LOCUS       NM_001037202            3001 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus pleckstrin homology, MyTH4 and FERM domain
            containing H3 (Plekhh3), mRNA.
ACCESSION   NM_001037202 XM_340909
VERSION     NM_001037202.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3001)
  AUTHORS   Bohm,D., Keller,K., Pieter,J., Boehm,N., Wolters,D., Siggelkow,W.,
            Lebrecht,A., Schmidt,M., Kolbl,H., Pfeiffer,N. and Grus,F.H.
  TITLE     Comparison of tear protein levels in breast cancer patients and
            healthy controls using a de novo proteomic approach
  JOURNAL   Oncol Rep 28 (2), 429-438 (2012)
   PUBMED   22664934
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC107561.1.
            
            On Nov 18, 2005 this sequence version replaced XM_340909.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC107561.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..3001
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /note="pleckstrin homology, MyTH4 and FERM domain
                     containing H3"
                     /db_xref="GeneID:360634"
                     /db_xref="RGD:1304854"
     exon            1..577
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     CDS             416..2791
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /note="pleckstrin homology domain-containing family H
                     member 3; PH domain-containing family H member 3;
                     pleckstrin homology domain containing, family H (with
                     MyTH4 domain) member 3"
                     /codon_start=1
                     /product="pleckstrin homology domain-containing family H
                     member 3 precursor"
                     /protein_id="NP_001032279.1"
                     /db_xref="GeneID:360634"
                     /db_xref="RGD:1304854"
                     /translation="MPLPGGLWWLLCCRRGFTLLHRDYGDGELSGDGDEDEDDETFEL
                     RSPSPAGGGRGSLDVTLTQPTRNGPITDRLQSWEETWSLIPDKGLPEDDPDVIVKGWL
                     YREPRGGGARPWLLPRRAWFVLTRDSLDQFSSSGKGARRLGSLVLTSLCSVTGPERRP
                     KETGLWSVTVSGRKHSIRLCSPRQAEAERWGVALREVIASKAPLETPTQLLLRDIQES
                     GGDPEAVALIYRRNPILRHTSSALYAPLLPLPYEVSAPGPGYAPLREEAVRLFLALQA
                     LEGARRPGPLMQGVLQTCRDLPALQDELFLQLAKQTSGPAGPPGLPATQDPAALRYWQ
                     LLTCMSCTFRPGGAVRGHLLGHLERTEQALPDSELAEYARFIRKALGRTRGRELVPSL
                     AEISALSRRQELLCTVHCPGAGACPVSIDSHTTAGEVARELVGRLGLARSRNAFALYE
                     QRGAQERALAGGTLVADVLTSLTSEEVGLEDSPDSGWRLCLRLHGPLHPEGLSPEGHE
                     LPFLFEQAHALLLRGRPPPPDDTLRALAALRLQSLHRDFSPRGPLPLLDRLMPPPAPP
                     REQPSRPARRPPPSAALLAGALWSPGLAKRRAERARRIGTGRSTESTAQVGGGGGGST
                     TAAVLGGWKRLRGMGQAEAMAAYLALAAQCPGFGAARYDVLELSTEPGGGAPQKLCLG
                     LGAKAMSLSRPGESEPIHSVSYGHVAACQLIGPHTLALRVGDSQLLLQSPQVEEIMEL
                     VNAYLANPSPERPCSSSGPPSQDLSDTSPPSQHQVLEKPQGQSGCLRQLQD"
     exon            578..633
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            634..713
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            714..905
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            906..1063
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            1064..1184
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            1185..1491
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            1492..1699
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            1700..1827
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            1828..1960
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            1961..2422
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            2423..2614
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
     exon            2615..2989
                     /gene="Plekhh3"
                     /gene_synonym="RGD1304854"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggagcgcag cgcgcgccgc ccgggccccg gccaccggac gccctaccgg acaccaccct
       61 ccttggagct tggacaaccg cccaccacga ttgctgcacc aggcacttct cctacagggc
      121 tggacactac aacgaacact acttcccagc tccggacatt gctccccgct cccttctccc
      181 ggccctggac actaatcccc cctcctctgc ccgggcccaa acatcgagcc cccaacgggt
      241 tctggtggta gttctcttgc acctcagtgc tggacactgc ctccttccgg cccccttctt
      301 tcctctcatc gcacctcatc tctaccgagt tctggtcgga gcaccttcag tttctcagat
      361 tccctgctgc tccggcaacg ctgcccgcgc ccccattccc aggctgctcg cccggatgcc
      421 tctccccggg ggattgtggt ggcttctttg ctgccgtcga ggcttcactc ttctgcaccg
      481 ggactacggg gacggcgagc ttagcgggga cggggacgaa gacgaggacg acgagacctt
      541 tgagctaagg agcccgagtc cagcgggcgg cgggaggggt tccctggacg ttacactgac
      601 tcagccaaca aggaacgggc ccatcacaga cagactgcag agctgggaag agacctggag
      661 cctcatccca gacaagggac ttccggagga cgaccctgac gtcattgtga aaggttggct
      721 gtaccgggag ccccgtggag gaggggcacg gccatggttg ctcccacgca gagcttggtt
      781 tgtgctcacc agagattccc tagaccagtt cagcagcagc gggaaagggg caaggcgtct
      841 cggaagtctg gtcctcacaa gcctgtgctc agtgactggg ccggaacgta ggcccaaaga
      901 gaccggtctg tggtcagtca ctgtgtctgg ccggaaacat agcatccgcc tctgctcccc
      961 acgccaggca gaggcagagc gctggggggt agcactgcgt gaggtgattg cctccaaggc
     1021 tccactggag acccctaccc aactactgct cagggacata caggagagcg gtggggaccc
     1081 agaagcagtg gcccttatct accggcggaa ccctattctg aggcacacca gtagtgcctt
     1141 gtatgcccca ctcttgcccc tgccttatga agtcagtgct ccaggtccag gttatgcacc
     1201 cttacgagag gaggcagtga ggctgttcct ggcactgcag gcgctggagg gggcacggcg
     1261 ccctgggccc ctgatgcagg gtgtgctcca gacctgccgg gacctgcctg cactccagga
     1321 cgaacttttc ctgcagctgg ctaagcagac ctctggtcct gccggtcccc ctgggctccc
     1381 tgctactcaa gatcctgcag ccttgcgata ctggcagctt ctcacttgca tgagctgtac
     1441 ctttcggccc gggggagctg tccgagggca cctcctgggg catttggaga ggacggagca
     1501 ggcactccca gactcagaac tggcagaata tgcacgcttc attcggaaag ccctgggccg
     1561 tactcggggc cgagagctgg tgccttcgtt agcagagatt tctgcactga gcagaaggca
     1621 agagctgttg tgtaccgtac actgtcccgg agctggagcc tgtcctgtgt ccatcgattc
     1681 ccacactacg gcgggagagg tggctcgaga gttggtgggt agactaggtt tggcccggag
     1741 ccggaacgca ttcgctttgt atgagcagcg aggggcccag gagcgagccc tggctggcgg
     1801 gactcttgtg gccgacgtgc tcaccagttt gacctcagag gaagtcggac tggaggactc
     1861 gcccgactcc gggtggaggc tgtgtcttcg ccttcacgga cctctgcacc cagaagggct
     1921 atctccagag ggtcacgaat tgcctttcct ctttgagcag gcgcacgcac tgctgctgcg
     1981 cggccggccg cccccacccg atgacacact gcgcgccctg gcggcgctgc gcctgcagag
     2041 tttgcaccgc gacttttccc cacggggtcc cctgccgctc ctggaccgtc taatgccgcc
     2101 ccccgccccg ccgcgggaac aaccgtcgcg ccctgcccgg aggccaccgc cctccgccgc
     2161 cctgctggcc ggggcgctct ggagccctgg cctggccaag aggcgggcgg agcgtgcccg
     2221 gcgcatcggg acgggccgct cgacggaaag cacagcccag gtgggaggag gaggcggcgg
     2281 cagcacgacg gctgcggtgc tgggaggctg gaagcggctg cggggcatgg gccaagctga
     2341 ggctatggct gcctacctgg ctctggcggc gcagtgtccg gggttcggcg ctgctcggta
     2401 tgacgttctg gagctgagca cggagcctgg tggaggtgct ccacagaagc tctgccttgg
     2461 tctgggagca aaggccatgt cgctctccag gcctggtgaa tcagaaccca tccacagtgt
     2521 cagctatggt catgtggccg cctgccagct aataggccct cacaccttag cgctgagggt
     2581 gggtgacagc cagctcctcc tgcagagtcc ccaggtggaa gagatcatgg agctcgtgaa
     2641 tgcctacttg gccaacccct cccctgagag gccctgcagc agctctggtc ctccaagcca
     2701 agacctgtcg gacacctccc ctcccagcca gcaccaagtt ctggaaaagc cccagggaca
     2761 gtctggctgc ttgaggcagc tgcaggacta agtctgccaa gaggtcagga cttttctttt
     2821 gcctccagcc tgagaccggg agtgctccga gatctgaggc aaccatggac cctttttggc
     2881 cctgcaggga cagggtacac ccacaccaga gggcagcaat gggtgtggac agttttctag
     2941 tttgtttctt aatttatttg tagaagaaaa aaatcgctat ttacacaaaa aaaaaaaaaa
     3001 a
//
