LOCUS       NM_001134481            7366 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus phosphatidylinositol-specific phospholipase C, X
            domain containing 2 (Plcxd2), mRNA.
ACCESSION   NM_001134481 XM_001066101 XM_344018
VERSION     NM_001134481.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 7366)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 7366)
  AUTHORS   Bonaldo MF, Lennon G and Soares MB.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000222.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001134481.3.
            
            On Feb 10, 2021 this sequence version replaced NM_001134481.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132290,
                              SAMD00132292 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-721               JACYVU010000222.1  34110774-34111494
            722-1182            JACYVU010000222.1  34141936-34142396
            1183-1424           JACYVU010000222.1  34150340-34150581
            1425-7366           JACYVU010000222.1  34157177-34163118
FEATURES             Location/Qualifiers
     source          1..7366
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q21"
     gene            1..7366
                     /gene="Plcxd2"
                     /gene_synonym="RGD1563504"
                     /note="phosphatidylinositol-specific phospholipase C, X
                     domain containing 2"
                     /db_xref="GeneID:363781"
                     /db_xref="RGD:1563504"
     exon            1..721
                     /gene="Plcxd2"
                     /gene_synonym="RGD1563504"
                     /inference="alignment:Splign:2.1.0"
     CDS             559..1581
                     /gene="Plcxd2"
                     /gene_synonym="RGD1563504"
                     /codon_start=1
                     /product="PI-PLC X domain-containing protein 2"
                     /protein_id="NP_001127953.1"
                     /db_xref="GeneID:363781"
                     /db_xref="RGD:1563504"
                     /translation="MLAFRKARRKLRMGTICSPNPSGTKTASEVCNADWMASLPPHLH
                     NVPLSNLAIPGSHDSFSYWVDEKSPVGPDQTQAVKRLARISLVKKLMKKWSVTQNLTF
                     REQLEAGIRYFDLRVSSKPGDTDQEIYFIHGLFGIKVWDGLMEIDAFLTQHPQEIIFL
                     DFNHFYAMDEAHHKCLVLRIQEAFGNKLCPACSVESMTLRTLWEKKYQVLIFYHCPFY
                     KQYPFLWPGKKIPAPWANTTSVQKLILFLETTLSERAPRGAFHVSQAILTPRVKTIAR
                     GLVGGLKNTLVHRNLPAILDWVKTQKPGAMGVNIITSDFVDLIDFATTVIELNDLLED
                     RALTKC"
     exon            722..1182
                     /gene="Plcxd2"
                     /gene_synonym="RGD1563504"
                     /inference="alignment:Splign:2.1.0"
     exon            1183..1424
                     /gene="Plcxd2"
                     /gene_synonym="RGD1563504"
                     /inference="alignment:Splign:2.1.0"
     exon            1425..7366
                     /gene="Plcxd2"
                     /gene_synonym="RGD1563504"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggggccgccg gttactcttc tgagagccct tcagaaaagc acagggcagt gggcagagaa
       61 gccagggggc gggggtgcag gcaggcccag cttgtgtacc agcccgggga cacccacgga
      121 agcacccatg aataagatat ggtgcaaccc gggcgcgcac gtgtgtgcag cccgctggca
      181 cgtctctatg cccggtaggc acctgtcgtg tgagtagctc cgggtgtggc tgttcctgga
      241 tgctgtgggt ttcagtaagg tttgtatctt cgggcctgcc tccccggtct ccagagagga
      301 actaagaagt ttaactgagc agagactgag gagattaaag gagtggatct cagaggcaag
      361 gcggagaggg tggggactgc gggcgcagcg ggcacagcgg gcggggaagc acccatttga
      421 cccatctcgg agctagaaaa gaatcctgaa aagactggca tgacccatgt gctctgaaat
      481 gtttagagag ccccgagcgg tgatgaccac agagtgagtg gcactaggct gagcctgtct
      541 aattcgtgga caacagggat gcttgcattt agaaaggcca ggaggaaact caggatgggc
      601 accatctgct ctcccaatcc cagcgggaca aagacagcct cggaggtctg caatgctgac
      661 tggatggcct cgctcccccc tcacctccac aacgtccccc tttccaatct ggcaatccca
      721 ggctcccatg attcattcag ctactgggta gacgaaaagt ccccagtggg gcctgaccaa
      781 acccaagctg tcaaacgcct tgcccggatc tccttggtaa agaaattaat gaagaaatgg
      841 tctgtaactc agaacctgac cttccgggag cagctagagg ctgggatccg ctactttgac
      901 ctacgtgtgt cttctaagcc cggagacact gaccaggaga tctacttcat ccatgggctc
      961 tttggcatca aggtttggga tgggttgatg gagattgatg cattcctcac tcagcatcct
     1021 caagagatca tcttcctgga tttcaaccac ttctacgcca tggatgaggc ccaccacaaa
     1081 tgcctggttc tgcggatcca ggaggccttt gggaacaagc tgtgcccagc ctgcagtgtg
     1141 gaaagcatga cactgcggac cctgtgggag aagaagtacc aggttctcat tttctaccac
     1201 tgtcccttct acaagcaata cccattcctg tggccaggga agaagatccc ggcaccctgg
     1261 gcaaacacca cgagtgtgca aaagctgatt ctcttcttgg agaccacctt gagtgagcga
     1321 gccccacgtg gggccttcca tgtctcccag gccatcctca ccccaagagt gaagactatt
     1381 gcccgaggcc tggtgggggg cctcaagaac acactagttc acaggaatct ccctgccatc
     1441 cttgactggg tgaagactca aaagcctgga gccatgggtg tcaacatcat cacatctgac
     1501 tttgtggacc tgatagactt tgccacgact gtgattgagt tgaacgacct tctagaggat
     1561 cgagctctga ctaagtgttg aatctgtgct ttgtgtaatt tgatgttgag gttcttgatc
     1621 caaggtagga ttctagaggg ttctagtaaa gatggctccc tcctaggcag tcacggggaa
     1681 gtgaggaaga aaaagaggcc ctctcctttt cctcacatag ctatttggat tagaaaaaaa
     1741 aaatctaagg gtttgcattt ccccgaaatg agacttttac acacttaagt ctaagagaag
     1801 aatgcacatt tcctatggtt aacatcggga tctccctagt ggcttggggt ggcaaaagga
     1861 ggatggaagc agccttttca ggtctcacgg gctatgcagc gtcttaattg gcccagcctc
     1921 cggttgtctt ctggggccac ttgagcctct gtgaagacta aatcagaaag gcattcctgg
     1981 tcagaagaat ggtacatgca agtgtgggcc accctgagag gtctctgtta tcaacctaga
     2041 gctctaagga gctcctaggg agccaataaa ctgtacggca tcactgcttt tccacaggag
     2101 gaaaaatgtt tcttatcaca gtgctcagcc acaggccagc tctgcgtatc ttgcttgggc
     2161 tgaaagtggg cacctttgtt cttcatataa ctagtgcaca ctacccttgg catcagaaat
     2221 gtatttcctc attttaatgt gttttgggcc ctatctttaa agtgaaagga acagtagcgg
     2281 gaagtctttt gtgtgagggc ccgacatgaa ctacccatgc atgtttgttg cctgcatgcc
     2341 agaagtcttt aattctgtag ccttctcccc aaacgactat caggcaagta cctgcatcgt
     2401 ttcggcaaag tcctctttgg agcaaggtgt tcaagccaga tagcagaatc atgtcttatg
     2461 gttgtctggg accgggactg ccagaggaca taaggcttgc ccatgacact gtggaggctg
     2521 acacagaata tgtgggaatg tgcaacggaa ttaaaggaca aagttccaag tgggctcgga
     2581 gccagtctgt aactccttgc aaacaagact acctcgggga catttagcgg gactcgtatg
     2641 tcgtcaagta aggggaaaaa aagcaatgtt ggaccatttc cgcttgtttt ttccacttgg
     2701 tctgctttct gtggattgtt cgccaactac ctttgcatga gggcttgaaa acacaagggg
     2761 aatttttttt aattgataag aggtgctttt tattgataag agccctcttt tgttttttca
     2821 tttgcttcgt ttgtgtattt attgatttat ttattcatgg agtaaggatc tgtggtgttc
     2881 cttgcctgga gaatgctttc agatgtttac tggactgttc ctacccagga tgctgctgtg
     2941 gtcgtccacc catgcgctgc atggtgcatc tcaggggctg tgacctcgtg actttgctgt
     3001 agatccccta tcccaccccg atcttgctga ggacagtgtg taagtgtgga tgagatccag
     3061 ctctaggaag ctactgccaa aggcatgcac aggaacagaa gtgacagggt catgaaaaac
     3121 cacacaggca cttctgttag agcactggca agacgagaac taggaataat agctgagcgc
     3181 atctgtgagt gcgctttgct aaccttcagc cctatttgag aatccctaag gaggtgtcgg
     3241 tttccacatt cctaaggagg aatataaaca ggctgccctg ggcggggatg tacatttaca
     3301 gagattgctg gaccttctcg tacgtttccc atctctccct ttgattgcct agtcagttgt
     3361 gcatgctgac tgctgtgggg ctatcttggg tgagctattg aaaacatgcc tgcccctaat
     3421 tgctgatcac ctgacctttt tttcccccta aagtaactta ggccttgact tttcacttct
     3481 atagttcata caggccacag cacaaacgcc tctgagaaaa cccgatttaa cttctgttct
     3541 tgaatttgaa tctggcccag aggtggcttc tggaatgatc ttgtcaaatt tggcaaagcc
     3601 ttctctgcac agggcttcct cattgtagag gagtgcatat tcccatcatc ataatttccc
     3661 ttcagttatg atgctgagct ctacagagga ggtcccaaaa ccttagccta cccccaggtt
     3721 ttaatttttg tttttattgt tgcattattt gggggggggg gcggttttaa ctatcaattg
     3781 gttacaacgg actagatccc tcccttctgt taaccctttg ttacttggca aagagataag
     3841 gaggcaagag gagagtcatt ctgctctgtt ttatttgggc ctcagctttg tccaggtgct
     3901 cggtgctatg gagcctgggt gtccgcaggt atctgcacca gttggatatc agtttcactt
     3961 taaggctgca gactgttcag tgagctgttt acttcctttt ctcccttgtt ctcaaataca
     4021 aagttgtagt tcacttctga cctttaagtg cacctcaacg tttgcatgct gcaccatcaa
     4081 acagaacaca gaagcacaga acacttccaa ggccacgtgt atgaacccct tctcctgtag
     4141 ggagtgtaca agtgcttgta ccagtttgtc cttgctgttc tggggtccca gacttgctga
     4201 tattctgaaa gtctgagagg tagggggagg gttattcaca attcttccca ggaattaccc
     4261 acatctctgc cccaagaaaa ggcttccaac attggaaagg ctgcatgtat tctgttcctt
     4321 gaagaccagg cagaaactca agtgagttgg acagagaaaa aaagtagaac atgggcctgt
     4381 cactcattct gtcgtactta aaagtaagcg ttcctaccca aatatatcac acattctcta
     4441 aacttagttg gggccatttc tgtttggaaa tttaatgggt tcttcatgaa ttctctgcac
     4501 cattccaaca tagccatatt tccttgatgg cccagacctg gatgccctag gtctctgtgg
     4561 gttagaacac tgtctcaggg ttgaacattg agtttatcag aagttccagg tatgctatgg
     4621 atggagacag ttttcttagg agtgaacaga gagcagagag tggatgtgat ggaagagatt
     4681 ggtgagtgtt tgaggatttg gtctgagatc atggcagatc ttagaggtca tgcaaaaaat
     4741 atgcatatat ttgctgcata agatttgata gtcgttattt tctctagtgc tgggtccaga
     4801 ccctgaattt tttagaactg ttaacctaga gtttagagtt caaatccaat attttatata
     4861 cacgcaaagg aaaagcatac aatctatgca gagatactga cagaccttaa gaaccccaga
     4921 tttttcatag cctcatgttc acatctggaa atgtatgctt ctgtccagga aggcaatgga
     4981 acgaaggttt ctgagattaa atgaagcttt ctgatgtgtc tggatatttg cgtgttttct
     5041 tcagtggtta gagttagggt tagagtcagg ggtcaggtgt cttgggtcaa gggttagggt
     5101 tagttctcac cagtaggaag catttccaaa gagacatgat acagctcagt cacaagcaca
     5161 aagtgaaagg tggagaccaa caagaaatcc aggctgaaag gaaactacca ttttctctga
     5221 gaagcaaaag gactacaagc tgacatcatt acagaggttt tatgatgatg ccctcaactg
     5281 tctgttacgt tctaggaaac agaacaggct aatgaatggg tcacgagatc tcctccctta
     5341 gctgagcaat tggtcctgtg ctaaactgtc actggttctt ccatctctaa tagtgacaca
     5401 aatctcagat gtttggttca taaaatatgt gaggttctag agctcggcct aaatgccttg
     5461 tactccgggg aggcaccctt agcatcatac ttccttctgt gcacatgcgc agagaacatg
     5521 gttagagtca tgcaagagcg tgaaacaggc tgaaagagtt tgactatggg ttataccttc
     5581 ccgggtctat ataatgtgtg gggctcattg aagtctgcca aaatgtgtgt gggcccctgg
     5641 gtgggctttc tctagagtga acagtagaca ttgaaagaat caaacataca agccaacagg
     5701 acactcattt ggtgcagcat agaaaagcat aggtgtccct ctagatttcc ttaactgtcc
     5761 accacatctt aaccctcttc tgcagctgct tcctcatagg tgacaccatg gtttcattac
     5821 tcagtagtgt caccttggga cacagggaga tgattgaata acaagtggtg tcaatacaaa
     5881 cttccccctc aatggggctg gggatttagc tcagtggtag agcgcttacc taggaagcgc
     5941 aaggccctga gttcggtccc cagctctgga aaaaaaaaaa aagaaccaaa aaaaaaaaaa
     6001 aaaaaaaaac ttccccctca attccagatg gttctaatca gcttgttact gccccaagag
     6061 agctcctacg accacaacgt ttggattgcc cagcttcctg ctacacacac tgacactagc
     6121 ggccatatgt ctgagctagc ctaactctga agcaacccta caatggcaca atgtcttaga
     6181 cagtgtaaaa aatatcctaa gataaggatc tcctgcttta gataccgtgc tttagcatca
     6241 aatccagcaa acttgtcctt aaaactcata aaaatccact ttaaagaaaa gtggtttgaa
     6301 taagacaatt ccttcttctc ttctgggggg gaattcagaa gcacatctgt tgaggcaact
     6361 gcatcgacaa tctccaggca tttttctgtc acccttgccc attccctaca tagaatgcta
     6421 cttccccctc ttatatctag catctccatc atccgcccat gactgcgtca caagatgctg
     6481 acggagagca cactctggcc atcatggtgg tttttcttta gccttctcaa atgcattgtc
     6541 ctgcttcctg ctcccgccca atcattagaa ctatgcttaa ttagagccct gaaatcggga
     6601 ccaatattta attcacatag cacaggcttg cccaccaaga agcatagcac tttgaaaagt
     6661 catagaggcc tttggcagct ctgtatagtt gcaatggtca cacccgtaat cggttgatag
     6721 caccaataat atgtcaataa gagatctata gaatcaagat gataactttt agatcatgtc
     6781 ctagaaataa taacaccttg ctgctattat taccccagta tgaataagta ttaaatgcag
     6841 tatttgtatt atgtacatac ccactgtaat acttagcctc cctgatccgt aacttaaaat
     6901 tataaaagtt gttacagtaa aaacaagtct tggataattt gtgtatctga tacatgctgt
     6961 aatggagatt atattttgtc ttctatccat tgatttacac tgcaatgcat gtggtttgct
     7021 aaacttaaga aataataatc aattttacca attttaaggt taaggataaa attgtgcata
     7081 tatgcttctt gacactctgc gatgtatctg tggcctgatt gtcaatgtca tatagacttt
     7141 acttgcattc tttccctcta gcaagtaatt attgaattgc atctcttctc tcttgaaatc
     7201 cggattaaat cacttggtta atcctaaact attgtgaagc cacagtacct cattttaact
     7261 gtgaaaaaaa agtgttaata agtcttaccc tatgatgtgt ttccttgtat ttgatttgag
     7321 ccagttaaca aggtttaaac ctagtaataa atatgaatct ttaata
//
