LOCUS       NM_001191674            1720 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus phospholipase D family, member 5 (Pld5), mRNA.
ACCESSION   NM_001191674 XM_222934
VERSION     NM_001191674.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000013.1.
            
            On Jul 17, 2010 this sequence version replaced XM_222934.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.1848194.1,
                                           SRR26360194.109128.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-189               JAXUCZ010000013.1  90764884-90765072   c
            190-326             JAXUCZ010000013.1  90610957-90611093   c
            327-495             JAXUCZ010000013.1  90563017-90563185   c
            496-607             JAXUCZ010000013.1  90546807-90546918   c
            608-735             JAXUCZ010000013.1  90502824-90502951   c
            736-933             JAXUCZ010000013.1  90452963-90453160   c
            934-1070            JAXUCZ010000013.1  90444184-90444320   c
            1071-1239           JAXUCZ010000013.1  90439696-90439864   c
            1240-1354           JAXUCZ010000013.1  90434960-90435074   c
            1355-1720           JAXUCZ010000013.1  90428490-90428855   c
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q24"
     gene            1..1720
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /note="phospholipase D family, member 5"
                     /db_xref="GeneID:289270"
                     /db_xref="RGD:1562609"
     CDS             1..1611
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /codon_start=1
                     /product="inactive phospholipase D5"
                     /protein_id="NP_001178603.1"
                     /db_xref="GeneID:289270"
                     /db_xref="RGD:1562609"
                     /translation="MEIRQHEWLSASPHEGFEQMRLKSRPKEPSPSLTRVGANFYSSV
                     KQQDYSASVWLRRKDKLEHSQQKCIVIFALVCCFAVLVALIFSAVDIMGEDEDGLSEK
                     NCQNKCRIALVENIPEGLNYSEDAPFHLPLFQGWMNLLNMAKKSVDIVSSHWDLNHTH
                     PSACQGQRLFEKLLQLTSQNIEVKLVSDVTADSKVLEALKLKGAEVTYMNMTAYNKGR
                     LQSSFWIVDKQHVYIGSAGLDWRSLGQMKELGVIFYNCSCLVLDLQRIFALYSSLKFK
                     SRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVID
                     DAKQYVYIAVTDYLPISSTSTKRTYWPDLDGKIREALVLRSVKVRLLISFWKETDPLT
                     FNFISSLKAICTEIANCSLKVKFFDLERENACATKEQKNQTFPKLNRNKYMVTDGAAY
                     IGNFDWVGNDFTQNAGTGLVINQADVRDNRSIIKQLKDVFERDWYSPYAKSIQPTKQP
                     NCSNLSKLKTPSNQPAIYNTTGREPLSV"
     exon            1..189
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
     exon            190..326
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
     exon            327..495
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
     exon            496..607
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
     exon            608..735
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
     exon            736..933
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
     exon            934..1070
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
     exon            1071..1239
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
     exon            1240..1354
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
     exon            1355..1720
                     /gene="Pld5"
                     /gene_synonym="RGD1562609"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagatcc ggcagcacga gtggctctcg gcctcccccc acgagggttt cgagcagatg
       61 agattgaaaa gccgccccaa ggaaccctcg cccagcctga cccgagtggg cgcgaacttc
      121 tacagcagtg tcaagcagca ggactacagc gccagcgtct ggctccggag gaaagataag
      181 ctggaacact cccagcagaa gtgcattgtg atcttcgctc tggtctgctg cttcgccgtt
      241 ctggtcgcac tgatcttttc agctgtggac atcatgggag aggatgagga tggactctcg
      301 gagaagaatt gccaaaataa atgtcgaatc gctcttgtgg aaaacattcc tgaaggcctt
      361 aactactctg aggatgcccc atttcactta ccgctcttcc aaggctggat gaacttactc
      421 aacatggcca aaaagtctgt cgacatagtg tcttcccatt gggacctcaa ccacacccac
      481 ccatctgcat gtcagggtca acgtctcttt gagaaattgc tccagctgac gtcgcaaaat
      541 attgaagtca agctggtgag cgatgtgact gcagattcaa aggtattaga agccttgaag
      601 ttaaagggcg ctgaggtgac atacatgaac atgaccgcct acaacaaggg ccggctgcag
      661 tcgtccttct ggattgtgga caaacagcac gtgtacatcg gcagcgcagg cttagactgg
      721 cgatcgcttg gacagatgaa agaactcggt gtcatcttct acaactgcag ctgcctggtc
      781 ctagatttac agaggatatt cgctttatat agctcattaa aattcaagag cagagtacct
      841 cagacctggt ccaagagact ctatggagtc tatgacaatg aaaagaagct tcagctccaa
      901 ttgaacgaaa ccaagtcgca ggcctttgtg tcgaactctc ccaaactctt ttgccctaaa
      961 aacagaagct ttgacattga tgccatctac agcgtgattg atgatgccaa acagtatgtg
     1021 tacattgctg tcacggacta cctgcctatt tccagcacga gcaccaaaag gacttactgg
     1081 ccagatttag atgggaaaat aagagaagca ttagttttac gaagcgttaa agtccggctg
     1141 ctcataagct tttggaagga gactgatccc ctcacgttta acttcatttc gtctcttaag
     1201 gctatttgca ctgaaatagc caactgcagt ttgaaagtta aattttttga tctggaaaga
     1261 gagaacgctt gtgcaacaaa agaacaaaag aaccagacct ttcccaaatt aaaccgcaac
     1321 aagtacatgg tgacagatgg tgcagcttac attggaaatt ttgactgggt ggggaatgac
     1381 tttacccaga atgctggcac gggccttgtc atcaaccagg cagatgtgag agacaacagg
     1441 agcatcatta agcaacttaa agacgtgttt gagagggact ggtattcacc ttatgccaaa
     1501 tctatacagc caaccaaaca gccgaactgt tcaaacctgt ccaaactcaa gactccctcc
     1561 aaccaacctg ctatttacaa caccacaggg agggagcccc tgagtgtata gctcactaag
     1621 agacaagcaa ggcttcagac caaatgcagg aaggactaga ggaaagacaa cgatttgtta
     1681 catctttttt ttaaaagggg aaattaaaaa gcacacttat
//
