAQLVPPGPRPASVARDPGGGCGDSASCAELQP
                     WQPLSRAPAGKSASSACLTWTGPSRQLARKLILRYQPSCRSYEAGCTLEERIEFSELD
                     KKEKIREKFVAALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDEDSFDIIHF
                     FGNETSPGGNDFEIYADPRTVGHSVVSPQDTVQRCRELFFPETAHEA"
     polyA_site      1015
                     /gene="Pmm1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caggccccgc ccctcatggg agggccgata gccactgctc ctccctgtgc cgcgcagctg
       61 gtcccgcccg ggccccgccc ggcctctgtg gcacgcgacc ctggcggtgg ctgcggcgat
      121 agcgcttcgt gcgcggagct acagccatgg cagccgctgt cgagggcgcc cgcaggaaag
      181 agcgcatcct ctgcctgttt gacgtggacg ggaccctcac gccagctcgc cagaaaattg
      241 atcctgaggt atcagccttc ctgcagaagc tacgaagcag gctgcaccct ggaggagagg
      301 atcgagttct cggagctgga caagaaagag aagatccggg agaagttcgt ggcagccttg
      361 aagacagagt ttgctggcaa ggggctaagg ttctcccgag gaggtatgat aagcttcgat
      421 gtcttccctg agggctggga taagcgctac tgcctggaca gtctggatga agacagcttc
      481 gacatcatcc acttctttgg aaatgagacc agtcctggtg ggaatgactt tgagatctat
      541 gcggaccccc ggacagtcgg ccacagcgtg gtctcccctc aggacactgt acaacgatgc
      601 cgagagcttt tcttcccaga gacagcgcat gaggcatgac ggtgcccaca gctgagcatt
      661 ggaccttcaa agagctctga ccaggcctga agacagaacc atgggatgcc acggttcccc
      721 tcccactggc ccaacgccta gcatcctgag gggcactgca ggtcacctac acaggaccag
      781 gtctgtggga accgtcccca gccaggtggc tcctgacgag acgcatccct gcactctacc
      841 ctgatggccc tggcctctga cgctgctggt tttggggaca gaataggttt taccacaggg
      901 tggcatggga cttatactct ggagcctgct agccacagac tgataagggg tggattggca
      961 aggaaggggc attactcaaa ggacttcgtc atagacatta aagttcacaa gacaa
//
