LOCUS       NM_001105871            2976 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus phospholipase A and acyltransferase 1 (Plaat1),
            mRNA.
ACCESSION   NM_001105871 XM_001053962 XM_213590
VERSION     NM_001105871.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2976)
  AUTHORS   Hussain,Z., Uyama,T., Kawai,K., Rahman,I.A., Tsuboi,K., Araki,N.
            and Ueda,N.
  TITLE     Comparative analyses of isoforms of the calcium-independent
            phosphatidylethanolamine N-acyltransferase PLAAT-1 in humans and
            mice
  JOURNAL   J Lipid Res 57 (11), 2051-2060 (2016)
   PUBMED   27623847
REFERENCE   2  (bases 1 to 2976)
  AUTHORS   Uyama,T., Ikematsu,N., Inoue,M., Shinohara,N., Jin,X.H., Tsuboi,K.,
            Tonai,T., Tokumura,A. and Ueda,N.
  TITLE     Generation of N-acylphosphatidylethanolamine by members of the
            phospholipase A/acyltransferase (PLA/AT) family
  JOURNAL   J Biol Chem 287 (38), 31905-31919 (2012)
   PUBMED   22825852
REFERENCE   3  (bases 1 to 2976)
  AUTHORS   Uyama,T., Ichi,I., Kono,N., Inoue,A., Tsuboi,K., Jin,X.H.,
            Araki,N., Aoki,J., Arai,H. and Ueda,N.
  TITLE     Regulation of peroxisomal lipid metabolism by catalytic activity of
            tumor suppressor H-rev107
  JOURNAL   J Biol Chem 287 (4), 2706-2718 (2012)
   PUBMED   22134920
REFERENCE   4  (bases 1 to 2976)
  AUTHORS   Shinohara,N., Uyama,T., Jin,X.H., Tsuboi,K., Tonai,T., Houchi,H.
            and Ueda,N.
  TITLE     Enzymological analysis of the tumor suppressor A-C1 reveals a novel
            group of phospholipid-metabolizing enzymes
  JOURNAL   J Lipid Res 52 (11), 1927-1935 (2011)
   PUBMED   21880860
  REMARK    GeneRIF: a possible enzyme activity of A-C1
REFERENCE   5  (bases 1 to 2976)
  AUTHORS   Akiyama,H., Hiraki,Y., Noda,M., Shigeno,C., Ito,H. and Nakamura,T.
  TITLE     Molecular cloning and biological activity of a novel Ha-Ras
            suppressor gene predominantly expressed in skeletal muscle, heart,
            brain, and bone marrow by differential display using clonal mouse
            EC cells, ATDC5
  JOURNAL   J Biol Chem 274 (45), 32192-32197 (1999)
   PUBMED   10542256
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001105871.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643299.48626.1,
                                           SRR26643288.46078.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-150               JAXUCZ010000011.1  85040817-85040966   c
            151-289             JAXUCZ010000011.1  85031688-85031826   c
            290-555             JAXUCZ010000011.1  85028838-85029103   c
            556-2976            JAXUCZ010000011.1  85022297-85024717   c
FEATURES             Location/Qualifiers
     source          1..2976
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q22"
     gene            1..2976
                     /gene="Plaat1"
                     /gene_synonym="A-C1; Hrasls; HRSL1; RLP-2"
                     /note="phospholipase A and acyltransferase 1"
                     /db_xref="GeneID:288025"
                     /db_xref="RGD:1309485"
     exon            1..150
                     /gene="Plaat1"
                     /gene_synonym="A-C1; Hrasls; HRSL1; RLP-2"
                     /inference="alignment:Splign:2.1.0"
     CDS             151..654
                     /gene="Plaat1"
                     /gene_synonym="A-C1; Hrasls; HRSL1; RLP-2"
                     /EC_number="3.1.1.4"
                     /EC_number="3.1.1.32"
                     /note="HRAS-like suppressor 1; phospholipid-metabolizing
                     enzyme A-C1; LRAT-like protein-2"
                     /codon_start=1
                     /product="phospholipase A and acyltransferase 1"
                     /protein_id="NP_001099341.1"
                     /db_xref="GeneID:288025"
                     /db_xref="RGD:1309485"
                     /translation="MAVNDCFSLTYPHNPHPGDLIEVFRPCYQHWALYLGDGYVINIA
                     PVDGIPSSFSSAKSVFSTKALVKMQLLKDVVGNDTYRINNKYDTTYPPLPVEEVIQRS
                     EFAIGQEVTYDLLVNNCEHFVTLLRYGEGVSEQANRAIGTIGLVAAGIDIFTFLGLFP
                     KRQGAKS"
     exon            151..289
                     /gene="Plaat1"
                     /gene_synonym="A-C1; Hrasls; HRSL1; RLP-2"
                     /inference="alignment:Splign:2.1.0"
     exon            290..555
                     /gene="Plaat1"
                     /gene_synonym="A-C1; Hrasls; HRSL1; RLP-2"
                     /inference="alignment:Splign:2.1.0"
     exon            556..2976
                     /gene="Plaat1"
                     /gene_synonym="A-C1; Hrasls; HRSL1; RLP-2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtggtggcc ttggcggtgg ccttggcctc agggtgctgc ggatggagtc acccagagtc
       61 tgctagcggc gccgcaggga gccggtggag aacccaagaa gcccgccact gccttctggg
      121 gcactaagac aacccagctt gagcagggag atggcggtta acgattgctt cagtctgacc
      181 tatcctcaca acccccaccc aggagacttg attgaagtgt tccgtccttg ttatcagcac
      241 tgggcactgt acttgggtga tggctacgtt atcaacattg cacctgtaga tggcattccc
      301 tcatcatttt caagtgccaa gtctgtgttc agcacaaagg ccttggtgaa aatgcagctt
      361 ttgaaggatg ttgtgggaaa tgacacatac agaataaata acaagtacga cacgacctac
      421 cctcctctcc ctgtggagga agtgatacaa cggtcagagt tcgcgattgg gcaggaagta
      481 acctatgact tactggtcaa caactgtgag cattttgtga ccttgctccg ctatggagaa
      541 ggagtgtcag agcaggccaa ccgagcaatc ggcaccatcg ggttggtggc agctggtatt
      601 gatatcttca cattccttgg cttgtttccc aaaagacaag gagcaaaatc ttagcagttt
      661 attgaagaga ttggaatgaa gaagtttgtg aggggagaga gatctggggt gaatacttat
      721 tttgaatgct tcattattgc tcatggtccc catgatggat ggcagactct gtaataaatt
      781 gcttgctgat tttaatctta tcgctgagcc gagaaaagtt tttccccact agtagagatt
      841 tgccgtggtg gcttgaacaa aacgcagttg ccttttgatc gagccagctg aggatctgaa
      901 ctaaaccaag accgcatttc atcttctact gtaaatattg tttccctttt ccctaaggac
      961 ggctgttttg ccagaggttc ggagaaccat ttacatatgc ttctgaaagg tagtcgctag
     1021 ggccaacgtc taaattctta ttcctttcct tgtcagaaga aagggaagcg aacatatcca
     1081 atactacaga tacatggata catggatacg tccatggtac acatccaaat acttaaggat
     1141 ctcggaacga caaagcattt gcagcacctg tgtgggcaga acctgaaaga agagggtggg
     1201 tgggggattt tgtatggaat tcttatgagc agtgtgcgtg tggacagttt taggtgtcag
     1261 cctttggtct ccatcttttt tatttttatt ttgtttttga tgtttaaaaa aaattttttt
     1321 tggagacagg atgtgctgtc cttcacatct tatggcaaac tagctagcct gggagcttcc
     1381 agggagcctc ctgtctctgc ctccattgca cggtaagcgt tctggaatta cagatgtaca
     1441 ccaaaaagcc aagttttata tggactctgg ggatctgagc tcaaggcttc atgcttatgt
     1501 atgaaaacac tttacccact gagctcctct ctctctctct ctctctctct ctctctctct
     1561 ctctgtcttg tactttcaga cccagtgagt tcaggaatca gtgttgagga atgggctgta
     1621 ttttgaatga tttaaatgga tccttccaga ttgtatagta gttcagtggt tcggcctttg
     1681 ggccttggca agcaatcatt agtaatgatg taaagtgcta tatttataat gcaaatttcc
     1741 tcatccctca agggatccca tgattttagt cttccatttt actgattata tgttgaatta
     1801 aactactttt aatgccattc ctgtagcatt cttggtagta gcaggtcagg aaaggtagaa
     1861 tgtaagtctt ttctacatga agatgatgta agggcatcat agcacgagcc cataaaccac
     1921 acagctagcc ccgcatcctt ttgtgccatt atcaaaagca tgttggtcat aaggaaatgt
     1981 gtcagtgaac acaggagtag aaagtgatag aatatggtaa agtccagtgc agaaggctca
     2041 atggaggcct cacacctggt aaactgattt gaccttgttg ctagaaacac tctcactact
     2101 gaagggaagc aagagtaacg ttaacagaag tatgtgctgc cattcccgtc ccagagtccc
     2161 tctgtccctt ctttattttt ccacaacaga cccttctcct tctaaccccc aaactcaccc
     2221 ttcagtgcat ggtcttctca gaaagcacac agttactttt atcctgaata caggtctcag
     2281 ctcagtgggc aaagcttttt ataatatatt ctttatatag taaagagtac acaggttttg
     2341 agaattttcc cattaaggaa agagcagctg cagccactgg gccttcttcc ctctttcccc
     2401 ctcgtgtgcc acctttcaat aaaatatatt tacagagagc aagccagctc acagcagaca
     2461 ttcatctctg gcagaattag accgccagcc aggaaaaggg aggagtaggg ttgagaacca
     2521 aaagcctctt ggggcttcag gacaaacctt tctagagaac tctgacatct ccactccgga
     2581 aaagaagcga ggtgttaaaa gagaacatca gaaacgcact tgttaatcca tgggtttatt
     2641 accttatcag tcccgtgagg tttggtttgc cataaacgtg gccaacctta gatcgggcaa
     2701 cctcaaaaga gtcagggttc ttttcctgca ggccttcagt actcatgtgt ttaatgcaac
     2761 ttgaacttgg atcagctatt ttcccagcac tacaaaatat tgtctgggca tattttcagc
     2821 agtcagtaat ggagtccagc tctatcatgt ttcaaaaaat ggaatgttta gatcatctgc
     2881 atcaggtgat aggtttttgg taatactagg gaaagaaatg tctgtgcttt tattgaatat
     2941 gtacatataa caaataaaat atgttatcta aatgtc
//
