LOCUS       NM_001107764            2812 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus phospholipase A2 group IVB (Pla2g4b), mRNA.
ACCESSION   NM_001107764 XM_001080878 XM_230486
VERSION     NM_001107764.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Ghosh,M., Loper,R., Ghomashchi,F., Tucker,D.E., Bonventre,J.V.,
            Gelb,M.H. and Leslie,C.C.
  TITLE     Function, activity, and membrane targeting of cytosolic
            phospholipase A(2)zeta in mouse lung fibroblasts
  JOURNAL   J Biol Chem 282 (16), 11676-11686 (2007)
   PUBMED   17293613
REFERENCE   2  (bases 1 to 2812)
  AUTHORS   Song,C., Chang,X.J., Bean,K.M., Proia,M.S., Knopf,J.L. and
            Kriz,R.W.
  TITLE     Molecular characterization of cytosolic phospholipase A2-beta
  JOURNAL   J Biol Chem 274 (24), 17063-17067 (1999)
   PUBMED   10358058
REFERENCE   3  (bases 1 to 2812)
  AUTHORS   Pickard,R.T., Strifler,B.A., Kramer,R.M. and Sharp,J.D.
  TITLE     Molecular cloning of two new human paralogs of 85-kDa cytosolic
            phospholipase A2
  JOURNAL   J Biol Chem 274 (13), 8823-8831 (1999)
   PUBMED   10085124
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000003.1.
            
            On Feb 16, 2008 this sequence version replaced NM_001107764.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643294.14667.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMN06680442
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-73                JAXUCZ010000003.1  127459273-127459345
            74-170              JAXUCZ010000003.1  127460407-127460503
            171-307             JAXUCZ010000003.1  127460754-127460890
            308-436             JAXUCZ010000003.1  127461013-127461141
            437-477             JAXUCZ010000003.1  127461423-127461463
            478-520             JAXUCZ010000003.1  127461617-127461659
            521-575             JAXUCZ010000003.1  127461879-127461933
            576-706             JAXUCZ010000003.1  127462131-127462261
            707-790             JAXUCZ010000003.1  127462499-127462582
            791-828             JAXUCZ010000003.1  127462791-127462828
            829-964             JAXUCZ010000003.1  127463489-127463624
            965-1101            JAXUCZ010000003.1  127464280-127464416
            1102-1324           JAXUCZ010000003.1  127464624-127464846
            1325-1442           JAXUCZ010000003.1  127464940-127465057
            1443-1580           JAXUCZ010000003.1  127465333-127465470
            1581-1685           JAXUCZ010000003.1  127465562-127465666
            1686-1865           JAXUCZ010000003.1  127465824-127466003
            1866-2032           JAXUCZ010000003.1  127466132-127466298
            2033-2219           JAXUCZ010000003.1  127466775-127466961
            2220-2812           JAXUCZ010000003.1  127467045-127467637
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..2812
                     /gene="Pla2g4b"
                     /note="phospholipase A2 group IVB"
                     /db_xref="GeneID:311341"
                     /db_xref="RGD:1308658"
     exon            1..73
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     CDS             65..2440
                     /gene="Pla2g4b"
                     /EC_number="3.1.1.4"
                     /note="phospholipase A2, group IVB (cytosolic)"
                     /codon_start=1
                     /product="cytosolic phospholipase A2 beta"
                     /protein_id="NP_001101234.2"
                     /db_xref="GeneID:311341"
                     /db_xref="RGD:1308658"
                     /translation="MALQTCPVYMQAKVPETHLLTVRVLQASGLPSKDLVTSSDCYVT
                     LNLPTASSGTLQTRTVKNSRNPVWNQNFHFRIHRQLKNVMELKVFDQDLMTKDDPVLS
                     VLFDVGTLQVGTQRQSFSLSAQEDGRLEVEFRLQTLTDCEEQLISNGILVAQELSCLH
                     VELKRTGDPKRSERKVQLVVAAACEGPQEAPVGTGSFRFHYPACWEQELSVHLQDDPH
                     EQLKVPLRTLPSSQLVRLVFPTSQEPLMRLELKKEDGPKELAVRLGCGPCPEEQAFLS
                     KRKQVVAAALKKALQLDQDLQEDEIPVIAVMATGGGIRAMTSLYGQLAGLKELGLLDC
                     ISYITGASGSTWALANLYEDPEWSQKDLAGPTEMLKTQVTKSKLGALAPSQLWRYRQE
                     LAERARLGYPTCFTNLWALINEALLHDKPHEHKLSDQREALSRGQNPLPIYCALNSKE
                     KGLSTFEFGEWCEFSPYEVGFPKYGAFIPSELFGSEFFMGRLVKQLPESRICFLEGIW
                     SNLFAASLQDSFYWSSEPSQFWDRWAQDQANLDKEQVSHLKIAEPPTAAGKIAELFTD
                     LLTKRPLAQATHNFMRGLHFHKDYFHHPHFSTWKASKLDKFPNQLTPAEPHLCLLDVG
                     YFINTSCPPLLQPTRDVDLILSLDYNLSGAFQQLQLVSRFCQEQGIPFPSISPSPEEQ
                     RQPQECHMFCDPAQPEAPAVLHFPLVNDSFRDHSAPGVPRTSEEKTAGEVNLSSSNSP
                     YDYTKVTYSQEDVDKLLRLTHYNICNNQDRLREAMHQAVQRRRNRRQFRRE"
     exon            74..170
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            171..307
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            308..436
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            437..477
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            478..520
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            521..575
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            576..706
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            707..790
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            791..828
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            829..964
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            965..1101
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            1102..1324
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            1325..1442
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            1443..1580
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            1581..1685
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            1686..1865
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            1866..2032
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            2033..2219
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
     exon            2220..2812
                     /gene="Pla2g4b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aaagctgaca gttgttggtc ctgtggccac tgccccatca tcccgttcct gtggatttgg
       61 tctcatggct ctgcaaacct gcccggtcta catgcaggca aaggtgccag agacacacct
      121 gctcactgtc cgcgtcctcc aggctagtgg cctgccttcc aaggacctag tgacatcctc
      181 tgactgctat gtgactctga acctgcccac ggcctccagc ggcacgctcc agacacgcac
      241 agtcaagaac agcagaaacc cagtctggaa tcagaacttc cacttccgga tccataggca
      301 gctcaagaat gttatggaac tgaaagtctt tgaccaggac ctgatgacca aagatgaccc
      361 agtgttgtca gtgctgtttg acgtggggac tctgcaagtt gggactcagc gccagagctt
      421 ctcattgagc gctcaggagg atgggcgctt ggaagttgag tttcggctac agactctgac
      481 agactgtgag gaacagctta tcagcaatgg tatcctggtg gcccaggagc tctcctgctt
      541 gcatgttgaa ctgaagagga caggagaccc aaagaggtca gagcgcaaag ttcaacttgt
      601 ggttgctgcg gcctgcgagg gtccacagga agcccctgtg ggcaccgggt ctttccgctt
      661 ccattatcca gcctgctggg agcaagagct cagtgttcat ctgcaggatg acccccatga
      721 gcagctgaag gtgccattgc gaactctacc ctcttcgcag ctggtgagac ttgtcttccc
      781 cacgtcccag gagccactga tgaggttgga actcaagaaa gaagacgggc caaaggagct
      841 ggccgtgcgg ctgggctgtg ggccctgccc cgaggaacag gccttcctaa gcaagaggaa
      901 gcaggtggtg gccgccgccc tgaaaaaggc cttacagctg gaccaagacc tgcaggagga
      961 cgagatccca gtgattgctg tgatggccac tggtggtggg atccgggcga tgacttcgtt
     1021 atacggacag ctggctggcc tgaaggagct tggccttctg gactgcatct cctacatcac
     1081 tggggcttca gggtccacat gggcattggc caatctctat gaggacccag agtggtctca
     1141 gaaggaccta gcagggccca ctgagatgct gaagacccag gtaacaaaga gcaaactggg
     1201 cgcattggcc cccagccagc tttggcggta ccggcaagag ctggctgagc gtgctcgcct
     1261 gggctaccca acctgcttca ccaacctgtg ggcccttatt aatgaggcct tgctgcacga
     1321 caagccacat gaacacaaac tctcagatca acgagaggcc ctgagtcgag gccagaaccc
     1381 tctgcctatc tactgtgccc ttaatagcaa ggagaagggc ctaagcacct ttgaatttgg
     1441 cgaatggtgc gagttctctc cctacgaagt cggcttcccc aagtacggag ccttcatccc
     1501 ctctgagctc tttggttctg agtttttcat ggggcggctg gtgaagcagc tccctgagtc
     1561 tcgcatttgc ttcctggaag gtatctggag caatctgttt gcagccagcc tccaagacag
     1621 cttctactgg tcctctgaac ccagccagtt ctgggaccgc tgggcccagg atcaggccaa
     1681 tctggacaaa gagcaggtct cccatctgaa gatagcagaa cctcccacag cggctggcaa
     1741 gatcgcagag ctcttcactg acctcctgac aaagcgcccc ctcgcccagg ccacccacaa
     1801 cttcatgcgc ggtctccatt tccacaagga ctatttccac caccctcact tctccacctg
     1861 gaaagcttcc aaactagaca agttccccaa ccagctgaca cccgccgagc cccacctctg
     1921 cctcctggat gttggctatt tcatcaacac tagttgccca cccctccttc agccaacacg
     1981 ggatgtggac ctcatcttgt cactggacta caacctctcc ggagcctttc agcagctgca
     2041 gcttgtgagc cggttctgcc aggagcaggg cattcctttc ccatccatct cgcccagccc
     2101 tgaggagcag cgtcagcctc aggagtgcca tatgttctgt gacccagccc agcccgaagc
     2161 cccagctgtg ttgcacttcc ccctggtcaa tgactccttc agggaccact cagcccctgg
     2221 ggtgccacgg acgtcggagg agaagacagc tggggaggtg aatctgtctt cctccaactc
     2281 cccatatgac tacacaaaag tgacctacag ccaggaagat gtggacaagc tgttacgact
     2341 gacgcattac aacatctgca acaaccagga tcggctgcgg gaggccatgc accaggccgt
     2401 gcagcggcgg agaaaccgca gacagtttag gcgggagtga cagctgaggt accctggctg
     2461 gactcctcct gggtcactct tgatcttcag ctccttcccc ttctgcactc agttcaagac
     2521 cagcatcacc atgtgctcca gaggccctga ggactctgat gtccaggcac agctccacaa
     2581 agatgtgtgt ctgggacctc ataggtgacg ctaacctgtc agcagccctg tcacagagtc
     2641 tagactggaa gctgcaagca gtggtgctat ggctgtcgtt catggatgga ctaggggctt
     2701 gttagagatg ggagcagtgt tggctgcaca atgggacact gcagcatgga acactttact
     2761 gtgacagggg ctcttataaa cgggaggcgt ttgtgacgct gtcccaagac ca
//
