LOCUS       NM_001134613            2530 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus pleckstrin homology domain containing S1
            (Plekhs1), mRNA.
ACCESSION   NM_001134613 XM_574694 XR_008090
VERSION     NM_001134613.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Kotoh,J., Sasaki,D., Matsumoto,K. and Maeda,A.
  TITLE     Plekhs1 and Prdx3 are candidate genes responsible for mild
            hyperglycemia associated with obesity in a new animal model of
            F344-fa-nidd6 rat
  JOURNAL   J Vet Med Sci 78 (11), 1683-1691 (2016)
   PUBMED   27523322
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473986.1.
            
            On or before Sep 4, 2008 this sequence version replaced
            XR_008090.1, XM_574694.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760389, SAMEA5760476
                              [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q55"
     gene            1..2530
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /note="pleckstrin homology domain containing S1"
                     /db_xref="GeneID:499377"
                     /db_xref="RGD:1559884"
     exon            1..42
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            43..88
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     CDS             61..1470
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /note="pleckstrin homology domain containing, family S
                     member 1"
                     /codon_start=1
                     /product="pleckstrin homology domain-containing family S
                     member 1"
                     /protein_id="NP_001128085.1"
                     /db_xref="GeneID:499377"
                     /db_xref="RGD:1559884"
                     /translation="MEARPPKGPGKQFTFDYENEVHKRDYFIKSPPPQLFFSATSWKK
                     RLFILSQSQGKGLSLSYYKDHHRRGSIEIDGSATVEVGINSQEKMQSVQKMFKCHPDE
                     VMCIRTVTRDYFLIGRDREKIKDWVSFMTPYCRGVKATHQRAEEKPSLGDRRPVSDPS
                     PFLGLCNIPEGISLASPRASLPEHLIQKSLQRFRQDHYHHEHDFYSEPTQDAEEEEYY
                     LTPRSLENIDGANDSGDSAESNSPDQGFKRAESNYVSMRSMRSCLVKEATSAPADCQA
                     EFQISPETSELGPPHQEQDTGSDPCLLPADSEAQTTDDQQGSASLTVVKLSILLNNIT
                     DESQVETLNVFLSPRDVINYLALVEAAGRICVARWEGPPRLGCLFHHGDHILAVNDLK
                     PQSLEEVSLFLTRCIQKEKVKLSIGRIPNSEKLHAFPCACSLRHQFAESAQQDLPGRE
                     RTPKRSPAIKKNQKEAIGE"
     exon            89..177
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            178..284
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            285..419
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            420..495
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            496..609
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            610..729
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            730..845
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            846..1052
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            1053..1154
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            1155..1290
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
     exon            1291..2530
                     /gene="Plekhs1"
                     /gene_synonym="RGD1559884"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggaggagtt ccagagccga gttactgccg tccggagacc tggtgagaag agccagccag
       61 atggaagcca gacctccaaa gggcccaggc aaacaattta catttgatta tgaaaatgaa
      121 gtccataaac gagattactt cattaagtca ccaccccctc agctcttctt ctcagcaacc
      181 tcctggaaaa agcgtctttt tattctgtcc cagagtcagg ggaagggtct tagtctttca
      241 tattacaaag accatcaccg tcgaggttcc atcgaaatcg atggcagcgc cactgtagag
      301 gtcggtataa atagccagga aaagatgcaa tctgtgcaga agatgttcaa atgccacccg
      361 gatgaggtga tgtgcatcag aaccgtaacc agggactact tccttattgg ccgagacagg
      421 gagaagatta aagactgggt ctccttcatg acaccatact gccggggtgt aaaagcaacc
      481 catcagagag cagaggagaa gccttccctg ggtgacagaa ggccagtttc tgaccccagt
      541 cctttcttgg gtctctgcaa cataccagag ggtatcagcc ttgcatcacc gagggccagt
      601 cttccagagc atttaataca aaaaagtctc caaagattca ggcaagatca ttaccatcat
      661 gaacatgatt tctactcaga accaactcaa gatgcagaag aggaggaata ctacctcact
      721 cctcgaagct tagagaatat tgatggagcc aatgattctg gtgactccgc tgaatccaat
      781 agcccagacc aaggtttcaa gagagctgag agcaattacg tgtcaatgag atcaatgaga
      841 tcctgtctag ttaaagaagc aacctctgca ccagccgact gccaagccga attccagatt
      901 tctcccgaga cgtcagagct ggggcctcca catcaagaac aagacacagg aagcgatcct
      961 tgtcttctgc ctgctgattc agaagcacaa accacagatg accaacaggg gtccgcctca
     1021 ctaactgttg tgaaattgtc tatactgctc aacaacatca cggatgagag ccaggtggag
     1081 actctgaatg tgttcctctc tcctcgggat gtcatcaact atctcgctct ggtggaagca
     1141 gcaggacgga tatgtgtggc tcgctgggaa ggccctcccc gactagggtg cttattccac
     1201 catggagatc acatcttggc tgtgaatgac ctgaagcccc aaagcctgga ggaggtgtcc
     1261 ctgtttctta cccgatgtat ccagaaagag aaagtgaaac tctccattgg ccggatccca
     1321 aattcagaga agctccatgc tttcccctgt gcgtgctcct taagacacca gtttgctgag
     1381 tctgcccagc aggatctgcc aggccgggag aggacaccaa agaggagtcc tgccatcaaa
     1441 aagaaccaga aggaagctat tggagagtag gctgccacag gcccgggaca cgaaggttgg
     1501 agccctgggg catgcacggc cctgtgattg gagacaagac agcatccttc tctgagccac
     1561 tgtgctgact taacggtggg gtcactggcc ctcttaggct ttttcgttgg gaaagtcaca
     1621 tgggactaag gaatagagtt agaacaggag ggcttattat ctgagactct gccccagatg
     1681 tggcagacac cgtatcagta aatccctggt gtaattaata gctgtgtgct tctgaggtca
     1741 cagtccacac cactgcctct acgtcagtca gccatatcat ttcagggatg caagagagtg
     1801 aaagtctgta tcagtcctcc aggacgcttc ccatcaggca agctgagtgg cctctctgtc
     1861 tcactcagta cacctgctct cttaaagata cactaactgg gggctgggga tttagctcag
     1921 tggtagagcg cttacctagg aagcgcaagg ccctgggttc ggtccccagc tccaaaaaaa
     1981 aaaaagcgtt aaaaaagata cactacacta actgtttggg aagcttggcg ctgtatccag
     2041 ccaagatgcg cttgctctaa aaataaatgg gaaactatgt ttgggcactc ttaattgatt
     2101 ggtttattgc caaatcaatt ctgcaaagcc gaaagaatca aaggcctttt agcaatcagg
     2161 gaaaaggagc agcgatcagc ctaacgctaa tcagcctggg gactgtgggt gcgaaggggg
     2221 atttagaaac tgcatcttag caggctgtcc tctcggggaa gaaatggagg ctttgaagga
     2281 ccgtgatgct cagtcgtcct gactcagtgt tctggagcgg ttccgggtca gaaccacaaa
     2341 tccgatacca gctttagaaa gaaaactctc tgaccttcgc cttgtgtgtg ggtttaggtt
     2401 agtaaagacc ttcggcaagc agaggagaca ttgaatgcac ttcagttcct gttacctaga
     2461 ttactgccag tgtaaaacgt gtatgtctac ataaaacagg gaaaagaaat acatgtgcat
     2521 gtatgactgt
//
