LOCUS       NM_001191999            1581 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus phospholipid scramblase family, member 5
            (Plscr5), mRNA.
ACCESSION   NM_001191999 XM_006243540 XM_576447
VERSION     NM_001191999.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On or before Oct 3, 2022 this sequence version replaced
            XM_006243540.4, NM_001191999.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.197328.1,
                                           SRR26360176.1098120.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN14984014, SAMN14984018
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-140               JAXUCZ010000008.1  101597207-101597346
            141-308             JAXUCZ010000008.1  101602173-101602340
            309-493             JAXUCZ010000008.1  101607746-101607930
            494-536             JAXUCZ010000008.1  101612085-101612127
            537-757             JAXUCZ010000008.1  101612997-101613217
            758-919             JAXUCZ010000008.1  101614163-101614324
            920-1081            JAXUCZ010000008.1  101616159-101616320
            1082-1164           JAXUCZ010000008.1  101617989-101618071
            1165-1581           JAXUCZ010000008.1  101618155-101618571
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q31"
     gene            1..1581
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /note="phospholipid scramblase family, member 5"
                     /db_xref="GeneID:501036"
                     /db_xref="RGD:1564500"
     exon            1..140
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /inference="alignment:Splign:2.1.0"
     exon            141..308
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /inference="alignment:Splign:2.1.0"
     CDS             296..1120
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /codon_start=1
                     /product="phospholipid scramblase family member 5"
                     /protein_id="NP_001178928.1"
                     /db_xref="GeneID:501036"
                     /db_xref="RGD:1564500"
                     /translation="MASKDSQNQKPRSLPGFLPRATNPDQNSQEASSNPGKQTRQQPH
                     VSQPSSFLPTAILPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSSGQRIY
                     FAVEESICFNRNVCSTLRACTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAP
                     PGTIVGFVAQKWDPFQPKFTIQNANKEDILKIVGPCTTCGCFGDVDFEVKTVDEKVTI
                     GKISKYWSGFVNDVFTNADNFGIHVPEDLDVTLKAAMIGACFLFDFMFFEHSLAGL"
     exon            309..493
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /inference="alignment:Splign:2.1.0"
     exon            494..536
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /inference="alignment:Splign:2.1.0"
     exon            537..757
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /inference="alignment:Splign:2.1.0"
     exon            758..919
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /inference="alignment:Splign:2.1.0"
     exon            920..1081
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /inference="alignment:Splign:2.1.0"
     exon            1082..1164
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /inference="alignment:Splign:2.1.0"
     exon            1165..1581
                     /gene="Plscr5"
                     /gene_synonym="RGD1564500"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcagtgaaga tagcagtgtg cagagatgct gggctggagg ctgcagtgac cgaagcactt
       61 gttgcagtat tttggtgata tttgtgaaga tgcaaccata cgttgagagg aaaatgcagc
      121 ctcagtgagc aaggcacaag ataaaatcaa acactctaga accgcaaggc actgtgtttc
      181 tgctgtctgt aagctgacat gaggccgcca gcaagtatcg ggagttttgt tcattctggt
      241 ctcaacagga aaagcctttt cacctggctg cctttgaaga gctactcaga ctgccatggc
      301 ttctaaagat tcccagaacc aaaagcctag aagtctgcct ggttttcttc ctcgagctac
      361 aaacccagat caaaactctc aagaggcttc ttccaatccc gggaaacaaa caaggcagca
      421 gccccatgtc tctcagccaa gcagtttcct gccaacagcc attctccctc ctggtctaga
      481 gtatctaagc cagctggacc tgataatcat ccatcagcag gtagaacttc ttgggatgat
      541 actcggcact gagacctcca acaaatatga gatcaaaaac agctcgggac aaagaattta
      601 ctttgcagtg gaagaaagca tctgttttaa tcgtaatgtg tgctccacgc tgcgagcctg
      661 caccctgagg atcacagaca actcgggtcg agaggtgatt acagtgaaca ggcccctaag
      721 gtgtaacagc tgctggtgcc cttgctacct acaagagcta gaaatccaag ccccccctgg
      781 gactatagtt ggttttgttg cacagaagtg ggaccccttt cagcccaaat tcacaatcca
      841 aaatgcaaac aaagaagata ttttgaaaat cgttggtcct tgtacaacct gtggctgctt
      901 tggcgatgtg gactttgagg tgaaaactgt tgatgaaaag gttacaattg ggaagatctc
      961 caagtactgg tcgggatttg tcaacgacgt gttcacaaat gctgacaact ttgggatcca
     1021 tgttcctgaa gatctcgatg tgacactcaa agcagccatg attggtgctt gctttctctt
     1081 tgattttatg ttctttgaac attcgcttgc tggattataa caagcacgat ggcgaaaaca
     1141 ataaaatatg caaaacgcat ttcaatgtcc cttgggctct gagtttcact tctgaatggt
     1201 ctgaatgatt tgattttttt ataactaaat gttaattatt atatttatta aaacacggtt
     1261 taatgagaca attacctggt tgtgaatgca cgatagctaa atatgcaatt accaccgcga
     1321 gtccaaggtt actgtgagag attaccattc tctttttatt cttttgaagt cactgcaatg
     1381 gtaagcatga aagatgagag ctaaggcatg cagcatcact gatgggaatt cagtgtttag
     1441 agaacacttt gaagtgttgc tggtactaca ggtggttact aatcaaaagg ctcggatttc
     1501 taaaatatct tttcaaaagt agcttctttt gactttctta aattttattt cttttttttt
     1561 aaaaaaagtc tcgtgtattc t
//
