LOCUS       NM_001108178            1961 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus plastin 1 (Pls1), mRNA.
ACCESSION   NM_001108178 XM_001065065 XM_236560
VERSION     NM_001108178.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Revenu,C., Ubelmann,F., Hurbain,I., El-Marjou,F., Dingli,F.,
            Loew,D., Delacour,D., Gilet,J., Brot-Laroche,E., Rivero,F.,
            Louvard,D. and Robine,S.
  TITLE     A new role for the architecture of microvillar actin bundles in
            apical retention of membrane proteins
  JOURNAL   Mol Biol Cell 23 (2), 324-336 (2012)
   PUBMED   22114352
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Schwander,M., Kachar,B. and Muller,U.
  TITLE     Review series: The cell biology of hearing
  JOURNAL   J Cell Biol 190 (1), 9-20 (2010)
   PUBMED   20624897
  REMARK    Review article
REFERENCE   3  (bases 1 to 1961)
  AUTHORS   Grimm-Gunter,E.M., Revenu,C., Ramos,S., Hurbain,I., Smyth,N.,
            Ferrary,E., Louvard,D., Robine,S. and Rivero,F.
  TITLE     Plastin 1 binds to keratin and is required for terminal web
            assembly in the intestinal epithelium
  JOURNAL   Mol Biol Cell 20 (10), 2549-2562 (2009)
   PUBMED   19321664
REFERENCE   4  (bases 1 to 1961)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   5  (bases 1 to 1961)
  AUTHORS   Chafel,M.M., Shen,W. and Matsudaira,P.
  TITLE     Sequential expression and differential localization of I-, L-, and
            T-fimbrin during differentiation of the mouse intestine and yolk
            sac
  JOURNAL   Dev Dyn 203 (2), 141-151 (1995)
   PUBMED   7655078
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168847.1.
            
            [WARNING] On Oct 8, 2024 this sequence was replaced by
            NM_001108178.3.
            
            On Sep 14, 2008 this sequence version replaced NM_001108178.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168847.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q31"
     gene            1..1961
                     /gene="Pls1"
                     /note="plastin 1"
                     /db_xref="GeneID:315926"
                     /db_xref="RGD:1307142"
     exon            1..42
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            43..124
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..1438
                     /gene="Pls1"
                     /codon_start=1
                     /product="plastin-1"
                     /protein_id="NP_001101648.2"
                     /db_xref="GeneID:315926"
                     /db_xref="RGD:1307142"
                     /translation="MINLSEPDTIDERAINKKKLTPFTVSENLNLALNSASAIGCTVV
                     NIGAQDLKEGKPHLVLGLLWQIIKVGLFADIEISRNEALIALLKEGEELEELMKLSPE
                     ELLLRWVNYHLTNAGWRTISNFSQDIKDSKAYFHLLNQIAPKGDRDGGSAVTIDLSGF
                     NEKNDLKRAGFMLQEADKLGCRQFVTPADVVSGNPKLNLAFVANLFNTYPCLHKPDNN
                     DIDLNLLEGESKEERTFRNWMNSLGVNPYINHLYSDLADALVIFQLYEMIRVPVNWNH
                     VNKPPYPALGGNMKKIENCNYAVELGKNEAKFSLVGIAGQDLNEGNATLTLALVWQLM
                     RRYTLKVLSDLGEGEKVSDDIIIKWVNQTLKSANKSTSISSFKDKSISTSLPVLDLID
                     AIAPNAVRPEMIKREHLTDEDKLNNAKYAISVARKIGARIYALPDDLVEVKPKMVMTV
                     FACLMGKGLNRLK"
     exon            125..290
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            291..433
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            434..529
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            530..725
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            726..804
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            805..919
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            920..1053
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            1054..1177
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            1178..1302
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
     exon            1303..1936
                     /gene="Pls1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggtagcctt ttcagatcgc tcgcagatgg catccttctt tgcaaaatga tcaacttatc
       61 tgaaccagac acgattgacg aaagagccat caataagaag aagctcactc cgttcaccgt
      121 gtcggaaaac ttgaacctag ccctgaattc tgcttcagcc atcggctgca ccgtggtcaa
      181 catcggtgct caggatctca aggagggaaa gccccacttg gtcttggggc ttctctggca
      241 gatcatcaaa gttggtctct ttgctgacat tgagatttcc aggaatgaag ccttgatcgc
      301 gctgctaaaa gaaggggagg agctggagga gctgatgaag ctgtctcctg aggaactgct
      361 gctgcgatgg gtgaactacc atctgaccaa tgcggggtgg cgcaccatca gcaacttcag
      421 ccaggacatt aaggactcaa aagcctattt ccacctcctc aatcagattg ctcccaaagg
      481 tgaccgagat ggtgggtctg ctgtaaccat tgatctttcg ggatttaacg agaagaacga
      541 cctgaagcgt gctggattca tgctccagga agcagataag cttggctgca gacagtttgt
      601 cacgcctgca gatgtggttt cagggaaccc taagctaaac ttagcctttg tagcgaatct
      661 ttttaacaca tacccatgtc tccacaagcc tgacaacaat gacattgatc tcaacttact
      721 ggaaggagag agcaaggaag agaggacatt tcggaactgg atgaattcac tgggtgtcaa
      781 cccatacatc aatcacttgt acagtgacct cgcagatgcc ttggtgatct ttcagctcta
      841 tgagatgatc cgcgtgccag tcaactggaa ccatgtcaac aagcctccct accctgccct
      901 tggagggaac atgaagaaga ttgaaaactg caactacgca gttgagctcg ggaagaacga
      961 ggccaaattc tctttggttg gtatcgccgg acaggactta aatgaaggga atgcaacact
     1021 taccctggct ctggtgtggc agttgatgag aagatacacg ctgaaagttc tgtcagacct
     1081 gggagaaggt gaaaaagtca gtgatgatat cattattaaa tgggtcaatc agacccttaa
     1141 aagtgcaaat aaaagtactt ctatttccag cttcaaggat aaatctatta gtacaagctt
     1201 gcctgtctta gatctaatag atgccattgc accaaatgca gtccgtccgg aaatgatcaa
     1261 gagagaacac ttgactgacg aagacaagct gaacaatgct aaatatgcca tttcagttgc
     1321 tcggaagatc ggcgcccgga tatacgcgct gcctgatgac ctcgtggaag tgaagccgaa
     1381 gatggtgatg actgtgtttg cctgcttaat gggaaaggga ctgaacagac tgaaataatg
     1441 aaccatgtac tgtgacctgt cacattacac gcatcgaacg tctcagttta cagaattttg
     1501 aaatgtagtg ggtatcaaat cagaatatct gtatgctcca aacagttctg tgtccagtaa
     1561 tgaataatat cttgtccata ccagttagaa tttgtcaatc tattttttag ataacacaat
     1621 taccttaaca atcaacacca attcaggaat gttttcctca agctgctatt tcataattat
     1681 tttattccct aagagtctta ccaaaataag actaatcatt catttttcat ggctcaaaaa
     1741 agacctgtat aaagttttgt cagatccttc tattaaattt gtttggattt ttttgatgtg
     1801 ttgtttaatt ttgattaaaa atgtacctaa agtcgtattc taactttaat ttaatccttt
     1861 tgtttttcct ccttaactat gtaaagcaat ctaaaatttt ctgtaaattt ctatatcata
     1921 taaaaattta aaaggaaaaa aaaaaaaaaa aaaaaaaaaa a
//
