LOCUS       NM_001108655            2851 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus pleckstrin homology and FYVE domain containing 2
            (Plekhf2), mRNA.
ACCESSION   NM_001108655 XM_001072203 XM_342803
VERSION     NM_001108655.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473984.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001072203.1, XM_342803.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161902.1, DY317346.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q13"
     gene            1..2851
                     /gene="Plekhf2"
                     /note="pleckstrin homology and FYVE domain containing 2"
                     /db_xref="GeneID:362484"
                     /db_xref="RGD:1312029"
     exon            1..232
                     /gene="Plekhf2"
                     /inference="alignment:Splign:2.1.0"
     exon            233..2851
                     /gene="Plekhf2"
                     /inference="alignment:Splign:2.1.0"
     CDS             247..996
                     /gene="Plekhf2"
                     /note="pleckstrin homology domain containing, family F
                     (with FYVE domain) member 2"
                     /codon_start=1
                     /product="pleckstrin homology domain-containing family F
                     member 2"
                     /protein_id="NP_001102125.1"
                     /db_xref="GeneID:362484"
                     /db_xref="RGD:1312029"
                     /translation="MVDRLANSEANTRRISIVESCFGAAGQPLTIPGRVLIGEGVLTK
                     LCRKKPKARQFFLFNDILVYGNIVIQKKKYNKQHIIPLENVTIDSIKDEGELRNGWLI
                     KTPTKSFAVYAATATEKSEWMNHINKCVSDLLSKSGKTPSNEHAAVWVPDSEATVCMR
                     CQKAKFTPVNRRHHCRKCGFVVCGPCSEKRFLLPSQSSKPVRICDFCYDLLSTGDMAA
                     CQPTRSDSYSQSLKSPLNDASDDDDDDDSSD"
ORIGIN      
        1 agtgcgcgcg caggagggaa gccagcccgg acggccgttg tcgggttcga ctggaggggc
       61 ggtgaagtca cctgcgagcg gtgcacccgc cgcgtccgaa tcgcgccggc ctcgcggggc
      121 cccacgcacc ctgcgaggct ggggccgagg agcaggcaga gtccgcgccc cgagtcggcg
      181 acgaggagga ggaggagtcg cacccttggc gccgccgccc gcacccgggc gggttattag
      241 caaaagatgg tggatcgcct ggcgaacagt gaagcaaaca ccagacgcat aagtattgtg
      301 gagagctgtt tcggggcagc cggtcagccc ttgaccatcc ctgggcgggt gcttattgga
      361 gaaggagtat tgactaagct gtgcagaaag aagccgaaag caaggcagtt tttcttattt
      421 aatgatattc ttgtatacgg caatattgtt atccagaaga aaaaatacaa caaacaacac
      481 attattccct tggaaaatgt caccattgat tctatcaaag atgaagggga attacggaat
      541 ggatggctta ttaagacacc gactaagtcg tttgcagttt atgctgccac tgccacggag
      601 aagtcagagt ggatgaacca cataaataag tgtgtcagtg atttactctc caaaagtggg
      661 aagacgccta gcaacgagca cgctgctgtc tgggttcccg actcggaggc caccgtgtgc
      721 atgcgctgtc agaaagcaaa gttcacacca gtgaatcggc ggcaccattg ccgcaaatgt
      781 ggctttgttg tttgtggtcc ctgctctgaa aagagatttc tccttcccag ccagtcttct
      841 aagcctgtgc ggatttgtga cttctgctat gacctgcttt ccacggggga catggccgcg
      901 tgtcagccga ctagatcaga ctcttacagt cagtcgttga agtctccttt aaatgacgca
      961 tctgatgacg acgatgacga tgatagcagt gactgaggac atgctgtgaa gtatttaatt
     1021 gactgtctga gaatcagctt tgggggaagt gtaaaactcc tggctccctc agttttgctc
     1081 tcgccatgac tgcccgagaa ggtcttactt actctctgtg cctgtatcct gtagaaagca
     1141 tccgataggg gcttggcttt ctactcctta tttctagatg attttcttgt aagttggaaa
     1201 gatgtttatt taacagatct tgtatcacat ttccccctga tttggaaaaa ctaaaagcac
     1261 agaatggtgg gaacctcgac atctgtggct tttccccaag cattctatgt aatggttaag
     1321 acaccagtga cacaacatgg gttggaaatt cctcattact tctcttttct caataccgag
     1381 tggtgcctta ctgtggcagc attgtcactg aaatcaacgt acaccctacc ttcttacttc
     1441 tttgatgcat ttaaacacac tggtgctctt acaggtggaa aatgaatgtt tgatcaatgt
     1501 aggtgagaat atttatttga cagctaccag gaactaaatt ttgaggtatc tccttatata
     1561 aatacatatt tttcataaaa tagttgcaat tatattttta tgtcttttag gcaccaaatg
     1621 ataatggtca cttgtatgct taaagctagc cagatgccac tctttggaat ttgatttgaa
     1681 attcatcact agttagaagt ggcgtattcc actggctttc actttcctaa gatattttta
     1741 catagaacta tttgctttac attatttcct aaaggaaaaa tctgaggaaa cccctatttt
     1801 tcccacacag ggtttctctg tgtagctttg cttgtcctgg aactcgatgt tgaccaggct
     1861 ggccttgaat tctcagaaat catctgcctt tgcctcccca ggcaccacta ccacctggca
     1921 aaaatgaaaa gtttttagaa aattctcaca gtagaacatg gaatcataca gatctggaag
     1981 agatcagagt ttgactagat ttcctgtctg caagcattgt caattttttt gtgtgaaatt
     2041 atcttgattt acaggtggtg ttgtatttta cagagtttat gaagccccaa acaattttta
     2101 tttttgtaaa acaattgtat gtttaatctg tttctgaaat catttcacgg tatatggaga
     2161 tagagtagca gttgatattt ctagattgca gcatcgatga ggttgctttg agaactggta
     2221 gttgctctct ttatgtttgg agacggctgt tgggctgtgg gcctgctctc tgcacagcgc
     2281 tctctgcaca gcactggcca tgctgtgcac attctggcca ttggcgtgct gcagtaacta
     2341 ggttttcaaa tgtgggaaac cagcaggcag aaaggttttt gtttttgttt ttgttttgtt
     2401 ttttccagag ttcttttcaa actccacccc cttttcaaaa tttaaaacat aattctgcag
     2461 atgccctgga gtttgattca gtaccgtgtg aatggaagag tcattgttac ttcgccgtgt
     2521 ggttacagta ctaatcttac ttttctgttc agatctgaaa gtgtgtggct gtatgggtct
     2581 gtctccctgc aggaaatgag gaaagcacag tagagcatgg cctgggggct ccgttcctgc
     2641 tttttgtctt ggttggtttt actgtcaaat ggaattttgt ttcagagcag cacatatgtg
     2701 tagtcagtaa gcgtgtttga aaggaccata aaaatcagag aaatgctggt ggaaacttgc
     2761 aaattcagga accaagggga aatgtcctga gataacattt gcattgttga cctttgttga
     2821 ttgtttttac agtaaaaata ttttgcagct t
//
