LOCUS       XM_039084587            9163 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus pleckstrin homology domain containing
            M3 (Plekhm3), transcript variant X5, mRNA.
ACCESSION   XM_039084587
VERSION     XM_039084587.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9163
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..9163
                     /gene="Plekhm3"
                     /note="pleckstrin homology domain containing M3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 30 ESTs, 3 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:316455"
                     /db_xref="RGD:1307151"
     CDS             1051..3336
                     /gene="Plekhm3"
                     /codon_start=1
                     /product="pleckstrin homology domain-containing family M
                     member 3 isoform X1"
                     /protein_id="XP_038940515.1"
                     /db_xref="GeneID:316455"
                     /db_xref="RGD:1307151"
                     /translation="MEALEVDDISPALEVTEDFFSTFDSKLGKAVQQAEVYGVQEVPE
                     LVGHEVLGNITDNGALRSVASLGKGTMIWDHCKSRLLETKAQNVFPAKEQLMVQRGTA
                     PDNLSWMEQKEASTFNFFNICQRRRDRPRSVNDLLDETTTFKPGHARSRSDVTHVDWR
                     VVLSTMPLQQQQQQQQASLHGPHFPRPSFLLSSSNKVEDAQGNTEHKQTFPNILKKGY
                     LEIRKNHDSYWQSCYAELSPYNLNFYSLDSSGNQNLYATYQLSHFQSISVLGNLEARM
                     VDTVLYDNSQLQLKAESPWEALDWGQKLWEVVHAAVPNYMARQEEKANSPGLGHHVDC
                     AQNHCLQKKSSGLLASPVLDSPKQYQNILKSGTLYRLTVQNNWKAFTFVLSKAYLMAF
                     HPGKLDEDPLLSYNVDVCLAVQTDNLDGCDSCFQVIFPQDVLRLRAETRQRAQEWMEA
                     LKTAANAARSSEQNLQVTLRNKPKDQLGGHELRKNKRQSVTTSFLSILTTLSLERGLT
                     AQSFKCAGCQRPIGLSNGKAKVCNYSGWYYCSSCHVDDSFLIPARIVHNWDTSKYKVS
                     KQAKEFLEYVYEEPLIDIQQENPMLYLHAEPLATVARLRQRLKSLRAYLFSCRAAVAE
                     DLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKVIKFATAHVYSCSLCSQKGF
                     ICEICNNGEILYPFEDISTSRCESCGSVFHSECKEKSVPCPRCVRRELQKKQKSFWRQ
                     LNVDESLEEACTMFELSYQNT"
ORIGIN      
        1 gctgccgcgg ggaagcattt gggcgtggga ccgcgagaag ccgcttgtaa acagaaccgg
       61 gccgggatgg ttggcggccg gagcgcagcc gctggcggtg aggagggcgg gctgcctggg
      121 tcggggtcct gctgggggtt gactgcaggc cgcacgggcg acaggaccaa agccgcgtgg
      181 ctcctggccg tttgctggct tgtgtcatag cagatgttca ccccttggaa gaaaagatct
      241 ctgagcctgg aggggagggg tttgatgaag acatcccatc tagggttgac tgctccaaaa
      301 atctctctct ttgcctgctg tccaggtttg ggtctctgtg ttaattccac tctactgcaa
      361 atggaagcct ggagtagtgc actgatctga acctatgcaa actgtcctgt taaatcctgc
      421 agcgagtgaa ccccgccacg ccaaggccac tgagaagcgg gcagagcagc cgctgctgcc
      481 tttaactctg cagaaggagt gcttgggtgc attaagactt tctatccgag cttcctaagc
      541 agatcccgtc atcatccttt ctgcagttgc tgggtgtaaa agagaagatc aaagagaaag
      601 taggaatctt ttccatggtg tagataccca gggcatcctg taccctggta ggggttcata
      661 aagaacagca ttctgttgtt tgatttgcat ccccaaacca cctttgcatg tacaacaggg
      721 atttttattt gccctgtgtg ttgacaaagt agctcaagaa gattgcccca aatcatactc
      781 cgggaacagt gcgtagaaaa cggagaccca tgccttcaac tttaaaccct gtagcccgag
      841 aagttgaaga ttggcgttac attgctttgg caaacagtgc cctgctgtct tcaccgagat
      901 ctctaacaag cccctgtgct tctccaggca gccagatgaa gattgcttcc tctcgtctcc
      961 acagctgcgc tgccgaatca cctctctctg tcggctgagt gctcatgacg ccttttcctt
     1021 gaagcagttt agaagcgtgg accctgtgtc atggaagctt tggaggtaga tgacatcagc
     1081 cccgccttag aggtcactga ggacttcttc agtacttttg acagtaagct gggaaaggct
     1141 gtacagcagg cagaggtcta tggggtccag gaagtccctg aactggtggg gcacgaggta
     1201 cttggtaaca taacagacaa tggtgctttg cgaagcgtcg cttccctggg caaggggaca
     1261 atgatttggg accactgtaa gagcaggctc ctagaaacca aagctcaaaa tgtcttccct
     1321 gccaaagaac agcttatggt ccagagaggg acagccccag acaatctttc ctggatggaa
     1381 cagaaggaag catcaacctt caacttcttc aacatttgtc agcgtcggag ggacagacct
     1441 cgctctgtga atgacttatt ggacgagacc acgactttca agccaggaca tgctcggtca
     1501 aggtccgatg ttacccatgt tgactggcgg gtagtcctga gcaccatgcc tttgcagcaa
     1561 cagcagcagc agcagcaggc gtcccttcac ggccctcact tccccaggcc gtcttttctg
     1621 ttgtcttcat ccaataaggt tgaagatgct caaggaaata cagaacacaa gcagacattc
     1681 ccaaacatac tgaagaaggg ttatctggag atcaggaaga accatgacag ttactggcaa
     1741 agctgttatg cagaactctc accctacaac ttaaacttct acagcctcga tagcagtggg
     1801 aatcagaacc tttatgccac gtaccagctt tcccacttcc agagcatatc tgttttaggc
     1861 aatctggagg ccaggatggt agacactgtt ctctacgaca attctcagct gcagctaaag
     1921 gcagagtccc cgtgggaggc gttggactgg gggcagaagc tctgggaagt tgtacatgct
     1981 gctgtgccca attacatggc acggcaggag gagaaggcaa actctccagg acttggtcat
     2041 catgttgact gtgcacagaa ccactgttta cagaagaaat ctagtgggct gctggcctcc
     2101 cctgtcttgg atagccccaa acagtaccaa aacatcctga aatcagggac actctacaga
     2161 ctgactgtcc agaacaactg gaaggccttt acatttgtgc tgagcaaggc ctaccttatg
     2221 gctttccacc ctggcaagct agacgaagat cccctcctga gctacaatgt agatgtgtgt
     2281 ctggctgtgc agacagacaa cctggatggt tgtgactctt gctttcaagt cattttccct
     2341 caggatgtcc tccgcctccg ggctgagacc cgacagaggg ctcaggaatg gatggaggct
     2401 ctgaagacag cagctaatgc tgcaaggagc tccgagcaaa acctgcaagt cacactgaga
     2461 aacaaaccca aggatcagct cggtggccat gaactgcgga agaacaaacg ccagtccgtg
     2521 accaccagct tcctgagcat cctgactacg ctgtctttgg agcgaggact cactgctcag
     2581 agtttcaaat gtgcagggtg ccagcgaccc attggtctgt ccaatggcaa ggccaaggtg
     2641 tgcaattaca gtgggtggta ctactgcagc agctgccacg tggacgacag ctttctcatc
     2701 ccagcacgca tagtccacaa ctgggacacc tcaaaataca aggtgtccaa acaggccaag
     2761 gagtttctgg agtacgtgta cgaagagccc ctgatcgaca tccagcagga gaacccaatg
     2821 ctctacctcc atgctgagcc tctggccacc gttgcacggc tgcggcagcg gctgaagtca
     2881 ctccgagcct atttgttcag ctgcagggcg gcagtggcgg aggatctgcg ccgcagaatt
     2941 ttccccagag aatacctcct tcagcagatc cacctgtact ctctcgctga cctgcagcag
     3001 gtgatagagg gaaagctggc tccgttcttg ggcaaggtca ttaaattcgc caccgcacac
     3061 gtctacagct gcagtctctg tagccagaaa ggcttcatct gtgaaatctg taacaatggc
     3121 gagatcctct accccttcga ggacatttca acaagcagat gcgaaagctg tggatctgtc
     3181 ttccattccg agtgcaaaga aaagtctgtc ccctgcccac ggtgtgtccg acgggagctg
     3241 cagaagaagc agaagtcctt ctggcggcag ctgaatgtgg atgaaagcct ggaggaagcc
     3301 tgcaccatgt tcgagctgtc ctaccaaaac acctgactga ctgcaggcca ggctacgcga
     3361 accacaacta cccaaggggc tgcccatgcc cgtgcacagg aggctgtccc ttcttcagct
     3421 agatgtagat agataagtta tttatttata ttatatacac ctatacgtcc tgtacgtatg
     3481 ctctgtataa ctcattgtcc aaaaagtcca caaagatcct gtggctgaac tcctacagat
     3541 agctgaggta cacttggcca tgaaattcag ctgcttgctc ccagcaaatg ggattgacac
     3601 acattgctct gtagttcaga ccctttacgc acactggctt atctaaggcc agtctactgc
     3661 acaggcgttg gaggaagcct ctctcgcagc aaagctttgc tggggaaact gaggtaagag
     3721 ccactgtcat ctgcttcaca aggccgtctc tggaacacaa gactgtttct ggatacttcc
     3781 aggccccagg gtccttggca gagtgggaag agtgaagcag agccacacct cttcctccaa
     3841 tagaaagcag tgggagcaga gctcccctgg gtttgaacgt aatccctgaa agtgagaatg
     3901 aaagtgagga cctctgtggc caatcactgc acgtcctccg tcctttggct ggtacaaagc
     3961 caggcacctc ccttctgatg agactccaca atgcctgcca gagagtgctc acgggcacct
     4021 aggaacagtt ctccaagcag agcatggagg acattggtca ggttttccat ggtgctgccc
     4081 agggggaaat gttccaggat tgcgctcaag catatcagtg catagcctgc taggtagagt
     4141 ctactgcacg catcttggag gacacgatac ttcctttccc agagtcctcc atcagcagtg
     4201 cccacctgtc atttgatgtt ttatttctcc ttctccttcg cagcactttt gactgttact
     4261 cagtccacat aactactctt ctttgtattc tgggtgtttt gtttgtttgg gatggggaca
     4321 tattttaaga cagggtcttg ctgtgtatcc ctggctggcc tcaaacttgt gatcctgctg
     4381 cctcatcctc caaatgctgg gattacaggt gtttgccacc atacctggct ttacttgttt
     4441 ctaattattt tttaaaaata tttaaaagta attatataat tattaaaagt tattaagtaa
     4501 cattttgaaa aatacaagcc taaactatta agaaaatacc aaacataagt agaattaata
     4561 ttattgaaat gagtagatat atacatatat aattgctatc tcacagtaac acaaagagaa
     4621 actagtatgg tgggaatgag atgtgaatca cttcgctctt tggagggtac tgaactccca
     4681 ctgtgatccc cttgtaagag cctgtgtagt tgtcactgat ggctgctagg aaggcactga
     4741 gaccttgatg gccagcatcc cttctacctt aactcttccc acggcgggaa aatgtgctca
     4801 ccaggaagta cttgtttgtg tctttcacat ggagtcagtg tcgcccattg ccacccatgc
     4861 ttctgtcctt ttggattttc actgctgttc agacctgggg gaaacaccgg ctcacaaaga
     4921 acatggtgtt tcaattccaa gttgctccca cgggcaccag ctcttgatgc ttctgtccag
     4981 taggagacat tcagctgact tgtgcagtta caggcaagca tttcacctct tggcccacac
     5041 catttccgtt ggccccagac cacacagttc aacaccacac gtgcgttcat ttcctagcta
     5101 cccagaaacc atagccgagg catgaaactt ggtaaaaggc cagggcccta tttaccagac
     5161 acctcacggt gccttttata aacttgggaa ggcaggttga caccagctca ctggagtgag
     5221 tggtagggaa tgttgcacat aaaggacaag ggtgggaagt ctcaaatact tggcaaacag
     5281 gcaaacagat ttgagtatct ctcttcctcc tctcgttagt gaaatacagt atttatattt
     5341 tccagcctca gagaagagaa cagaacatga tctttcactg gagaattcta gacctgctta
     5401 ttatgaaaca gatgtgctcc tgtggcacag tgccttctct ctccaccccc agtccccatc
     5461 accgtagctt tgacctttgc tgaaattact gtatctgtgg ttctgactgt cagagacgcc
     5521 attcccaaca caccaagcac agagacctga agaacagagc ccccacccca ggttcgcccc
     5581 atgtcctgcc ccaactcaca ggtgcccaag attagaccta ataaaaaccg agggtgaaat
     5641 ctggatccct gctcaacata cctgagttgt ccccactgcc ccttagaggg ccctgctgtg
     5701 tgtagcagac ctttccctgg acattgcttt ctgtttattt tttaagggaa aaagataaac
     5761 gcactgtcat tcacagtctg gaactggagc ggtgtcctgc tacttctgtt ttcactctgt
     5821 catacatccc catagcctgg cccacaccag ctctggccca caatagcgat ctctgccacc
     5881 accaccagaa tctgatagga caccgtggag ccagctctag agttgaatct gccatgaaaa
     5941 ttcaaaattg ctattttcag cccagaatgc cttagagtgc atgaaggcct ttactgtttt
     6001 caggtctaac aaattacttg gtacagtgtt aggtaattgt tccactgctt agaaaccatt
     6061 gagacaaaag caagcctgtg gatttccacc tccttttttt catctcagta aatatcagac
     6121 acgtaaagca tagtgggaaa tggtccatta atctcctaga gctgctagca gagcccaggg
     6181 aaccgctttt cactaaacag cccattccct ggtgtgcaca ggaattccct cctgctaatg
     6241 ccagaaactc acgtgtgaca tcgtccagcc tgggggaagt attggcaccc aaccccaccg
     6301 ttgagaagcc agttcctaaa atagacctgc gtttgcactg caggaggaag gccgcagggt
     6361 gctcgaaagg cagtcagcta caatggcagc agagttcttt ccagggctgg ctgttcccaa
     6421 agttggaagc agccttgtag gaaaaccata taaactctct gtcttcccct tgacttcatg
     6481 tgctgaataa cagtcatctt ttgggagttt ttacattcga tgagctgaaa ggttaactgc
     6541 ttcttgattc ttctataata ggcctgtacc agagagagag agagagagag agagagagag
     6601 agagaaacag tgccttggga ttcacaggtt ccagtacagt ctgaaatagc ccagtgttgt
     6661 gattcccctc agctgcccta aacaaaggtg tctgtgtcac tccgtcactg tggctgagct
     6721 gcagcacacc ctcggtgagg tctggcctct gtctctgctt gtcatgtgtg cacactgaac
     6781 gtgagcactg acaggttgct ttctgcacct cctctaggag gcttggcttc cagccctgca
     6841 aatttattct ctctctgtgg accagaaaac tccagataca aacgccctat gagagcagga
     6901 ccacggtgat gccacacaca cactgagcac caacagcaaa gcccgctgcc atcgaggaag
     6961 tagacacaca ttccgctgct agctcagggg cgagccctga cctctcgccc tgcagatcag
     7021 ccctctgtgc tctcccatgc attgttgaaa cagccagatt aggaactagt ctttgaccct
     7081 tggctggaat actgcctggt tccaacacag acttttattt tattgtttgt tctttcttgt
     7141 ggtaaataga gaagtgtgca attttgtttt gggggttttc tacactactt ttcatcttct
     7201 gaaaggatgt ggagatatca ggaatttgag acagggggaa gaagctagcc ctttcttcct
     7261 tggccacttt ctccctggag ccactgtcct ttctccttat ccatcctttg gtacgactga
     7321 ctcagcagtg gtgggcatta ggaacttggt tcactgctct gcccttccca cttgccccca
     7381 gatactacaa gctacatgac taagcccctc agctaaccta aacaatgctg gtctctgtca
     7441 cagagacagc ttcttaacag ttaactctca gcacccagta gtctctctct gtaggcactt
     7501 ctgtcctctc tttggattca aaactctctg actcaagaac ttttttctgg tatattttag
     7561 tgggcgcagg actaagatac aaactctaca tcactgtaaa actctaggtg agagaaaaat
     7621 gtagatgagc ctgtccagca tttgtcagca tgttttatgt aagatgggtt cctggtgacc
     7681 gtggcatgta gcactgtctc cataaagtag gctctgctgt gatgggaggc actggtgagt
     7741 gggacccagg ctgctctgct ggggctccgc tctgagggaa aagaggtact ggctgctcgc
     7801 cattttagaa agctccctgg tgaagccgct tgtttccctg gccagatgaa caagacacct
     7861 gcagcagctt ttccacagtt gggtctctct ggctggccat ggagactgca caccagccct
     7921 ccctcccttg actccctcgc ctgcttcctc agccctaggc cagacttggg cctcatgcta
     7981 agaagccacc tagtgaacaa ctggccagtg gcccttcctc cccactgttg tgtttccctg
     8041 taggagtgcc ttatagtcta gtctagtccc tgacccactt gaagtctgca ggacccctca
     8101 gccaactatg gctcccttca cattcccctg ctggctcctc ttcagcacac agtccaccca
     8161 gagcctgtgt attctgagac gcaagtcaga ccttccacct tcgcttaacc cggtgcctta
     8221 acttcacaag caaagggatt cacattgcaa acgtgttatc tgagtgagac atcaggttct
     8281 tcggtgccat tggcactttt accaggaact acaataggca taatcataca atgttttgac
     8341 cttattttta tgatgtttct tagccactct ttgtttgctt gctttcatta accaaactca
     8401 ggagaatgtc atatcaccaa ggtcaatggg gaaagaaagg aaactagcta cccagaattg
     8461 aatgtcaaag cctatgaact aagtctttat taggttcaaa agtgacacca acacaaggat
     8521 tttttccctt cactgtataa agattctctt tacttgccac ccgtgttcca catgggaggt
     8581 gggaagcctc ggggatgctc aaggatgaca gcgtccccat ggcatccctg agcagtccac
     8641 ccagccacct gatcaggcac tcacaggctc tgcccgtggt cagctgtcag gctcggctgt
     8701 aaacagtgct tagccggctc cagggaatgg taaaggagga gaacaccaga gcgcaggtga
     8761 aaagcaagag tgtggtggtg tggatgggtc ctgtacggct cgttctcagg cgcctggatc
     8821 agatccgaga cgattcccct gctgctcatt cggtacagag gcaattagga ttctgcattt
     8881 gagctgctcc ttcgctctgt tagtcattcg taatagctaa tgtgctagtc catgtggtcc
     8941 ctgttgcctg tatttggttg ccttttggtt aatttatcca tatttttgtt tacattattt
     9001 ttaagctagt aactgtaata gtgtaaaatc gaagttgtgc tgttgatggg acatcctggt
     9061 gtttccgtgg tttttttaca gttgtctgtc acataattta agtgctccta ttcctaatgt
     9121 ataaagttct tccctctcaa taaatgacaa tggaagcacc ttc
//
