LOCUS       NM_001014209            1368 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus placenta expressed transcript 1 (Plet1),
            transcript variant 1, mRNA.
ACCESSION   NM_001014209 XM_343387
VERSION     NM_001014209.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Nowell,C.S., Bredenkamp,N., Tetelin,S., Jin,X., Tischner,C.,
            Vaidya,H., Sheridan,J.M., Stenhouse,F.H., Heussen,R., Smith,A.J.
            and Blackburn,C.C.
  TITLE     Foxn1 regulates lineage progression in cortical and medullary
            thymic epithelial cells but is dispensable for medullary sublineage
            divergence
  JOURNAL   PLoS Genet 7 (11), e1002348 (2011)
   PUBMED   22072979
REFERENCE   2  (bases 1 to 1368)
  AUTHORS   Raymond,K., Richter,A., Kreft,M., Frijns,E., Janssen,H.,
            Slijper,M., Praetzel-Wunder,S., Langbein,L. and Sonnenberg,A.
  TITLE     Expression of the orphan protein Plet-1 during trichilemmal
            differentiation of anagen hair follicles
  JOURNAL   J Invest Dermatol 130 (6), 1500-1513 (2010)
   PUBMED   20130590
REFERENCE   3  (bases 1 to 1368)
  AUTHORS   Zhao,S.H., Simmons,D.G., Cross,J.C., Scheetz,T.E., Casavant,T.L.,
            Soares,M.B. and Tuggle,C.K.
  TITLE     PLET1 (C11orf34), a highly expressed and processed novel gene in
            pig and mouse placenta, is transcribed but poorly spliced in human
  JOURNAL   Genomics 84 (1), 114-125 (2004)
   PUBMED   15203209
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Mar 19, 2021 this sequence version replaced NM_001014209.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ228964.1, BC088858.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06621351, SAMN09345330
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-223               JAXUCZ010000008.1  59738639-59738861
            224-422             JAXUCZ010000008.1  59743224-59743422
            423-478             JAXUCZ010000008.1  59745599-59745654
            479-1368            JAXUCZ010000008.1  59749173-59750062
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q23"
     gene            1..1368
                     /gene="Plet1"
                     /note="placenta expressed transcript 1"
                     /db_xref="GeneID:363060"
                     /db_xref="RGD:1359217"
     exon            1..223
                     /gene="Plet1"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..807
                     /gene="Plet1"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; placenta-expressed transcript 1 protein"
                     /codon_start=1
                     /product="placenta-expressed transcript 1 protein isoform
                     1 precursor"
                     /protein_id="NP_001014231.1"
                     /db_xref="GeneID:363060"
                     /db_xref="RGD:1359217"
                     /translation="MPALRTLLPHLGLFLCLALCFSPSFSLSNNESCILYDQVYPSDN
                     LINASAEEVSGENTTYTVTVPVNDSVSAVILKAEKDNKPVGTWSGAYEKCNNSVVYNL
                     TSLNNSAFQTNWTVPSSEDVTKVNLTIFIVINRTATVSSVKLEPKETSSLASTPESQT
                     SAMTTAMTSAMTTAKTTAVATNSSTDVTSDNSTAVTTANSTAVTTANSTAVTTAKTTT
                     MTTATTTAKSLAIRTLCSPLAGALHILLVFLISKLLF"
     exon            224..422
                     /gene="Plet1"
                     /inference="alignment:Splign:2.1.0"
     exon            423..478
                     /gene="Plet1"
                     /inference="alignment:Splign:2.1.0"
     exon            479..1368
                     /gene="Plet1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tactactgcc aggtcctgca acccaaacag accggaacca tgcctgcact ccgcaccttg
       61 ctgccacacc tggggctgtt cctgtgcctg gctctgtgct tttccccttc cttctctctc
      121 agcaataatg agtcctgcat actttacgat caagtctacc cctctgacaa cttgatcaac
      181 gcttcagctg aggaggtctc tggtgagaat acaacctaca cagtgacagt ccctgtgaac
      241 gattcagtca gtgctgtgat cctgaaagct gaaaaagaca acaaaccagt gggcacctgg
      301 agcggagcat acgagaagtg caacaacagc gttgtctaca acttgacatc tctaaacaac
      361 tcagccttcc agacaaactg gaccgttcct agttctgagg acgtgactaa agtcaacctg
      421 acgatcttca ttgtcatcaa ccgcacagct acagtgtcat ctgtgaaact ggagccaaaa
      481 gaaacttcaa gcttggcctc tactcctgag agccagacct cagccatgac tacagccatg
      541 acctcagcca tgactacagc caagactaca gccgtggcca caaacagtag cacagacgtg
      601 acctcagaca atagcaccgc cgtgaccaca gccaatagca ccgccgtgac cacagccaat
      661 agcacagccg tgaccacagc caagaccaca accatgacca cagccacgac cacagccaaa
      721 agcctggcca tccgtactct ctgcagcccc ctggcaggcg ccctccatat cctgcttgtt
      781 tttctcatta gtaaactcct cttctgaagg aaactggggg aaacaaatct ccaacctcca
      841 gggcatcctc ccgagctcaa acatacatga atgaaggttt catgtcctca gtctgcaact
      901 ccaccacctc ggaccacaga cctgagacac tagtgcgttt gagggacaca aacatttgcc
      961 tggatctttc aggccacaaa ttctgctttt tgtaaatact tagtccatcc tgcttgtaac
     1021 ctgaagttct gactctcagg ttaacatgtt aacagccaat ctgaacttgc gtttcttgcc
     1081 aaagtattcc catgagcctc ctgggtttgg gggtggggag gggaatatcc ttcattcaag
     1141 ctgatttcag atttctggcc aaacctactc aggttacaaa ggacttatgt gactgaagga
     1201 aaaagagaaa tgagtgatag tcctgtggct actagcacat tcccaccatg cccagaccag
     1261 tcagtaggtt tcaaagagag aaaatatatg aaaactatgc ctcagaagtc aatgacagga
     1321 cacatgactt ttttttccta agtcaaataa atggtatatt gaacaaga
//
