LOCUS       NM_001013148            1478 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus pleckstrin homology and FYVE domain containing 1
            (Plekhf1), mRNA.
ACCESSION   NM_001013148 XM_218543
VERSION     NM_001013148.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1478)
  AUTHORS   Lin,W.J., Yang,C.Y., Li,L.L., Yi,Y.H., Chen,K.W., Lin,Y.C.,
            Liu,C.C. and Lin,C.H.
  TITLE     Lysosomal targeting of phafin1 mediated by Rab7 induces
            autophagosome formation
  JOURNAL   Biochem Biophys Res Commun 417 (1), 35-42 (2012)
   PUBMED   22115783
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001013148.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC079354.1, DN948456.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1478              JAXUCZ010000001.1  100045340-100046817 c
FEATURES             Location/Qualifiers
     source          1..1478
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..1478
                     /gene="Plekhf1"
                     /note="pleckstrin homology and FYVE domain containing 1"
                     /db_xref="GeneID:308543"
                     /db_xref="RGD:1310544"
     exon            1..1478
                     /gene="Plekhf1"
                     /inference="alignment:Splign:2.1.0"
     CDS             25..864
                     /gene="Plekhf1"
                     /note="PH domain-containing family F member 1; pleckstrin
                     homology domain containing, family F (with FYVE domain)
                     member 1"
                     /codon_start=1
                     /product="pleckstrin homology domain-containing family F
                     member 1"
                     /protein_id="NP_001013166.1"
                     /db_xref="GeneID:308543"
                     /db_xref="RGD:1310544"
                     /translation="MVDHLANTEINSQRIAAVENCFGASGQPLALPGRVLLGEGVLTK
                     ECRKKAKPRIFFLFNDILVYGSIVLSKRKYRSQHIIPLEEVTLEPLPETLQAKNRWMI
                     KTAKKSFVVSAASTTERQEWISHIEECVRRQLLATGRQPTTEHAAPWIPDKATDICMR
                     CTQTRFSALTRRHHCRKCGFVVCAECSRERFLLPRLSPKPLRVCSLCYRELAAQKRRE
                     EAKERFRGSPGQLTHLGSTMCGASSGDDDDSDEDREGSGDGDWPTQVEFYASGVSWSA
                     FHS"
ORIGIN      
        1 tcctacagct tagctattga gaagatggtg gaccacttgg caaacacaga gatcaacagc
       61 caacggattg cagcggtgga gaactgtttt ggggcatcgg ggcaaccgct ggccctgccg
      121 ggccgtgtgc tcctaggcga gggagtgctg accaaggagt gccgcaaaaa ggccaagccg
      181 cgcatcttct tccttttcaa cgacatcctg gtgtatggca gcattgtgct gagcaagcgc
      241 aagtaccgca gccagcatat catccccctg gaagaggtaa ctctggagcc actgccggag
      301 accctgcagg ccaagaaccg ctggatgatc aagacagcca agaagtcctt cgtggtctcg
      361 gcagcctcca ccacagagcg ccaggaatgg ataagccaca tcgaagagtg cgtgcggagg
      421 cagctgctgg caacaggccg ccagcccacc acggagcacg cagcgccctg gatccccgac
      481 aaggcaacgg acatctgcat gcgctgcacg cagacacgct tctcggcgct cacccggcgt
      541 caccactgcc gcaaatgcgg gtttgtggtc tgtgctgagt gttccaggga gcgtttcctg
      601 ttgccacgtc tctcccccaa gccccttcgt gtctgcagcc tctgctaccg agagctggcc
      661 gcccagaagc ggagggagga ggccaaggag aggttcaggg gctctccggg gcagctgacc
      721 cacctaggca gcaccatgtg tggtgcgtcc agtggcgatg acgatgactc cgatgaggac
      781 agagagggca gtggagatgg tgactggccc acccaggtgg agttctatgc ttctggtgtc
      841 tcctggtcag ccttccatag ttgaccctca cctgcagagt gcctcaagcc agccctctgc
      901 cggggatcct tgcccacggt agtgggcatg tgaccggtgg ctgttccaga gccattacta
      961 gagcctttct gctaggcagc agctcctagg ccctcttcta attcttttca gagaatttcc
     1021 tttccatttc acaagctaca gctgcaaccc ttggagttag accaggccag gtgtgcccca
     1081 agcattaagt tgggagttga aaagggcaaa gggaaggcca gaccagaact gggggggggg
     1141 tccacttcaa ctctgaagct ggggctccag accccactcc cacctccaac tcctaacagg
     1201 tacagctgtc gggagggcat gaggctgcac atctaccatg cagatgccac cacctggcca
     1261 ctgggtcgtg ccaagctgga cccagatgta cagtgtgtac cctccaggcc agcccatcga
     1321 ggtctctgcc ctgtcactac caagtgtctg gtgtctgtgt gtcctgtccc catctctgtc
     1381 tgtggtcagt agaatcagtg ttttctctta ggactctagg ttcagggaca aaaaccctat
     1441 ccagactgat ttatcaataa acaaaaatga aataccaa
//
