LOCUS       NM_001190999            4390 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus pleckstrin homology and RhoGEF domain containing
            G1 (Plekhg1), mRNA.
ACCESSION   NM_001190999 XM_001054556
VERSION     NM_001190999.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4390)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001190999.2.
            
            On Jul 9, 2010 this sequence version replaced XM_001054556.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.2146969.1,
                                           SRR26643285.394.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-408               JAXUCZ010000001.1  42754740-42755147
            409-509             JAXUCZ010000001.1  42779787-42779887
            510-579             JAXUCZ010000001.1  42793721-42793790
            580-626             JAXUCZ010000001.1  42806127-42806173
            627-777             JAXUCZ010000001.1  42810344-42810494
            778-909             JAXUCZ010000001.1  42814056-42814187
            910-1092            JAXUCZ010000001.1  42816139-42816321
            1093-1188           JAXUCZ010000001.1  42816412-42816507
            1189-1275           JAXUCZ010000001.1  42816612-42816698
            1276-1309           JAXUCZ010000001.1  42822081-42822114
            1310-1393           JAXUCZ010000001.1  42822604-42822687
            1394-1432           JAXUCZ010000001.1  42824498-42824536
            1433-1455           JAXUCZ010000001.1  42826752-42826774
            1456-3091           JAXUCZ010000001.1  42830473-42832108
            3092-4390           JAXUCZ010000001.1  42838182-42839480
FEATURES             Location/Qualifiers
     source          1..4390
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p11"
     gene            1..4390
                     /gene="Plekhg1"
                     /note="pleckstrin homology and RhoGEF domain containing
                     G1"
                     /db_xref="GeneID:679812"
                     /db_xref="RGD:1583676"
     CDS             1..4143
                     /gene="Plekhg1"
                     /note="pleckstrin homology domain containing, family G
                     (with RhoGef domain) member 1"
                     /codon_start=1
                     /product="pleckstrin homology domain-containing family G
                     member 1"
                     /protein_id="NP_001177928.1"
                     /db_xref="GeneID:679812"
                     /db_xref="RGD:1583676"
                     /translation="MELSDSDRPISFGSTSSSASSRDSHGSFGSRMTLVSNSHLGLFH
                     QDKEAGAIKLELVPAQPFSSSELQKDNPAGPPNMDGVGEKQPRAPWRVDTNGTPQTTA
                     DSATSPKLLYVDRVVQEILETERTYVQDLKSIVEDYLACIRDQTKLPLGTEDRAALFG
                     NIQDIYHFNSELLQELENCENDPVAIAECFVSKSEEFHIYTQYCTNYPRSVAVLTECM
                     RNKMLAKFFRERQETLKHSLPLGSYLLKPVQRILKYHLLLHEIENHLDKDTEGYDVVL
                     DAIDTMQRVAWHINDMKRKHEHAVRLQEIQSLLTNWKGPDLTSYGELVLEGTFRIQRA
                     KNERTLFLLDKLLLITKKREDTFTYKAHILCGNLMLVEVIPKEPLSFSVFHYKSPKLQ
                     HTVQAKSQQEKRLWILHLKRLILENHAAKIPAKAKQAILEMDAIHHPGFCYDPKGEVK
                     TPCGSAPHRLRRKSEPSSRSHKVLKTSETAQDIQKVSREESSSQLTSAVPAQRNRQPG
                     NAAVLNMLRGGGSVRGLWMDHHIQQPFFPSRRTPQENEDDDDDYQMFVPSFSSSDLNS
                     TRLCEENTSSRPCSWHLGLIEPTEISSSGHRIVRRASSAGESNACPPEVRLRDSDGSQ
                     YCPGREMQNSPQPGGQGGMTPFGSSVELTIDDIDHVYDNISFEDLKLMVAKRDETESS
                     FSKSSRDSVRPKSTPELAFSKRQASHSTSSLHSKKETASSGQEASNQSIHEHQEVEEN
                     IYDTIGLPDPPSLNFQRSSLQQPKRSTFLGLEADFACCDSLRPFVSQDRLQFSEDDIS
                     YHQGPSDTDYLSLLYDSPRCNLPIADKTLSDKLSEEVDEIWNDLENYIKKNEDKSRDR
                     LLAAFPVSKDDVPERLYVESTQELSRDAGRATSMLALPGSQTFLTPGESRVVRASRAN
                     CSLEDDLISTEGSFLSLNQLSLVSDEPSEDNPYDLASCSLPQTDPENPDPRMEITDKT
                     KSRVFMMARQYSQKIKKVNQLLKVKSPELEQPLSSQHRPIHKDLVAILEEKRQGGPAI
                     GARIAEYSQLYDQIVFRETPLKSQKDGWTSTQEPALHRPASPPQVQGAGEDWLWHSSY
                     SNREVADFSPQTEQDSKSKYPVTLESITKIMPRQLSAACSVPSLQGSDPLLGSVQQRC
                     SVVVSQPHKENSGQGHLYNSLGRKAISAKLQPYSRPQSSSSVLINKSLDSINYPSETE
                     KKQLLSLQKSPRGASQQDLLSGLADSCQQDTGKQSDLTLQDSQKVLVVNRNLPLSAQI
                     ASQNYFSNFKETEGDEDDYVEIKSEEDEVRLDLSPRRNRKSDPKIPDPDCSDNICRHN
                     TPYSLKEPVSGRLGLPPYLTACKDSDKLNDYLWRGPSPNQQNIVQSLREKFQCLSSSS
                     FA"
     exon            1..408
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            409..509
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            510..579
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            580..626
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            627..777
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            778..909
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            910..1092
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            1093..1188
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            1189..1275
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            1276..1309
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            1310..1393
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            1394..1432
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            1433..1455
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            1456..3091
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
     exon            3092..4390
                     /gene="Plekhg1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagcttt ccgacagtga ccgacccatc agcttcggct ccacctcatc ctcggcctcc
       61 tccagggaca gccatggttc ctttggcagc agaatgactt tggtttcaaa tagccacttg
      121 ggcttatttc accaggataa agaagctggg gccataaagc tggagctggt accagcgcaa
      181 ccattttcca gcagcgagct gcagaaggac aaccccgccg ggccaccaaa catggatgga
      241 gtcggtgaga agcagcccag ggctccgtgg agagtggaca cgaacggcac accgcaaacc
      301 actgcagact cggccaccag ccccaagctc ctctatgtgg atagagttgt acaggaaatc
      361 ctggagacag agaggaccta cgtgcaagat ctaaaaagca tcgtggagga ttacctggca
      421 tgcatccggg accaaaccaa acttcccctg gggactgaag acagggcggc tctttttgga
      481 aacattcagg atatttacca cttcaatagc gaacttcttc aagagctgga aaactgtgaa
      541 aatgatcctg tggccatagc agaatgtttt gtgtccaaga gtgaagagtt ccacatttat
      601 acccagtatt gcaccaacta cccaaggtct gtggctgtgc taactgaatg catgaggaac
      661 aagatgcttg ccaagttctt ccgggagcgc caggaaactc tgaaacattc actgccccta
      721 gggtcctatc tcctgaaacc agttcaaagg attctcaaat atcatctcct tctacatgaa
      781 atagagaatc accttgataa ggatacagaa ggctatgatg ttgtgctgga tgctatagac
      841 acaatgcagc gagtggcctg gcacatcaac gacatgaaac ggaagcatga gcatgctgtc
      901 cgcttgcagg agatccagag cttgttaact aactggaagg ggccagacct taccagctat
      961 ggggagctgg ttcttgaggg aaccttccgc atccagaggg ccaaaaatga gaggacgctc
     1021 tttctcctgg acaagctgct gctcatcaca aagaagagag aggacacatt tacatacaaa
     1081 gctcacatcc tgtgtggcaa cctcatgctt gtggaggtca taccaaaaga gcctctcagc
     1141 ttcagtgtct tccactacaa gagccccaag cttcagcaca ccgttcaggc caaatcccag
     1201 caagaaaaac gcctctggat tctgcacctg aagaggctga ttctggagaa ccacgcagca
     1261 aaaatcccag ctaaggccaa gcaagcaatt cttgaaatgg atgccatcca ccatccaggc
     1321 ttctgttacg atcctaaggg agaggtgaag acaccatgtg gttcagcacc acatcggctg
     1381 aggcggaagt cagagccttc ctctcgatca cacaaagtgt tgaagaccag tgaaaccgca
     1441 caagatatcc agaaggtttc tagagaggaa agctcttccc agctaacttc tgccgtacct
     1501 gcccagagga accgccagcc cggcaacgct gcagtcctca atatgcttcg cgggggaggc
     1561 agtgttagag gcctgtggat ggatcaccac atccagcagc ccttctttcc aagccgccgg
     1621 actccacagg agaatgagga cgatgatgat gattaccaga tgttcgtccc gtccttttct
     1681 tcctcggatc tcaactccac caggttgtgt gaagagaaca cttcaagccg cccttgcagc
     1741 tggcatctgg gactgattga gcccacagag atctccagct ctggtcacag gatagtccga
     1801 cgggccagca gtgctggtga aagcaacgcc tgccctcctg aagtaagact tagggacagt
     1861 gatggctccc agtactgtcc agggagagaa atgcagaaca gtcctcaacc aggaggacag
     1921 ggagggatga ctccctttgg gtcatccgta gagttaacta ttgatgatat agaccatgtc
     1981 tatgataaca ttagttttga agacttaaag ttaatggttg ctaagcggga tgaaactgaa
     2041 tcctctttct ccaaatcatc cagagactct gttcgcccca agagcacccc agagttagcc
     2101 ttctcaaaga gacaggctag ccacagtaca agctctctcc actcaaagaa agagacagcc
     2161 tccagcggtc aagaggcatc caaccaaagc atacatgaac accaggaagt ggaagaaaac
     2221 atctatgaca ccataggtct tccagaccca ccatcgctga actttcaacg cagcagcctt
     2281 cagcagccca aacggagcac cttcctgggt ctggaagctg attttgcatg ctgtgacagc
     2341 ctgagaccat ttgtctccca ggatagactc cagttcagtg aggatgacat atcttaccac
     2401 cagggaccct cggatactga ttatttgagt ttgttatatg actctccccg ctgtaacctg
     2461 cctattgcag ataagactct gtcggacaaa ttgtctgaag aagtagatga aatctggaat
     2521 gacctggaaa attacatcaa gaaaaacgaa gacaagtcga gagaccgtct ccttgcagcc
     2581 tttccagtga gcaaagatga tgtgccagag aggctgtatg tcgagagcac ccaggagctg
     2641 agcagagatg caggacgtgc cacatctatg ctggccctgc ccggaagcca gactttcctc
     2701 acgcctgggg aaagcagggt tgtcagagct agcagggcca actgctccct ggaggatgac
     2761 cttatttcaa cagaaggctc cttcctaagt cttaaccaac tctctctggt cagtgacgag
     2821 ccttctgagg acaatcccta tgacctggcc agctgcagcc tgccccaaac agacccggaa
     2881 aaccctgacc ctaggatgga gatcacagac aagaccaaga gcagggtctt tatgatggcc
     2941 aggcagtata gtcaaaagat taagaaggta aatcagcttt tgaaagtgaa aagcccagag
     3001 ttggagcagc cactgtccag tcagcatagg cccattcaca aagatctggt ggccatcttg
     3061 gaagagaaga ggcaaggagg acctgccatt ggtgccagga tcgctgaata ttcccaactg
     3121 tatgaccaga ttgtgttcag agagacaccc cttaaatctc agaaggatgg ctggaccagc
     3181 acccaagaac ccgcactcca taggcctgca tcacctcccc aggtccaggg cgctggtgag
     3241 gactggcttt ggcattcgtc ctacagtaac agagaggtgg cagatttctc tccccagaca
     3301 gagcaagact caaaatcaaa ataccccgtc acgttagaga gcatcacaaa aattatgccc
     3361 agacagttgt ctgctgcttg ttcagtacct tctctccaag ggtcggaccc tctgctgggc
     3421 tctgtgcagc agcgatgcag cgtagtggtt agccagcccc acaaagagaa ctccggtcag
     3481 ggtcatcttt acaactcgct gggtcgcaaa gcaatcagcg ccaaactcca gccatatagt
     3541 agaccccagt catcttcctc agtcttgatc aacaaatctc tggattccat caactacccc
     3601 agtgagacag aaaagaagca actgctctct ttacaaaaaa gtcccagagg cgcgagccag
     3661 caggacttgc tgtcggggct ggcggactca tgccaacagg acacaggcaa acagtccgat
     3721 ctcacgctgc aagactcaca gaaggttctg gtggtaaata gaaatttacc cttaagcgcc
     3781 caaatcgcga gccagaacta cttttctaat ttcaaagaga ccgagggaga tgaagacgat
     3841 tatgtggaaa tcaagtcaga agaggatgaa gtgagactgg atctctctcc aaggcggaac
     3901 aggaagtctg acccaaagat cccggaccct gactgttctg ataacatctg tcgccacaac
     3961 acgccttact ctttgaaaga gccagtgagt ggcagacttg ggcttcctcc ttacctgaca
     4021 gcatgtaagg actctgataa actgaacgat tatctgtgga gggggccatc acccaatcag
     4081 caaaacattg tccaatctct gagagagaaa tttcagtgtc ttagctcaag cagcttcgcc
     4141 taggtttcta gaactgtccg aattagctcc ttagcaagtt accaatacaa atgagattgg
     4201 ttttgctgta ttttttttaa atatatgcca gtttaaaaca attttgtaat aacaagaggg
     4261 taaatgtgct ttcctttata gcacaactct ttgagtggct gaccatgaca attacccctc
     4321 cacatcctga cagtagcacc cacttttaga ataccttctc cccacatccc aaggagttct
     4381 atactgtgac
//
