LOCUS       XM_008762122            6423 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus phospholipase A2, group IVF (Pla2g4f),
            mRNA.
ACCESSION   XM_008762122
VERSION     XM_008762122.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008762122.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6423
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6423
                     /gene="Pla2g4f"
                     /note="phospholipase A2, group IVF; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 2 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:691907"
                     /db_xref="RGD:1593370"
     CDS             1819..4401
                     /gene="Pla2g4f"
                     /codon_start=1
                     /product="cytosolic phospholipase A2 zeta"
                     /protein_id="XP_008760344.1"
                     /db_xref="GeneID:691907"
                     /db_xref="RGD:1593370"
                     /translation="MPWTLQPKWLASKGLPLLGAILLRETEKRETQWKHWRQETHPYY
                     DLQVKVLRARNIQHTDKLSKADCYVQLWLPTASFSPTQTRTVVNCSDPEWNETFHYRI
                     HSAVKNVLELALYDKDVLDSDKIFSVLFDLSTLQLGQPYTKTFTQKQPGLTDPKELQV
                     EFTLEKSQMPACEVITNGVLVAHPCLRIQGTVTGDKTASLGEFGSREIQLAVPGAYEK
                     PQSVPLQPTTVEPGLPATFIFHMNPVLSPRLNIALQEKLLVSHSGPSDELESQTSKME
                     EASILLSSLPLNQESTRLMNLEEGQQVTLRMKADMRSEDLDLRLGFELCSGELEFLDK
                     RKQVVSKALQQVMRLSEAPHCDQVPVIAVLGSGGGTRAMTSLYGSLAGLQELGLLDAV
                     TYLSGVSGSSWCISTLYKDPSWSQKTLQGPIRHASARVCSSKVGMLSPERFEYYTREK
                     KTWESRGHSMSFTDLWGLIIEYFLNQEENPAKLSDQQEMVSQGQNPYPIYASINVHNN
                     ISGEDFAEWCEFTPYEVGFPKYGAYVPTELFGSEFFMGRLLQHWPEPRICYLQGMWGS
                     AFAASLYEIFLKMRGPRLGFLDWHRGTVSVTDDWPKLRKQDPTRLPTRLFTSKSFFSK
                     AVLDIFTSRFTCAQTFNFTRGLCLYKDYTARKDFVVSEDAWHSDNYKHLDACPNQLTP
                     MKDFLSLVDGGFAINSPFPLILQPQRAVDLIVSFDYSLEAPFEVLQVTEKYCRDRGIP
                     FPRIEIDPKDSKDPRECYLFTEAEDPCSPIVLHFPLVNRTFRKHLAPGVERQTAEEKA
                     FGDFIINGPDTAYGMMDFTYEPIEFDRLVTLSRYNVLNNIETIRRALQLALDRRQAGG
                     RAGA"
ORIGIN      
        1 ctggctgtgg ctgtggctgt ggctggctgt ggctgtggct gactgtggct gtgactgtgg
       61 ctgtggctgg ctgtggctgt ggctggctgt ggctgtatgg ctgacatcac aagcacagac
      121 tatccccaca tcactccggg aatcccagag tctaacaaca cagcattgct ttgtgcctct
      181 taaagttcac ttatggccag aaggctcctg tgaagatatg gaattggtag gagtgaagga
      241 ctctgtttga aaagtgaaga tggctcactt ttcccagctc taaaatgcca gtttggtctc
      301 tcagtaattc cctcacccct agctgtctgt ctgtggccat cctgaagagc ttttgccaat
      361 gaaagtcatc tagaattttc agttgaggca tggggagatg gcttccgagc agagaatgtg
      421 gtttaagccc aaaagcactc aaccagctag tactgtgccc ctcttcccca aagccacaag
      481 ctttggactg tggatccaga tgctaacgct atccacaaga tcagcaaggg ggccggactt
      541 agctatctct gagtcagatc tcaactttac aatccatccg aggtgaaaca ggtcatcaca
      601 gttacatcac ctcaggtact ggaatttctg gtctgagctt ggcctgttag tcttggagtt
      661 aattcacctt tgtggatgtc gtgtcagcat ccagctgtat gtttggggga agacagtaga
      721 gactacctga tgaagatggg gtctcatctt gtacctcaaa ctgctttcat actgctgagt
      781 tcaagtgagc ctcctgcctc agaatgccaa gtcctgggct tctatgaacc actacccttg
      841 gctatgaaag tgttgtggtt aaagagtctc ccaacagttc actctcctgg aaacttcttt
      901 tgctagctac ctagatgact gtggtccatg ggaaaggaga tgacaagcag ttgcagttgg
      961 agctcagaat ggtcatgagc actttaaagc ctttatctgt ggcagtttta aggacagaga
     1021 agcctgcctc tcttctgtcc ttagttacac tacctggcca tgcccctgct tctatgcctg
     1081 aatcatcagg cacttctacc aacccaggaa gggagtcatg agatgaatct ttttaggcta
     1141 tgagtgactt ggagcatagt acagacatac catgtagcag gtcctttgtg ttaagggaat
     1201 agctaaggga ggccaaaaga gacacaagat gtcaccaagt ccccataaaa ccctgagcca
     1261 gagatttcca tgtttctgct taagagctgt agagaaattg ggacttgaag gagaaatagt
     1321 gtggggcttt ctggcagcta gatgaggtta gccctaatta tagtacctcc tgacttctgc
     1381 taaaggcaga ctagttggaa acaggaatat ctaggctctt gccctaccca gggcaaggga
     1441 tgggagtggt gtgagggagt ggtgtctgtt tttcacaact agctcacagt taagccaggc
     1501 ctgagttgga gaccagagtg ttaagcagga ccccaagaat ctcttagaaa gggactgcct
     1561 tgcctgttgg ctagggaaag caggctccac tcatttcctg gagcagttca aacccctcct
     1621 ggaggacttc aaacccctcc tccagcccca gtagccactc agcaccagcc cctcagcaca
     1681 gcagtggctc cacccttccc actcaagcgc tacttgtcag acctgagcga cagtgagacc
     1741 tgagcgacag tgaggatagc cggagaaaag tggctcgggg aagcaggtcc tctactggga
     1801 cctgagctgc tgctggccat gccctggact ctccagccga agtggctggc aagcaagggg
     1861 ctgccccttc ttggagctat actgctacgg gagacagaaa agagggaaac gcagtggaag
     1921 cattggcggc aggaaaccca cccatactac gaccttcaag tgaaggtgct gagggctaga
     1981 aacatccagc acacggataa attgtccaaa gctgactgct atgttcaact atggctgccc
     2041 acggcttctt ttagccccac tcagacaagg acagtggtta actgcagtga cccagagtgg
     2101 aatgagacct ttcactaccg gatccacagt gctgtgaaga atgtcctgga gctagctctt
     2161 tatgacaagg atgtcctgga cagtgacaag atcttctcag ttctgtttga cctgagtact
     2221 ctccagctag gccagcctta cacaaaaacc ttcactcaga agcagcctgg actaacagat
     2281 ccaaaagagc tgcaagtaga atttactctg gaaaagagtc agatgcctgc atgtgaagtc
     2341 atcaccaatg gtgtcctggt ggctcatccc tgtctgagaa ttcagggcac agtcactgga
     2401 gacaagacgg cctcacttgg agagtttggc tcgagggaga tccagctggc agtgcctggg
     2461 gcctatgaaa agccacagtc agtgcctctg cagccgacca ccgtggagcc aggtctccca
     2521 gcgaccttta tctttcacat gaacccggtg ctgagcccca ggctgaacat agcactgcag
     2581 gaaaagctcc tggtctcaca tagtggccca agtgatgagc tggagtccca gactagcaag
     2641 atggaggaag caagcatctt gctctcctct ctgcccctca accaggagtc aacaagactt
     2701 atgaacctgg aggagggcca gcaggtgacg ctgaggatga aggcagacat gaggtctgag
     2761 gacttagacc tgcgccttgg ttttgagctg tgtagtgggg agctggaatt tctggacaag
     2821 aggaagcagg tggtgtccaa ggccctgcag caggtgatgc gactgagtga ggctccacac
     2881 tgtgaccagg tacctgtgat agccgtgcta ggctctgggg gtggaaccag agccatgact
     2941 tccctgtacg gcagcctggc cgggctgcag gagcttggtc ttctggatgc tgtgacctac
     3001 ctgagtgggg tttctggatc ttcctggtgc atctctacac tctacaagga tccatcctgg
     3061 tcgcagaaga ctttgcaggg ccccattcga catgcctcgg ctcgagtctg cagcagtaaa
     3121 gtagggatgc tgtccccaga gcggttcgaa tactacaccc gggaaaagaa gacctgggag
     3181 agcagaggcc acagcatgtc cttcactgac ttgtggggcc tcatcattga gtatttcctc
     3241 aaccaggagg aaaaccctgc taagctgtca gaccaacaag aaatggtcag ccagggtcag
     3301 aacccttacc ccatctatgc cagcatcaat gtccacaaca acatcagtgg ggaagacttt
     3361 gcagagtggt gcgagttcac cccttatgag gtcggtttcc ccaagtacgg ggcttatgtc
     3421 cccacggaac tctttggctc tgagttcttc atgggtcggc tactgcagca ctggccagag
     3481 ccccgcatct gttacctgca gggtatgtgg ggaagtgctt ttgcagccag cctgtatgag
     3541 atcttcctga agatgagagg cccaagactg ggcttcctgg actggcacag aggcactgtc
     3601 agtgtcacag atgactggcc aaagttacgg aagcaggacc ccactcggct gcccaccagg
     3661 ctctttacct caaagagttt cttctctaag gctgtgctgg acatattcac ctcccgcttt
     3721 acttgtgccc agacctttaa ctttacccga ggtctctgcc tgtacaagga ctacacagct
     3781 agaaaggact ttgtggtctc tgaagatgca tggcattcag ataattacaa acacctcgat
     3841 gcctgtccca accagctcac acccatgaag gacttcctgt ccttagtgga tggaggcttt
     3901 gccatcaact caccattccc actgatcctg cagccgcagc gggctgtgga cctcattgtg
     3961 tcctttgact attccctgga agcccctttt gaggtcctgc aggtgacaga gaagtactgc
     4021 cgggaccgag ggatcccctt cccaaggatt gagatagacc ccaaggactc taaggacccc
     4081 cgtgaatgct atctgtttac tgaggcggag gacccctgct cgcccattgt gctgcatttt
     4141 ccccttgtca acaggacctt tcgcaaacac ctggctccag gagtggaacg acaaacagct
     4201 gaggagaagg ccttcgggga ctttatcatc aacgggccag atactgccta tggaatgatg
     4261 gacttcacct atgagcccat agagtttgat cgactggtga ccctgagtcg atacaatgtc
     4321 ttgaacaaca ttgagactat caggcgtgcc ctccagctgg ctctggaccg gcggcaggct
     4381 gggggaaggg ctggtgcctg accagatgaa agtcagagga gtgtgattag atgagatgga
     4441 ggaccttaag ccagaccaca ctgagggaga gtgaagactt taaggagttt ctgtttccca
     4501 cttctccttc ccagagggga tgggacagtt catctctctg agtgcttggg gattctgtgc
     4561 aggacagaac agagttcata ttttattggg gtatagagaa aaccagacag cagcttcatc
     4621 agagaaccca ctcctcacca cagaaggacc tctggaaaca acccaggtac tcagagcttc
     4681 accacagaga gctgtgggct gaggaaccag ctgtcctcct actgatacag aacggcaatg
     4741 gctcgcactt ccacagagtg cccagctctg acctgatccc ctggactcag tgatgtcagt
     4801 aaacaggatc tatgtgtgtt gccagcctgt gtccccaagc ccacacccta ctggttcttc
     4861 tctgcatcct aacctctcca cccctcctca gaggtcacca ggcttcccta ctaagcccat
     4921 gaaatgtgta ccaagatgac ccatcctgat gggtgtgcac attgctttac ccaaaccaca
     4981 ttttctgctc caatgcacag ctgccacact gcgcaaatac tgtctttcca tgctgaggag
     5041 acatgtgggt tgtttggctg gggcagagtg aatgggaaat tgcacacatt atatatgtgg
     5101 gtatatattc ccatctatgg tgggccagtt agtacctgtt ccttcacatt gggatgggca
     5161 aatgggggtg gggtgtggac ctagcctgaa ttcctgcctc tgatgagcta catgtgtccc
     5221 tctctttcac atttctcctg atccacttgg gacattccaa ttgagagctt ctccagaata
     5281 agtagatttc aaaactgtag agagaagatc cctcctggtc aggttgtctc cctctgattt
     5341 gtctccttgg cctcatcttc ctcaaccagc tgtgctcggt ccaagccacc tgatgctgta
     5401 taatagctga gcttctgtac tcagtggacc ccttgctcac atacacaagc accaagtgag
     5461 tgctccaaga ccacatttac aactcacaat tcctctttca gtcgggatgc ccctttctgg
     5521 gagtgtcacc tgccttaact ttaaagagaa ggccctagtt ctatggcctg tctataatag
     5581 tcaaagtccc atctgtgtcc tttatcccat gtgtgctgtg gctcaagcct cctgacgatg
     5641 tgacagtaaa gtagggctgg aggaacagtg cttcggactg acatgcagta aaccagcttg
     5701 gctcttcccc tctcttactg ctggctgtct ctggacacca cccaggcagc ccttggcttg
     5761 agtaatggta ggtttatttg gaaggttctg ctgtggccat tgtcaccact gcttgcgtgc
     5821 tatagctgat gacaatgttt attggactct cataatcgtt aggacttacc actcatagaa
     5881 tgtaaggcta gagtctttat tctgtcctca gggcttaggg gcttctgtgg ctctctatcc
     5941 tttttctcaa aatggggtct gcacactgga ttcactgcca ggtctgcttc aggccatgtt
     6001 ccttttccca gcatcccaac tttgtgctcc tgggactctc agtaaggctg gggacaattt
     6061 ttgcctgggt ttcatccggc accaagtgac ctgactgatc tgttttttct gcctccctga
     6121 gcctttattc tactttcttt tccttggttc cttaaacact tcagggggtt tcctgggagc
     6181 atctcagggt ctccgggttc ataaaaactt gttctttcag ggctggagag atggctcagt
     6241 ggttaagaac actgactgct cttccagagg tcctgagttc aattcccagc aaccacactg
     6301 tggctcacga ccatctgtaa tgggatccga tgcccccttc tggtgtgtct gaagagagtg
     6361 acagtggact catataaact aatgtactca tatacataaa ataagtaaat ctttaaaaac
     6421 aga
//
