LOCUS       NM_001109068            3790 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus peptidase M20 domain containing 1 (Pm20d1), mRNA.
ACCESSION   NM_001109068 XM_001059366 XM_573447
VERSION     NM_001109068.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3790)
  AUTHORS   Long JZ, Svensson KJ, Bateman LA, Lin H, Kamenecka T, Lokurkar IA,
            Lou J, Rao RR, Chang MR, Jedrychowski MP, Paulo JA, Gygi SP,
            Griffin PR, Nomura DK and Spiegelman BM.
  TITLE     The Secreted Enzyme PM20D1 Regulates Lipidated Amino Acid
            Uncouplers of Mitochondria
  JOURNAL   Cell 166 (2), 424-435 (2016)
   PUBMED   27374330
REFERENCE   2  (bases 1 to 3790)
  AUTHORS   Yan YP, Mo XY, Tian J, Zhao GH, Yin XZ, Jin FY and Zhang BR.
  TITLE     An association between the PARK16 locus and Parkinson's disease in
            a cohort from eastern China
  JOURNAL   Parkinsonism Relat Disord 17 (10), 737-739 (2011)
   PUBMED   21840748
REFERENCE   3  (bases 1 to 3790)
  AUTHORS   Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta
            R, Wang NS and Knepper MA.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473958.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001059366.1, XM_573447.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5756307,
                              SAMEA5760384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3790
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q13"
     gene            1..3790
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /note="peptidase M20 domain containing 1"
                     /db_xref="GeneID:498226"
                     /db_xref="RGD:1564063"
     exon            1..208
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..1551
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /EC_number="3.4.17.-"
                     /note="probable carboxypeptidase PM20D1;
                     N-fatty-acyl-amino acid synthase/hydrolase PM20D1"
                     /codon_start=1
                     /product="N-fatty-acyl-amino acid synthase/hydrolase
                     PM20D1 precursor"
                     /protein_id="NP_001102538.1"
                     /db_xref="GeneID:498226"
                     /db_xref="RGD:1564063"
                     /translation="MAELLVILPTRAAVLLLFFATVSGSTGPGSRESRGSSRIPSQFS
                     EEERVAMKEALKGAIRIPTVSFSHEESNTTALAEFGEYIRKAFPTVFHSNLIQHEVVG
                     KYSHLLTVRGSDPSLQPYMLMAHFDVVPASEEGWEVPPFSGLEQNGFIHGRGALDNKN
                     SVMAVLQALELLLIRKYSPKRPFFIALGHDEEVSGTKGAQQISALLQTRGVQLAFLVD
                     EGSFILEDFIPNLKKPFAMISVTEKGALDLMLQVNMTPGHSSAPPKETSIGILSAAVS
                     RLEQTPMPNMFGNGPLKKTLKLLANEFSFPTNIILGNLWLFRPIVSRVMERNPITNAL
                     VRTTTALTMFNAGIKVNVIPPLAQATVNFRIHPSQTVHEVVELVQNIVADDRVQLHVL
                     RSFEPLPVSPSDDQAMGYQLLQQTIQSVFPEVKIIVPGICIGNTDTRHYVNLTNGLYR
                     FNPVFLKPQDFSSVHGINEKISVESYQNQVKFIFELIQNADTYSKPVPHQHEL"
     exon            209..295
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            296..528
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            529..615
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            616..749
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            750..869
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            870..945
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            946..1007
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            1008..1086
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            1087..1158
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            1159..1327
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            1328..1427
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
     exon            1428..3790
                     /gene="Pm20d1"
                     /gene_synonym="RGD1564063"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 taaactccag cctgactggc ggcgcgccat cggagagaca tggctgagct acttgttatc
       61 ttgcccaccc gggcagctgt gctccttctc tttttcgcta ccgtctcagg atccacgggc
      121 cctggcagca gggaaagtcg aggatcgtcg cggatccctt cccagttcag cgaggaggag
      181 cgcgtcgcta tgaaagaggc gctgaaaggt gccatccgga ttcccacagt gtctttcagc
      241 cacgaggaat ccaacaccac agcccttgct gagtttggag aatatatccg aaaagccttt
      301 cctacagtgt tccacagcaa ccttatccaa cacgaagtcg tggggaagta tagccacctg
      361 ctcaccgtcc gaggctcgga ccccagtttg cagccctaca tgctgatggc tcacttcgac
      421 gtggttcctg cctctgaaga aggatgggag gtgcccccgt tctcaggcct ggagcaaaat
      481 ggcttcatcc atggccgggg tgcgctggac aacaaaaact ctgtgatggc agtcctgcag
      541 gctttggagc tcctgttgat cagaaaatac agccccaaaa gacctttctt cattgctttg
      601 ggccatgatg aggaggtgtc tgggacaaag ggggctcagc agatctcagc actcttacag
      661 acgaggggtg tccagctagc ttttcttgtg gatgaaggga gctttatctt ggaagacttc
      721 attccgaacc tcaagaagcc gtttgccatg atttcagtca ccgagaaggg tgcccttgac
      781 ctcatgctgc aagtaaacat gactccaggc cactcttcag ctcccccaaa ggagacaagc
      841 attggaatcc tttctgccgc tgtcagccga ctggagcaga caccaatgcc aaacatgttt
      901 ggaaacgggc cattgaagaa gacattgaag ctactggcaa atgagttttc cttccctacc
      961 aatataatct tggggaacct gtggctattc cgtcccattg taagcagggt aatggagagg
     1021 aatcccataa cgaatgcatt ggtcagaact accacagccc tcaccatgtt caatgcagga
     1081 atcaaggtga atgtcatccc cccattggct caggcgacag tcaacttccg aattcaccct
     1141 tcgcagacag tacacgaggt cgtagaactc gtccagaaca ttgtggctga tgaccgagtc
     1201 cagttgcatg tgttgagatc ctttgaacca ctgcccgtca gcccctctga tgaccaggcc
     1261 atgggctacc agctgcttca acagaccata cagtctgtct tcccggaagt caagatcatt
     1321 gtccccggta tttgtattgg caacacggac acccgacact atgtcaacct gaccaatggc
     1381 ttgtaccggt tcaaccccgt tttcctgaag cctcaggact tcagtagtgt ccatggaatc
     1441 aatgagaaaa tctccgttga gagctaccag aaccaggtga agttcatctt tgagttgatc
     1501 caaaatgctg acacctacag caagccagtt cctcatcagc atgaactatg agacaaggac
     1561 ccagctgggt gaggggcgcc cagcactgag ccaggactca cctaagggga gaggagctgg
     1621 tattaaggaa aggtttggtg gaaaccatcc tgtcatgcag ggttcacctg cctggctccc
     1681 tccttcactc accgaggagg aaagggagat gaacataatc tcacctgtca tcctcctgac
     1741 acctgtgttc ttcccatgag tggcatctgc tgcctgtcct gcctgttggc ctgtctcatg
     1801 ccggtggtta ctaactattc cactttccca gcctgtctta acaaatacag attttgggaa
     1861 cacctcaagc agggtttaat ctagagtatt gacttcggat acttgagccg gactgtcttc
     1921 tagaatttcc tttctcctgt cttctctcca acttgggagc tgccccttgg cctctttctt
     1981 cctgcctctg cttccttcct ccaatctccg gttcgtttcc atatctgcag ttaggactca
     2041 aactgagaag ctcccgtgat cacagtcaaa taaaggggtc cgtgtagtga ctgtcaagct
     2101 ggcctccgtc aagtgagtgg gaggtggaga ctttgcaaga aacccagaac tcctagttcc
     2161 agaggcttgg gctcttggga ttgttgttcc cctcccctgc cctgttcctg ccacctgctg
     2221 ttgctgcccc acctcaggaa gctctaatct gtgaaagcat ttccctggca cagtttatgg
     2281 gctgagctcc caagagagga acactcaaga tccagcttct cagtggctcc ctggccctgg
     2341 cttgtcctgt ttcagaatga ccaaggggaa gtggagggca aggaagggga tggttagagg
     2401 ggctcttccc tggacaaaag aagcaagcgt ccattagcgt atattggagc tcttgtcttc
     2461 tctctggact ccaaccctac gcatatttgg atgcacttag tagctgccag gtggggagca
     2521 ttggaaagcc acatttcttg gctcaaggcc accatctctg ctttgtggat gacaagggga
     2581 gtcaaggtca cacagggaga cacagaaacg gagcttgaaa agctccctct tttcccctct
     2641 ccagactagc accttctgtg tctcccagca gtttgacagt tctaggtttg cttgcccccc
     2701 acctccttgg aaatccccat tctccctcct cccaagtact taccttcccc ccaggatgtg
     2761 aactgttcct tgaagctctg acttaattgt tatcattaga aacagtgtgg ggattattcg
     2821 agctttttag ctactcctgc taagattcac attccttcct cactctggct ttttggccaa
     2881 ctcagtactt attcagcctt agttggaggg caagcttaag aacaaagata atcctttact
     2941 ttcgtgcaga gctctgtgag atcgtcttat gcgtgcctta tctcagccct ctgagcatgc
     3001 tgtcattacc ccttcctaca gagactggct acacatcttg ctggaaacag ttgtcaaacc
     3061 ttcattacct tgccatcggg accattctct gatcctgaat cacctactcc ccactgattt
     3121 cttatttaat tctcataact actgtggcat gagtaccccc actgttgtta tgttgtaaac
     3181 aaagtcatac gaggaaaagt attcacaggg agggaacatg gccgactggg gcttgccttt
     3241 gtagggtcat taggattagg ccctgggtct gagctccatc cttgacttat taatggactt
     3301 tttaagaaga gagtttgggc aaatagacac atttaatctg attcggacaa ggcaccatga
     3361 atacctgtgt caaaacatca cagtactcca tccactaaat cagagaaaga gagggggaaa
     3421 gagagcagaa gacagacagg ttcatacatg tacgtcatgt gagggcctat accatctctt
     3481 gcacaaggag acctctatcc atcagggggc aaaccagtgc tccccacatg attttaacac
     3541 tcccgagctg tgagccgaaa taaacgtctt tttttttata actcgacccg gtttgtggtg
     3601 tcatgttctt ggaaacagaa aacaagagta gcacaatttg aatgcactat cactccattt
     3661 tgtaaaaagg aagtgccagg tttaaaaatc ccaaggctgc acaagaccat gccagtgtta
     3721 agaacagggt ctctctgaat tcaaagtcta tgctactagt cctgaagaga aaacagactc
     3781 ccaaaagccc
//
