LOCUS       XM_006240779            2564 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus premelanosome protein (Pmel),
            transcript variant X1, mRNA.
ACCESSION   XM_006240779
VERSION     XM_006240779.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 11, 2024 this sequence was replaced by
            NM_001427188.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006240779.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2564
                     /gene="Pmel"
                     /note="premelanosome protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 63 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:362818"
                     /db_xref="RGD:1307513"
     CDS             408..2450
                     /gene="Pmel"
                     /codon_start=1
                     /product="melanocyte protein PMEL isoform X1"
                     /protein_id="XP_006240841.1"
                     /db_xref="GeneID:362818"
                     /db_xref="RGD:1307513"
                     /translation="MKSVPALSFFPGFPSSGGRGGRPMQMSIPFYIGAHSHPLVPLAA
                     ERRTSMGVQRRCFLPVLVLGALLALGSIEGSRNQNWHGVSRQLVTKVWNKQLYPEWTE
                     VQGSNCWRGGQVSLKVRNDGPTLVGANTSFSIALHFPGSQKVLPDGQVIWVNNTIING
                     SQVWGGQPVYPREPDDACIFPDGGPCPSGPKPPRRSFVYVWKTWGQYWQVLGGPESKL
                     SIPTGHARLGTHTMEVTVYHRRGSQSYVPLAHSSSTFTITDQVPFSVSVSQLQALDGE
                     NKRFLRNHPLIFALQLHDPSGYLAEADLSYTWDFGDSTGTLISRAPDVTHTYLEPGSV
                     TAHVVLQAAIPLVSCGSSPVPGTTDGYVPTAEPPGTTPRQGATTKGQMPTTEPPGTTV
                     VPTTEVTATTSEQMLTSAVTDTTLAEMSTPESTTPARPSGTTVAQATITELVRTTAEE
                     LPTPKPEGSDASPLLPTPSSTGSVSRLLDDTDTIMLVKRQVPLDCVLYRYGSFSLTLD
                     IVQGIESAEILQAVPSSEGDAFELTVSCRGGLPKEACMDISSPGCQPPAQRLCQPVPP
                     SPDCQLVLHQILKGGLGTYCLNVSLADANSLAVASTQLVVPGQEGSLGQAPLLVGVLL
                     VLVAVVLASLIYRHRLKKQDSVSQTPHGSTHWLRLPPVFCARRLGESSPLLSGQQV"
ORIGIN      
        1 ccagacaagg tttctctgtg taatcttggc tgtcctggaa ctcgctctgt aggccaggct
       61 ggaaaatcaa tcgggactct tattgtaaag gattctttgg ctagataaca gagtcgtttc
      121 tcagcctagc ttaatactgt ctcactgttt cggggttcat tggctgcttg tgttgtttca
      181 ttgctggcaa tctacactcc cagccccttc tggctgcttt tggataaagg tgctgtttct
      241 gtcttaagga actctttggt ttgactcaat tctcttgact ctgccttgct gaactgtgac
      301 tgtgaagtat atgaattgcg gctgcccatc agcgaactct ttccagaata agtgtgtgtc
      361 agtgaatgtg acccagtgaa accagacact gtcattggag caatgggatg aaatcagttc
      421 cggccctttc cttcttccca ggtttcccct cctctggagg gagaggagga aggcctatgc
      481 aaatgagcat ccccttctat ataggggctc attctcaccc cctggtacct ttggctgctg
      541 aaaggaggac cagtatgggt gtccagagaa ggtgcttcct tcctgtgctt gtgctgggtg
      601 ctctgctggc tttggggtct atagaaggat ccaggaatca gaactggcat ggcgtctcga
      661 ggcaacttgt aactaaagtc tggaataagc agctgtaccc tgagtggaca gaggtgcagg
      721 ggtctaactg ctggagaggt ggccaggtgt ctctgaaggt caggaatgat ggccctacac
      781 tggttggtgc aaatacctcc ttttccattg ctctgcactt ccctggaagt caaaaggtac
      841 tgccggatgg tcaggttatc tgggtcaaca acaccatcat caatgggagc caggtgtggg
      901 gaggacagcc agtgtatcca cgggaacctg atgatgcctg cattttccct gacggtggac
      961 cctgcccatc tggtcccaag cctccgagga gaagctttgt ttatgtttgg aagacctggg
     1021 gacaatactg gcaagttctg gggggcccgg agtccaagct gagcattcca acgggtcacg
     1081 caaggctggg cacacacacc atggaagtga ctgtctacca ccgacggggg tcccagagct
     1141 acgtgcccct ggctcactcc agttcaacct tcaccatcac tgaccaggtg cccttctccg
     1201 tgagtgtgtc ccagctacag gccttggatg gagagaacaa gcgcttcctg agaaaccatc
     1261 ctctcatctt tgcccttcag ctccacgacc ccagtggcta tttggctgag gctgacctct
     1321 cctacacctg ggactttgga gacagtactg gaaccctgat ctctcgggca cctgacgtca
     1381 ctcacactta tctggagcca ggctcagtca ctgcccatgt ggtgctgcaa gctgccattc
     1441 ctcttgtttc ctgtggttcc tccccagtgc caggtaccac agatggctat gtgccaactg
     1501 cagagccccc tggaaccacg cccaggcaag gagccactac aaaggggcag atgccgacca
     1561 cagagccccc tggaaccacg gttgtgccaa ccacagaggt cacagctacg acctctgaac
     1621 agatgctgac ctcagcggtc acagatacga cgctggcaga gatgtcaact ccagagagta
     1681 ccacacccgc aaggccctct ggaaccacag ttgcacaggc aacaatcaca gagttggtga
     1741 gaactactgc tgaagaatta cccaccccta aacccgaggg ttcagatgcc agcccactgc
     1801 tgcccacacc aagttctaca gggtccgtta gccgtctact ggatgacaca gacaccataa
     1861 tgcttgtgaa gagacaagtc cccctggatt gtgttctata tcgatatggt tctttttccc
     1921 tcaccctgga tatcgtccag ggtattgaaa gtgctgagat cctgcaggct gtgccatcca
     1981 gtgaggggga cgcctttgag ctgactgtgt cctgccgagg cgggctaccc aaggaagcct
     2041 gcatggatat ttcatcacca gggtgccagc cccctgccca gaggctgtgc cagcctgtgc
     2101 caccaagccc agactgccag ctggttctac accaaatact gaaaggcggc ttggggactt
     2161 attgcctcaa tgtgtctttg gctgatgcca acagcctggc agtggccagc acccaacttg
     2221 ttgttcctgg tcaagaaggc agccttgggc aggctccctt gcttgtaggt gtcttactgg
     2281 tgttggtggc tgtggtcctt gcatctctga tatataggca cagacttaag aagcaggact
     2341 cagtttccca aacgccacat ggcagcactc actggctgcg cctgcctcca gtcttctgcg
     2401 ctcgccgcct cggtgaaagc agtccgctcc tcagcgggca gcaggtttaa gcattctcca
     2461 tgctgtggat ttcctggggc tgacagcagt gcctgtattt tctgcagtct tccctccaag
     2521 attaccaacc aatatctgaa ataaattctc agaaccttgc ggta
//
