LOCUS       NM_001107671            1882 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus phosphatidylinositol-specific phospholipase C, X
            domain containing 3 (Plcxd3), mRNA.
ACCESSION   NM_001107671 XM_001054629 XM_227078
VERSION     NM_001107671.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Biesemann C, Gronborg M, Luquet E, Wichert SP, Bernard V, Bungers
            SR, Cooper B, Varoqueaux F, Li L, Byrne JA, Urlaub H, Jahn O, Brose
            N and Herzog E.
  TITLE     Proteomic screening of glutamatergic mouse brain synaptosomes
            isolated by fluorescence activated sorting
  JOURNAL   EMBO J 33 (2), 157-170 (2014)
   PUBMED   24413018
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474048.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_227078.4, XM_001054629.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132296,
                              SAMD00155319 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q16"
     gene            1..1882
                     /gene="Plcxd3"
                     /gene_synonym="RGD1308448"
                     /note="phosphatidylinositol-specific phospholipase C, X
                     domain containing 3"
                     /db_xref="GeneID:310358"
                     /db_xref="RGD:1308448"
     exon            1..324
                     /gene="Plcxd3"
                     /gene_synonym="RGD1308448"
                     /inference="alignment:Splign:2.1.0"
     CDS             222..1187
                     /gene="Plcxd3"
                     /gene_synonym="RGD1308448"
                     /codon_start=1
                     /product="PI-PLC X domain-containing protein 3"
                     /protein_id="NP_001101141.1"
                     /db_xref="GeneID:310358"
                     /db_xref="RGD:1308448"
                     /translation="MASSQGKNELKFADWMATLPESIHSIPLTNLAIPGSHDSFSFYI
                     DEASPVGPEQPETVQNFVSVFGTVAKKLMRKWLATQTMSFTGQLGAGIRYFDLRISTK
                     PRDPDNELYFAHGLFSAKVNEGLEEINAFLTDHHKEVVFLDFNHFYGMQKYHHEKLVQ
                     MLKDIYGNKMCPAIFAQEVSLKYLWEKSYQVLVFYHSPVALEVPFLWPGQMMPAPWAN
                     TTDPEKLIQFLQASITERRKKGSFFISQVVLTPKASTVVKGVASGLRETITERALPAM
                     MQWIRTQKPGESGINIVTADFVELGDFISTVIKLNYVFDEGEANT"
     exon            325..1033
                     /gene="Plcxd3"
                     /gene_synonym="RGD1308448"
                     /inference="alignment:Splign:2.1.0"
     exon            1034..1882
                     /gene="Plcxd3"
                     /gene_synonym="RGD1308448"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaacaaaagc cccggcagtg gagtctggca aggcaaggag ggagcatggg gtgtttttga
       61 ataattatta aaatgagcat gtgtctgcgc catcctgtgg gtgtggcgca gagcagagtg
      121 taaactctag ccgggcgaag caaacattgg cttagcggca gcagctgcca gcctgtgcct
      181 aggagtgtgg ggactagcgt ggcggcaagc agaccggcac catggcttcg tctcagggga
      241 aaaacgagct gaaattcgcc gactggatgg caactctgcc tgagagcatc cacagcatcc
      301 ccctcaccaa tttagccatc ccagggtccc atgattcctt cagcttctac attgatgaag
      361 cttctccagt aggccctgag cagccagaaa ctgtccaaaa ctttgtctct gtgttcggaa
      421 ctgtagccaa gaagctgatg cggaaatggt tagccactca aacaatgagc ttcactggtc
      481 agctgggagc tggaatccgt tactttgatc ttcgaatttc caccaagccc agagacccag
      541 acaatgaact gtattttgct catggcttat tcagtgccaa agtcaatgag ggtcttgaag
      601 agatcaatgc atttctcaca gaccaccaca aagaggtagt attcttggac ttcaatcatt
      661 tctatgggat gcagaaatat caccatgaaa aattggtcca aatgctgaaa gacatctatg
      721 gaaacaaaat gtgcccagcc atttttgccc aggaagtgag tttaaagtac ctatgggaga
      781 agagctatca agtattggtc ttctaccaca gcccagtggc actggaagtg cccttcctct
      841 ggcctgggca gatgatgcca gcaccttggg caaacacgac agaccctgag aaattgatcc
      901 agtttcttca ggcatccatc actgagagaa gaaagaaggg ctcgtttttt atatctcagg
      961 tggtgctgac acccaaagca agcacagtgg tcaagggtgt ggcaagtggc ctcagagaaa
     1021 caatcacaga aagagctctc cctgccatga tgcagtggat ccgcacccag aagccaggag
     1081 agagcggcat caatattgtc actgctgatt ttgtagaact tggtgacttt atcagcactg
     1141 tcataaaact caactatgtc tttgatgaag gagaagccaa tacttgatat tactcttctg
     1201 agtgtcctta aggaagatag agaagcctca ttgtattaga catattatca ataagccctc
     1261 tgattttcct gttccactga gtctctgaag gaattaaggt ttagcagtgg gcagaaaatg
     1321 agggtaaatc atgtcttcag tgattgtaac catattctgc attgctataa atatgtcatt
     1381 tccaatttgg tgaccaaaat ctacttctag tgttaggaat agaaaagaac agtgaatttc
     1441 atttttcaga attaatgttt gtgctgtgta actcatgagt gtttactaga ttgcattttc
     1501 taatttcaac ctcggggccc tgtattattc atagcctcaa ccctttccac tccctctctc
     1561 ttgctcgctc ttcctaatta gatgctatat gggtctcaaa acaattgaat gcccaacata
     1621 atgtgcattg cattgttgtg ttgaaatgtg tttgtttcgt gagacttggt aaaatatccc
     1681 atagtcatct gcaattgggc aatcatagct aattcttggt cgtagaaaat atgcatcaaa
     1741 tcagtctccc tgcatctgta atattgtcag tcaggagtga ttttgtgttt taggaaaaca
     1801 acagcatttc acagcagctc tgtgcgaagc agctaggact accatgcaaa cagacttttg
     1861 gaaagacaag tgtcaacttc ac
//
