LOCUS       XM_006231205             996 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus plasminogen receptor with a C-terminal
            lysine (Plgrkt), transcript variant X2, mRNA.
ACCESSION   XM_006231205
VERSION     XM_006231205.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006231205.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006231205.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..996
                     /gene="Plgrkt"
                     /gene_synonym="Plg-R(KT); RGD1306839"
                     /note="plasminogen receptor with a C-terminal lysine;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 11 ESTs, 5 long SRA reads, 4
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 134 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:293888"
                     /db_xref="RGD:1306839"
     CDS             265..708
                     /gene="Plgrkt"
                     /gene_synonym="Plg-R(KT); RGD1306839"
                     /codon_start=1
                     /product="plasminogen receptor (KT) isoform X1"
                     /protein_id="XP_006231267.1"
                     /db_xref="GeneID:293888"
                     /db_xref="RGD:1306839"
                     /translation="MGFIFSKSMNENMKNQQEFMVMHARLQLERQLIMQNEMRERQMA
                     MQIAWSREFLKYFGTFFGIATISLAAGAIKRKKPAFLIPIVPLSFIFTYQYDLGYGTL
                     LQRMKSEAEDILETEKTKLELPKGLITFESLEKARREQSKFFSDK"
ORIGIN      
        1 tctgtgccgc gatcgctctg gagctctggc tagaggcctc tgcagtggcc accgccccgc
       61 accgcgtcgc gtgagtgcat cgggcagcag gaacctggga gggagggtcg gctcggttgc
      121 atggccccgc acagctgcag ctccggctag gtgatctcca gagggacact cctaccttcc
      181 ttctaccttt agctgtgaac ctgagatttc cctgacacat ccaaagtcca agtccaagag
      241 tgcaaggccc agaaagaggt caagatgggg tttatatttt cgaaatctat gaatgaaaac
      301 atgaaaaatc aacaggagtt catggttatg cacgctcgac ttcagctgga aagacagctg
      361 atcatgcaga atgagatgag agaacggcaa atggctatgc agatcgcctg gtctcgggaa
      421 ttcctcaaat attttggaac gttttttggc atcgcaacga tctctttagc agctggagca
      481 ataaagcgaa agaagccagc ttttcttatt cctatagttc ccctaagttt catcttcacc
      541 taccagtatg acctgggcta cggaactctt ctacaaagaa tgaaaagtga agctgaagac
      601 atattggaaa cagaaaagac aaagttggag ctgccaaaag gactcatcac ctttgaaagc
      661 cttgaaaaag ccagaaggga gcagagtaaa ttcttctcag acaaatgaag tcccacttat
      721 cctcgaagca catactgcgt ctcaaaagca caaaatcgtt ggcttgaatc atggtgttta
      781 cagttttttt aaatgatcaa gattttgata caatgcattt ttattttaga atattaaaat
      841 ccgaagtgag tttgttgaac tattttaaaa taaaatttct aacactcaac caaaccatgg
      901 cagtatccta agtaacatta agatttctcg tgtgtatgtg tgtttttttc aagtatccaa
      961 gtgcaaaatt aataaattat gttgttctga atctga
//
